RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 RIBC1Q8N443 379 aaPredicted RBP2.55□□□□□ -2
GPNMB-207ENST00000468723 DRAM1Q8N682 238 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 C15orf56Q8N910 161 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 OR6K3Q8NGY3 331 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 OR6N1Q8NGY5 312 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 DYDC1Q8WWB3 177 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 FLYWCH2Q96CP2 140 aaKnown RBP2.55□□□□□ -2
GPNMB-207ENST00000468723 METTL26Q96S19 204 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 STACQ99469 402 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 WFDC6Q9BQY6 131 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 RSPO3Q9BXY4 272 aaPredicted RBP2.55□□□□□ -2
GPNMB-207ENST00000468723 RPP21Q9H633 154 aaKnown RBP2.55□□□□□ -2
GPNMB-207ENST00000468723 HMG20AQ9NP66 347 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 ACER3Q9NUN7 267 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 NKIRAS1Q9NYS0 192 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 CELSR2Q9HCU4 2923 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 ITPR2Q14571 2701 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 TEP1Q99973 2627 aaKnown RBP2.55□□□□□ -2
GPNMB-207ENST00000468723 ABCA12Q86UK0 2595 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 USF3Q68DE3 2245 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 IGLV3-32A0A0A0MS00 114 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 KIR2DS1A0A191URI9 304 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 A0A1W2PQD3 144 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 FABP12A6NFH5 140 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 CPSF4LA6NMK7 179 aaKnown RBP2.54□□□□□ -2
GPNMB-207ENST00000468723 C5orf58C9J3I9 102 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 ATP6V1G2-DDX39BF2Z307 99 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 H3BQF6 201 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 ITGB1BP1O14713 200 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 UBDO15205 165 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 BIRC5O15392 142 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 TPST1O60507 370 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 CCDC22O60826 627 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 MRPL33O75394 65 aaKnown RBP2.54□□□□□ -2
GPNMB-207ENST00000468723 DHRS3O75911 302 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 YIF1AO95070 293 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 MT-ND4P03905 459 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 CRHP06850 196 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 PET100P0DJ07 73 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 ZNF823P16415 610 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 ZNF32P17041 273 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 PSMB2P49721 201 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 POLR2JP52435 117 aaKnown RBP2.54□□□□□ -2
GPNMB-207ENST00000468723 NAA20P61599 178 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 CD164Q04900 197 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 ZNF141Q15928 474 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 NCMAPQ5T1S8 102 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 C3orf33Q6P1S2 294 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 TMPPEQ6ZT21 453 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 KRTAP5-5Q701N2 237 aaPredicted RBP2.54□□□□□ -2
GPNMB-207ENST00000468723 SSX7Q7RTT5 188 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 AAED1Q7RTV5 226 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 MTERF4Q7Z6M4 381 aaKnown RBP2.54□□□□□ -2
GPNMB-207ENST00000468723 PGAM4Q8N0Y7 254 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 ZNF433Q8N7K0 673 aaPredicted RBP2.54□□□□□ -2
GPNMB-207ENST00000468723 OR4K5Q8NGD3 323 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 BLNKQ8WV28 456 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 RORBQ92753 470 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 TNFRSF14Q92956 283 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 CPNE4Q96A23 557 aaPredicted RBP2.54□□□□□ -2
GPNMB-207ENST00000468723 DDIT4LQ96D03 193 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 MUCL1Q96DR8 90 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 ZMYND19Q96E35 227 aaPredicted RBP2.54□□□□□ -2
GPNMB-207ENST00000468723 NEURL3Q96EH8 262 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 TAPBPLQ9BX59 468 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 NXF2Q9GZY0 626 aaKnown RBP2.54□□□□□ -2
GPNMB-207ENST00000468723 TPK1Q9H3S4 243 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 TPT1P8Q9HAU6 139 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 ABCB9Q9NP78 766 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 ZNF331Q9NQX6 463 aaPredicted RBP2.54□□□□□ -2
GPNMB-207ENST00000468723 CCDC167Q9P0B6 97 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 ZNF222Q9UK12 451 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 ZNF443Q9Y2A4 671 aaPredicted RBP2.54□□□□□ -2
GPNMB-207ENST00000468723 USH1CQ9Y6N9 552 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 ENPP4Q9Y6X5 453 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 MAST4O15021 2626 aa2.54□□□□□ -2
GPNMB-207ENST00000468723 ARID1AO14497 2285 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 APCP25054 2843 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 TEX15Q9BXT5 2789 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 UNC79Q9P2D8 2635 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 A0A096LNJ9 63 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 A0A0U1RQV1 116 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 A0A1B0GTI1 187 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 A0A1B0GX12 115 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 TMEM213A2RRL7 107 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 TCAPO15273 167 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 FOXH1O75593 365 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 ADAP1O75689 374 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 KRT75O95678 551 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 DBIP07108 87 aaKnown RBP2.53□□□□□ -2
GPNMB-207ENST00000468723 CD79AP11912 226 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 GRPRP30550 384 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 EIF1P41567 113 aaKnown RBP2.53□□□□□ -2
GPNMB-207ENST00000468723 IDH3GP51553 393 aaPredicted RBP2.53□□□□□ -2
GPNMB-207ENST00000468723 POLR2HP52434 150 aaKnown RBP2.53□□□□□ -2
GPNMB-207ENST00000468723 TAS2R31P59538 309 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 COPZ1P61923 177 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 ESRRGP62508 458 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 GLO1Q04760 184 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 C1DQ13901 141 aaKnown RBP2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms