RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 ELF5Q9UKW6 265 aaPredicted RBP9.18□□□□□ -0.94
COL5A1-207ENST00000469093 ZNF257Q9Y2Q1 563 aa9.18□□□□□ -0.94
COL5A1-207ENST00000469093 A0A1B0GW64 132 aa9.17□□□□□ -0.94
COL5A1-207ENST00000469093 IFITM5A6NNB3 132 aa9.17□□□□□ -0.94
COL5A1-207ENST00000469093 IGHV3-23P01764 117 aa9.17□□□□□ -0.94
COL5A1-207ENST00000469093 SMIM18P0DKX4 95 aa9.17□□□□□ -0.94
COL5A1-207ENST00000469093 RAB6AP20340 208 aa9.17□□□□□ -0.94
COL5A1-207ENST00000469093 RPL30P62888 115 aaKnown RBP9.17□□□□□ -0.94
COL5A1-207ENST00000469093 ARFRP1Q13795 201 aa9.17□□□□□ -0.94
COL5A1-207ENST00000469093 TIMM50Q3ZCQ8 353 aa9.17□□□□□ -0.94
COL5A1-207ENST00000469093 ZNF57Q68EA5 555 aaPredicted RBP9.17□□□□□ -0.94
COL5A1-207ENST00000469093 SLC16A13Q7RTY0 426 aa9.17□□□□□ -0.94
COL5A1-207ENST00000469093 GPR141Q7Z602 305 aa9.17□□□□□ -0.94
COL5A1-207ENST00000469093 TMEM61Q8N0U2 210 aa9.17□□□□□ -0.94
COL5A1-207ENST00000469093 ZNF645Q8N7E2 425 aa9.17□□□□□ -0.94
COL5A1-207ENST00000469093 CCDC140Q96MF4 163 aa9.17□□□□□ -0.94
COL5A1-207ENST00000469093 FANCD2OSQ96PS1 177 aa9.17□□□□□ -0.94
COL5A1-207ENST00000469093 SLC2A9Q9NRM0 540 aa9.17□□□□□ -0.94
COL5A1-207ENST00000469093 NDUFB11Q9NX14 153 aa9.17□□□□□ -0.94
COL5A1-207ENST00000469093 SSR3Q9UNL2 185 aa9.17□□□□□ -0.94
COL5A1-207ENST00000469093 PRELID3BQ9Y3B1 194 aa9.17□□□□□ -0.94
COL5A1-207ENST00000469093 OR2W1Q9Y3N9 320 aa9.17□□□□□ -0.94
COL5A1-207ENST00000469093 S4R3C0 116 aa9.17□□□□□ -0.94
COL5A1-207ENST00000469093 TRAV1-2A0A0B4J238 106 aa9.16□□□□□ -0.94
COL5A1-207ENST00000469093 ZNF320A2RRD8 509 aa9.16□□□□□ -0.94
COL5A1-207ENST00000469093 TMEM213A2RRL7 107 aa9.16□□□□□ -0.94
COL5A1-207ENST00000469093 METTL21EPA6NDL7 271 aa9.16□□□□□ -0.94
COL5A1-207ENST00000469093 NPIPB5A8MRT5 1133 aa9.16□□□□□ -0.94
COL5A1-207ENST00000469093 NOL3O60936 208 aaKnown RBP9.16□□□□□ -0.94
COL5A1-207ENST00000469093 HLA-DQB1P01920 261 aa9.16□□□□□ -0.94
COL5A1-207ENST00000469093 CRYGCP07315 174 aa9.16□□□□□ -0.94
COL5A1-207ENST00000469093 CD36P16671 472 aa9.16□□□□□ -0.94
COL5A1-207ENST00000469093 NFYAP23511 347 aaPredicted RBP9.16□□□□□ -0.94
COL5A1-207ENST00000469093 MYL9P24844 172 aa9.16□□□□□ -0.94
COL5A1-207ENST00000469093 ARL3P36405 182 aa9.16□□□□□ -0.94
COL5A1-207ENST00000469093 BRWD1-AS2P59051 145 aa9.16□□□□□ -0.94
COL5A1-207ENST00000469093 KLK9Q2XQG4 91 aa9.16□□□□□ -0.94
COL5A1-207ENST00000469093 FAM106AQ4KMX7 169 aa9.16□□□□□ -0.94
COL5A1-207ENST00000469093 OR2B11Q5JQS5 317 aa9.16□□□□□ -0.94
COL5A1-207ENST00000469093 CLEC19AQ6UXS0 136 aa9.16□□□□□ -0.94
COL5A1-207ENST00000469093 KCTD9Q7L273 389 aa9.16□□□□□ -0.94
COL5A1-207ENST00000469093 UXS1Q8NBZ7 420 aa9.16□□□□□ -0.94
COL5A1-207ENST00000469093 TMEM167AQ8TBQ9 72 aa9.16□□□□□ -0.94
COL5A1-207ENST00000469093 LINC00476Q8WZB0 136 aa9.16□□□□□ -0.94
COL5A1-207ENST00000469093 FYTTD1Q96QD9 318 aaKnown RBP9.16□□□□□ -0.94
COL5A1-207ENST00000469093 OR2A7Q96R45 310 aa9.16□□□□□ -0.94
COL5A1-207ENST00000469093 ST6GALNAC5Q9BVH7 336 aa9.16□□□□□ -0.94
COL5A1-207ENST00000469093 MLXQ9UH92 298 aa9.16□□□□□ -0.94
COL5A1-207ENST00000469093 KLK9Q9UKQ9 250 aa9.16□□□□□ -0.94
COL5A1-207ENST00000469093 RBMX2Q9Y388 322 aaKnown RBP9.16□□□□□ -0.94
COL5A1-207ENST00000469093 LOC102724200A0A096LPH7 203 aaPredicted RBP9.15□□□□□ -0.94
COL5A1-207ENST00000469093 IGKV1D-13A0A0B4J2D9 117 aa9.15□□□□□ -0.94
COL5A1-207ENST00000469093 PDCD5O14737 125 aa9.15□□□□□ -0.94
COL5A1-207ENST00000469093 KBTBD11O94819 623 aa9.15□□□□□ -0.94
COL5A1-207ENST00000469093 SCAF4O95104 1147 aaKnown RBP9.15□□□□□ -0.94
COL5A1-207ENST00000469093 CTXN2P0C2S0 81 aa9.15□□□□□ -0.94
COL5A1-207ENST00000469093 ZNF735P0CB33 412 aa9.15□□□□□ -0.94
COL5A1-207ENST00000469093 IGKV1-13P0DP09 117 aa9.15□□□□□ -0.94
COL5A1-207ENST00000469093 AREGP15514 252 aa9.15□□□□□ -0.94
COL5A1-207ENST00000469093 DTYMKP23919 212 aa9.15□□□□□ -0.94
COL5A1-207ENST00000469093 PSMB6P28072 239 aa9.15□□□□□ -0.94
COL5A1-207ENST00000469093 RPL27AP46776 148 aaKnown RBP9.15□□□□□ -0.94
COL5A1-207ENST00000469093 EIF4EBP1Q13541 118 aaPredicted RBP9.15□□□□□ -0.94
COL5A1-207ENST00000469093 SSX1Q16384 188 aa9.15□□□□□ -0.94
COL5A1-207ENST00000469093 CDNFQ49AH0 187 aa9.15□□□□□ -0.94
COL5A1-207ENST00000469093 PUSL1Q8N0Z8 303 aaKnown RBP9.15□□□□□ -0.94
COL5A1-207ENST00000469093 OR52B4Q8NGK2 314 aa9.15□□□□□ -0.94
COL5A1-207ENST00000469093 VSTM2AQ8TAG5 236 aa9.15□□□□□ -0.94
COL5A1-207ENST00000469093 GGTLC1Q9BX51 225 aa9.15□□□□□ -0.94
COL5A1-207ENST00000469093 ATG5Q9H1Y0 275 aa9.15□□□□□ -0.94
COL5A1-207ENST00000469093 MRPS7Q9Y2R9 242 aaKnown RBP9.15□□□□□ -0.94
COL5A1-207ENST00000469093 TRDV1A0A1B0GX56 115 aa9.14□□□□□ -0.95
COL5A1-207ENST00000469093 DPPA5A6NC42 116 aa9.14□□□□□ -0.95
COL5A1-207ENST00000469093 A8MWP6 167 aa9.14□□□□□ -0.95
COL5A1-207ENST00000469093 SLC22A5O76082 557 aa9.14□□□□□ -0.95
COL5A1-207ENST00000469093 LY6G6CO95867 125 aa9.14□□□□□ -0.95
COL5A1-207ENST00000469093 CLEC3BP05452 202 aa9.14□□□□□ -0.95
COL5A1-207ENST00000469093 CTRB1P17538 263 aa9.14□□□□□ -0.95
COL5A1-207ENST00000469093 GALP22466 123 aa9.14□□□□□ -0.95
COL5A1-207ENST00000469093 MAS1LP35410 378 aa9.14□□□□□ -0.95
COL5A1-207ENST00000469093 RPL5P46777 297 aaKnown RBP9.14□□□□□ -0.95
COL5A1-207ENST00000469093 ANKRD55Q3KP44 614 aa9.14□□□□□ -0.95
COL5A1-207ENST00000469093 TM4SF20Q53R12 229 aa9.14□□□□□ -0.95
COL5A1-207ENST00000469093 CTRB2Q6GPI1 263 aa9.14□□□□□ -0.95
COL5A1-207ENST00000469093 NR2C2APQ86WQ0 139 aa9.14□□□□□ -0.95
COL5A1-207ENST00000469093 EEF1AKMT3Q96AZ1 226 aa9.14□□□□□ -0.95
COL5A1-207ENST00000469093 HSD17B10Q99714 261 aaKnown RBP9.14□□□□□ -0.95
COL5A1-207ENST00000469093 KRTAP17-1Q9BYP8 105 aa9.14□□□□□ -0.95
COL5A1-207ENST00000469093 SPATA2Q9UM82 520 aa9.14□□□□□ -0.95
COL5A1-207ENST00000469093 LOC100506127A0A0U1RQW1 187 aa9.13□□□□□ -0.95
COL5A1-207ENST00000469093 CGB1A6NKQ9 187 aa9.13□□□□□ -0.95
COL5A1-207ENST00000469093 DHFRP00374 187 aa9.13□□□□□ -0.95
COL5A1-207ENST00000469093 C8orf88P0DMB2 117 aa9.13□□□□□ -0.95
COL5A1-207ENST00000469093 MYOD1P15172 320 aa9.13□□□□□ -0.95
COL5A1-207ENST00000469093 RAB3BP20337 219 aa9.13□□□□□ -0.95
COL5A1-207ENST00000469093 EWSR1Q01844 656 aaKnown RBP eCLIP9.13□□□□□ -0.95
COL5A1-207ENST00000469093 ARL6IP1Q15041 203 aa9.13□□□□□ -0.95
COL5A1-207ENST00000469093 HACD4Q5VWC8 232 aa9.13□□□□□ -0.95
COL5A1-207ENST00000469093 CNIH2Q6PI25 160 aa9.13□□□□□ -0.95
COL5A1-207ENST00000469093 UNQ9165/PRO28630Q6UXU0 137 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms