RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 LHBP01229 141 aa11.27□□□□□ -0.6
BRCA1-209ENST00000470026 EDDM3BP56851 147 aa11.27□□□□□ -0.6
BRCA1-209ENST00000470026 ERVK-16P61578 105 aa11.27□□□□□ -0.6
BRCA1-209ENST00000470026 FOXL1Q12952 345 aa11.27□□□□□ -0.6
BRCA1-209ENST00000470026 LTC4SQ16873 150 aa11.27□□□□□ -0.6
BRCA1-209ENST00000470026 RPL39P5Q59GN2 51 aa11.27□□□□□ -0.6
BRCA1-209ENST00000470026 BHLHA15Q7RTS1 189 aaPredicted RBP11.27□□□□□ -0.6
BRCA1-209ENST00000470026 TMEM140Q9NV12 185 aa11.27□□□□□ -0.6
BRCA1-209ENST00000470026 COL6A3P12111 3177 aa11.27□□□□□ -0.6
BRCA1-209ENST00000470026 TET2Q6N021 2002 aaPredicted RBP11.27□□□□□ -0.6
BRCA1-209ENST00000470026 TRAV3A0A0B4J244 114 aa11.27□□□□□ -0.61
BRCA1-209ENST00000470026 NDUFB4O95168 129 aa11.27□□□□□ -0.61
BRCA1-209ENST00000470026 IGHV3-13P01766 116 aa11.27□□□□□ -0.61
BRCA1-209ENST00000470026 CRYAAP02489 173 aa11.27□□□□□ -0.61
BRCA1-209ENST00000470026 IL3RAP26951 378 aa11.27□□□□□ -0.61
BRCA1-209ENST00000470026 SRSF6Q13247 344 aaKnown RBP11.27□□□□□ -0.61
BRCA1-209ENST00000470026 C1orf229Q6ZS94 237 aaPredicted RBP11.27□□□□□ -0.61
BRCA1-209ENST00000470026 REC114Q7Z4M0 266 aa11.27□□□□□ -0.61
BRCA1-209ENST00000470026 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.27□□□□□ -0.61
BRCA1-209ENST00000470026 S1PR3Q99500 378 aa11.27□□□□□ -0.61
BRCA1-209ENST00000470026 OPN3Q9H1Y3 402 aaPredicted RBP11.27□□□□□ -0.61
BRCA1-209ENST00000470026 PROCRQ9UNN8 238 aa11.27□□□□□ -0.61
BRCA1-209ENST00000470026 TCF19Q9Y242 345 aa11.27□□□□□ -0.61
BRCA1-209ENST00000470026 PXMP4Q9Y6I8 212 aa11.27□□□□□ -0.61
BRCA1-209ENST00000470026 CXorf1O96002 111 aa11.26□□□□□ -0.61
BRCA1-209ENST00000470026 DDTP30046 118 aa11.26□□□□□ -0.61
BRCA1-209ENST00000470026 RAB7AP51149 207 aa11.26□□□□□ -0.61
BRCA1-209ENST00000470026 SEM1Q6ZVN7 128 aa11.26□□□□□ -0.61
BRCA1-209ENST00000470026 SSX9Q7RTT3 188 aa11.26□□□□□ -0.61
BRCA1-209ENST00000470026 PATZ1Q9HBE1 687 aaKnown RBP11.26□□□□□ -0.61
BRCA1-209ENST00000470026 HEYLQ9NQ87 328 aaPredicted RBP11.26□□□□□ -0.61
BRCA1-209ENST00000470026 CALYQ9NYX4 217 aa11.26□□□□□ -0.61
BRCA1-209ENST00000470026 FUT9Q9Y231 359 aa11.26□□□□□ -0.61
BRCA1-209ENST00000470026 MBD3L4A6NDZ8 208 aaPredicted RBP11.26□□□□□ -0.61
BRCA1-209ENST00000470026 MBD3L3A6NE82 208 aaPredicted RBP11.26□□□□□ -0.61
BRCA1-209ENST00000470026 MBD3L5A6NJ08 208 aaPredicted RBP11.26□□□□□ -0.61
BRCA1-209ENST00000470026 C15orf61A6NNL5 157 aa11.26□□□□□ -0.61
BRCA1-209ENST00000470026 TSTD3H0UI37 97 aa11.26□□□□□ -0.61
BRCA1-209ENST00000470026 GCGP01275 180 aa11.26□□□□□ -0.61
BRCA1-209ENST00000470026 ARL14EPLP0DKL9 152 aa11.26□□□□□ -0.61
BRCA1-209ENST00000470026 CHRNA7P36544 502 aa11.26□□□□□ -0.61
BRCA1-209ENST00000470026 C17orf58Q2M2W7 97 aa11.26□□□□□ -0.61
BRCA1-209ENST00000470026 C3orf36Q3SXR2 165 aa11.26□□□□□ -0.61
BRCA1-209ENST00000470026 CST9LP1Q5W188 147 aa11.26□□□□□ -0.61
BRCA1-209ENST00000470026 LRP11Q86VZ4 500 aa11.26□□□□□ -0.61
BRCA1-209ENST00000470026 VKORC1L1Q8N0U8 176 aa11.26□□□□□ -0.61
BRCA1-209ENST00000470026 ABHD12Q8N2K0 398 aa11.26□□□□□ -0.61
BRCA1-209ENST00000470026 ZNF114Q8NC26 417 aa11.26□□□□□ -0.61
BRCA1-209ENST00000470026 OR4S2Q8NH73 311 aa11.26□□□□□ -0.61
BRCA1-209ENST00000470026 MBD3L2Q8NHZ7 208 aaPredicted RBP11.26□□□□□ -0.61
BRCA1-209ENST00000470026 DERL1Q9BUN8 251 aa11.26□□□□□ -0.61
BRCA1-209ENST00000470026 FOXA2Q9Y261 457 aaPredicted RBP11.26□□□□□ -0.61
BRCA1-209ENST00000470026 WDFY4Q6ZS81 3184 aa11.25□□□□□ -0.61
BRCA1-209ENST00000470026 TRBV20OR9-2A0A075B6H5 130 aa11.25□□□□□ -0.61
BRCA1-209ENST00000470026 SLC31A2O15432 143 aa11.25□□□□□ -0.61
BRCA1-209ENST00000470026 WT1P19544 449 aaPredicted RBP11.25□□□□□ -0.61
BRCA1-209ENST00000470026 UBE2G2P60604 165 aa11.25□□□□□ -0.61
BRCA1-209ENST00000470026 POU2AF1Q16633 256 aa11.25□□□□□ -0.61
BRCA1-209ENST00000470026 CLEC12BQ2HXU8 276 aa11.25□□□□□ -0.61
BRCA1-209ENST00000470026 SPRNQ5BIV9 151 aa11.25□□□□□ -0.61
BRCA1-209ENST00000470026 FAM78BQ5VT40 261 aa11.25□□□□□ -0.61
BRCA1-209ENST00000470026 MIC13Q5XKP0 118 aa11.25□□□□□ -0.61
BRCA1-209ENST00000470026 PIP4P1Q86T03 277 aa11.25□□□□□ -0.61
BRCA1-209ENST00000470026 FAM222BQ8WU58 562 aa11.25□□□□□ -0.61
BRCA1-209ENST00000470026 TMEM37Q8WXS4 190 aa11.25□□□□□ -0.61
BRCA1-209ENST00000470026 NPVFQ9HCQ7 196 aa11.25□□□□□ -0.61
BRCA1-209ENST00000470026 ASCL3Q9NQ33 180 aa11.25□□□□□ -0.61
BRCA1-209ENST00000470026 TMEM14BQ9NUH8 114 aa11.25□□□□□ -0.61
BRCA1-209ENST00000470026 FNDC10F2Z333 226 aa11.24□□□□□ -0.61
BRCA1-209ENST00000470026 C1QTNF9P0C862 333 aa11.24□□□□□ -0.61
BRCA1-209ENST00000470026 ARSJQ5FYB0 599 aaPredicted RBP11.24□□□□□ -0.61
BRCA1-209ENST00000470026 ZNRF1Q8ND25 227 aa11.24□□□□□ -0.61
BRCA1-209ENST00000470026 PLPPR2Q96GM1 343 aa11.24□□□□□ -0.61
BRCA1-209ENST00000470026 NCOR1O75376 2440 aa11.24□□□□□ -0.61
BRCA1-209ENST00000470026 IGLV3-9A0A075B6K5 115 aa11.24□□□□□ -0.61
BRCA1-209ENST00000470026 IGHV3OR15-7A0A075B7D8 119 aa11.24□□□□□ -0.61
BRCA1-209ENST00000470026 IL6RP08887 468 aaPredicted RBP11.24□□□□□ -0.61
BRCA1-209ENST00000470026 GATA4P43694 442 aa11.24□□□□□ -0.61
BRCA1-209ENST00000470026 CT45A1Q5HYN5 189 aa11.24□□□□□ -0.61
BRCA1-209ENST00000470026 UTF1Q5T230 341 aa11.24□□□□□ -0.61
BRCA1-209ENST00000470026 CT45A3Q8NHU0 189 aa11.24□□□□□ -0.61
BRCA1-209ENST00000470026 C11orf52Q96A22 123 aa11.24□□□□□ -0.61
BRCA1-209ENST00000470026 SFRP2Q96HF1 295 aa11.24□□□□□ -0.61
BRCA1-209ENST00000470026 RHOVQ96L33 236 aa11.24□□□□□ -0.61
BRCA1-209ENST00000470026 OR2V2Q96R30 315 aa11.24□□□□□ -0.61
BRCA1-209ENST00000470026 TMEM204Q9BSN7 226 aa11.24□□□□□ -0.61
BRCA1-209ENST00000470026 RAB9BQ9NP90 201 aa11.24□□□□□ -0.61
BRCA1-209ENST00000470026 INTS1Q8N201 2190 aaKnown RBP11.24□□□□□ -0.61
BRCA1-209ENST00000470026 DSCAML1Q8TD84 2053 aa11.24□□□□□ -0.61
BRCA1-209ENST00000470026 GLRXP35754 106 aa11.23□□□□□ -0.61
BRCA1-209ENST00000470026 RPL29P47914 159 aaKnown RBP11.23□□□□□ -0.61
BRCA1-209ENST00000470026 THBS3P49746 956 aa11.23□□□□□ -0.61
BRCA1-209ENST00000470026 CNN1P51911 297 aaKnown RBP11.23□□□□□ -0.61
BRCA1-209ENST00000470026 HSPE1P61604 102 aaKnown RBP11.23□□□□□ -0.61
BRCA1-209ENST00000470026 PRSS8Q16651 343 aa11.23□□□□□ -0.61
BRCA1-209ENST00000470026 ZNF439Q8NDP4 499 aa11.23□□□□□ -0.61
BRCA1-209ENST00000470026 FAM234AQ9H0X4 552 aa11.23□□□□□ -0.61
BRCA1-209ENST00000470026 LINC00574Q9H8X3 128 aa11.23□□□□□ -0.61
BRCA1-209ENST00000470026 ELOVL5Q9NYP7 299 aa11.23□□□□□ -0.61
BRCA1-209ENST00000470026 A0A087X0M5 115 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms