RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 ZNF835Q9Y2P0 537 aa7.55□□□□□ -1.2
SMARCE1-207ENST00000469334 DNAH12Q6ZR08 3092 aa7.55□□□□□ -1.2
SMARCE1-207ENST00000469334 OTOL1A6NHN0 477 aaPredicted RBP7.54□□□□□ -1.2
SMARCE1-207ENST00000469334 C22orf46C9J442 243 aa7.54□□□□□ -1.2
SMARCE1-207ENST00000469334 J3QR89 54 aa7.54□□□□□ -1.2
SMARCE1-207ENST00000469334 DHHO43323 396 aa7.54□□□□□ -1.2
SMARCE1-207ENST00000469334 OR5AL1P0C617 328 aa7.54□□□□□ -1.2
SMARCE1-207ENST00000469334 FTH1P19P0C7X4 201 aa7.54□□□□□ -1.2
SMARCE1-207ENST00000469334 COX8AP10176 69 aa7.54□□□□□ -1.2
SMARCE1-207ENST00000469334 PLA2G5P39877 138 aa7.54□□□□□ -1.2
SMARCE1-207ENST00000469334 RAB31Q13636 194 aa7.54□□□□□ -1.2
SMARCE1-207ENST00000469334 KRTAP27-1Q3LI81 207 aa7.54□□□□□ -1.2
SMARCE1-207ENST00000469334 TMEM97Q5BJF2 176 aa7.54□□□□□ -1.2
SMARCE1-207ENST00000469334 CENPWQ5EE01 88 aa7.54□□□□□ -1.2
SMARCE1-207ENST00000469334 WDR74Q6RFH5 385 aaPredicted RBP7.54□□□□□ -1.2
SMARCE1-207ENST00000469334 FA2HQ7L5A8 372 aa7.54□□□□□ -1.2
SMARCE1-207ENST00000469334 SPATA12Q7Z6I5 190 aa7.54□□□□□ -1.2
SMARCE1-207ENST00000469334 BPIFA4PQ86YQ2 179 aa7.54□□□□□ -1.2
SMARCE1-207ENST00000469334 SPACA3Q8IXA5 215 aa7.54□□□□□ -1.2
SMARCE1-207ENST00000469334 RNF138Q8WVD3 245 aa7.54□□□□□ -1.2
SMARCE1-207ENST00000469334 PATE1Q8WXA2 126 aa7.54□□□□□ -1.2
SMARCE1-207ENST00000469334 DPF1Q92782 380 aa7.54□□□□□ -1.2
SMARCE1-207ENST00000469334 IGLV3-32A0A0A0MS00 114 aa7.54□□□□□ -1.2
SMARCE1-207ENST00000469334 H3BMH7 237 aa7.54□□□□□ -1.2
SMARCE1-207ENST00000469334 M0R296 226 aa7.54□□□□□ -1.2
SMARCE1-207ENST00000469334 SYNGR3O43761 229 aa7.54□□□□□ -1.2
SMARCE1-207ENST00000469334 EFNA2O43921 213 aa7.54□□□□□ -1.2
SMARCE1-207ENST00000469334 IGLV2-14P01704 120 aa7.54□□□□□ -1.2
SMARCE1-207ENST00000469334 HIST1H1EP10412 219 aaKnown RBP7.54□□□□□ -1.2
SMARCE1-207ENST00000469334 DEFA4P12838 97 aa7.54□□□□□ -1.2
SMARCE1-207ENST00000469334 OTX2P32243 289 aa7.54□□□□□ -1.2
SMARCE1-207ENST00000469334 RAB9AP51151 201 aa7.54□□□□□ -1.2
SMARCE1-207ENST00000469334 CKS1BP61024 79 aa7.54□□□□□ -1.2
SMARCE1-207ENST00000469334 SLAQ13239 276 aa7.54□□□□□ -1.2
SMARCE1-207ENST00000469334 FAM120AOSQ5T036 256 aa7.54□□□□□ -1.2
SMARCE1-207ENST00000469334 FAM27BQ5VT28 67 aa7.54□□□□□ -1.2
SMARCE1-207ENST00000469334 SLC35E4Q6ICL7 350 aa7.54□□□□□ -1.2
SMARCE1-207ENST00000469334 ZBTB34Q8NCN2 500 aa7.54□□□□□ -1.2
SMARCE1-207ENST00000469334 VSTM2AQ8TAG5 236 aa7.54□□□□□ -1.2
SMARCE1-207ENST00000469334 FNDC4Q9H6D8 234 aaPredicted RBP7.54□□□□□ -1.2
SMARCE1-207ENST00000469334 TECRQ9NZ01 308 aaKnown RBP7.54□□□□□ -1.2
SMARCE1-207ENST00000469334 KCNIP1Q9NZI2 227 aa7.54□□□□□ -1.2
SMARCE1-207ENST00000469334 CRIM1Q9NZV1 1036 aa7.54□□□□□ -1.2
SMARCE1-207ENST00000469334 hDV102S1A0JD36 115 aa7.53□□□□□ -1.2
SMARCE1-207ENST00000469334 HELTA6NFD8 242 aa7.53□□□□□ -1.2
SMARCE1-207ENST00000469334 RHBDL1O75783 438 aa7.53□□□□□ -1.2
SMARCE1-207ENST00000469334 LINC00271P0C7V0 271 aa7.53□□□□□ -1.2
SMARCE1-207ENST00000469334 EDDM3BP56851 147 aa7.53□□□□□ -1.2
SMARCE1-207ENST00000469334 YPEL5P62699 121 aa7.53□□□□□ -1.2
SMARCE1-207ENST00000469334 CD300EQ496F6 205 aaPredicted RBP7.53□□□□□ -1.2
SMARCE1-207ENST00000469334 SFTPA2Q8IWL1 248 aa7.53□□□□□ -1.2
SMARCE1-207ENST00000469334 OR10AG1Q8NH19 301 aa7.53□□□□□ -1.2
SMARCE1-207ENST00000469334 FAM222BQ8WU58 562 aa7.53□□□□□ -1.2
SMARCE1-207ENST00000469334 GRAMD2BQ96HH9 432 aa7.53□□□□□ -1.2
SMARCE1-207ENST00000469334 SPAG17Q6Q759 2223 aa7.53□□□□□ -1.2
SMARCE1-207ENST00000469334 A0A087X0K7 114 aa7.52□□□□□ -1.2
SMARCE1-207ENST00000469334 F2RL2O00254 374 aa7.52□□□□□ -1.2
SMARCE1-207ENST00000469334 WISP2O76076 250 aa7.52□□□□□ -1.2
SMARCE1-207ENST00000469334 BCL3P20749 454 aa7.52□□□□□ -1.2
SMARCE1-207ENST00000469334 TM4SF4P48230 202 aa7.52□□□□□ -1.2
SMARCE1-207ENST00000469334 FOXL2P58012 376 aa7.52□□□□□ -1.2
SMARCE1-207ENST00000469334 HHEXQ03014 270 aa7.52□□□□□ -1.2
SMARCE1-207ENST00000469334 GABRA6Q16445 453 aa7.52□□□□□ -1.2
SMARCE1-207ENST00000469334 C5orf64Q2M2E5 130 aa7.52□□□□□ -1.2
SMARCE1-207ENST00000469334 PDLIM3Q53GG5 364 aaPredicted RBP7.52□□□□□ -1.2
SMARCE1-207ENST00000469334 IBA57Q5T440 356 aaKnown RBP7.52□□□□□ -1.2
SMARCE1-207ENST00000469334 C2orf91Q6ZV80 131 aa7.52□□□□□ -1.2
SMARCE1-207ENST00000469334 ATP5L2Q7Z4Y8 100 aa7.52□□□□□ -1.2
SMARCE1-207ENST00000469334 ZNF645Q8N7E2 425 aa7.52□□□□□ -1.2
SMARCE1-207ENST00000469334 OR2T6Q8NHC8 308 aa7.52□□□□□ -1.2
SMARCE1-207ENST00000469334 PIGCQ92535 297 aa7.52□□□□□ -1.2
SMARCE1-207ENST00000469334 FER1L6-AS2Q96M78 137 aa7.52□□□□□ -1.2
SMARCE1-207ENST00000469334 JMJD8Q96S16 334 aa7.52□□□□□ -1.2
SMARCE1-207ENST00000469334 SPATA25Q9BR10 227 aa7.52□□□□□ -1.2
SMARCE1-207ENST00000469334 CHRNA10Q9GZZ6 450 aa7.52□□□□□ -1.2
SMARCE1-207ENST00000469334 PCDH15Q96QU1 1955 aa7.52□□□□□ -1.21
SMARCE1-207ENST00000469334 GTF3C1Q12789 2109 aa7.52□□□□□ -1.21
SMARCE1-207ENST00000469334 A0A0G2JLM5 398 aa7.52□□□□□ -1.21
SMARCE1-207ENST00000469334 SERTM2A0A1B0GWG4 89 aa7.52□□□□□ -1.21
SMARCE1-207ENST00000469334 RRHO14718 337 aa7.52□□□□□ -1.21
SMARCE1-207ENST00000469334 SPINK4O60575 86 aa7.52□□□□□ -1.21
SMARCE1-207ENST00000469334 ZG16O60844 167 aa7.52□□□□□ -1.21
SMARCE1-207ENST00000469334 GOSR1O95249 250 aa7.52□□□□□ -1.21
SMARCE1-207ENST00000469334 SMAGPQ0VAQ4 97 aa7.52□□□□□ -1.21
SMARCE1-207ENST00000469334 GCSAMLQ5JQS6 135 aa7.52□□□□□ -1.21
SMARCE1-207ENST00000469334 MKXQ8IYA7 352 aa7.52□□□□□ -1.21
SMARCE1-207ENST00000469334 C7orf61Q8IZ16 206 aa7.52□□□□□ -1.21
SMARCE1-207ENST00000469334 TMEM251Q8N6I4 163 aa7.52□□□□□ -1.21
SMARCE1-207ENST00000469334 MRAP2Q96G30 205 aa7.52□□□□□ -1.21
SMARCE1-207ENST00000469334 TMEM167BQ9NRX6 74 aa7.52□□□□□ -1.21
SMARCE1-207ENST00000469334 SLC25A10Q9UBX3 287 aaPredicted RBP7.52□□□□□ -1.21
SMARCE1-207ENST00000469334 KCNS2Q9ULS6 477 aa7.52□□□□□ -1.21
SMARCE1-207ENST00000469334 PPP1R3CQ9UQK1 317 aa7.52□□□□□ -1.21
SMARCE1-207ENST00000469334 C15orf62A8K5M9 175 aa7.51□□□□□ -1.21
SMARCE1-207ENST00000469334 C21orf140B9A014 251 aa7.51□□□□□ -1.21
SMARCE1-207ENST00000469334 LEPROTL1O95214 131 aa7.51□□□□□ -1.21
SMARCE1-207ENST00000469334 LIPFP07098 398 aa7.51□□□□□ -1.21
SMARCE1-207ENST00000469334 OR9G9P0C7N8 305 aa7.51□□□□□ -1.21
SMARCE1-207ENST00000469334 CRYBA4P53673 196 aa7.51□□□□□ -1.21
SMARCE1-207ENST00000469334 PQLC2Q6ZP29 291 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms