RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 BRS3P32247 399 aa-0.94□□□□□ -2.56
SSB-208ENST00000468600 FXYD2P54710 66 aa-0.94□□□□□ -2.56
SSB-208ENST00000468600 MCM3APO60318 1980 aa-0.94□□□□□ -2.56
SSB-208ENST00000468600 PIEZO1Q92508 2521 aa-0.94□□□□□ -2.56
SSB-208ENST00000468600 ASXL3Q9C0F0 2248 aa-0.95□□□□□ -2.56
SSB-208ENST00000468600 KMT2CQ8NEZ4 4911 aaKnown RBP-0.95□□□□□ -2.56
SSB-208ENST00000468600 C21orf140B9A014 251 aa-0.95□□□□□ -2.56
SSB-208ENST00000468600 TMEM33P57088 247 aa-0.95□□□□□ -2.56
SSB-208ENST00000468600 C6orf183Q5T699 404 aa-0.95□□□□□ -2.56
SSB-208ENST00000468600 EXOC3-AS1Q8N2X6 119 aa-0.95□□□□□ -2.56
SSB-208ENST00000468600 PDCL2Q8N4E4 241 aa-0.95□□□□□ -2.56
SSB-208ENST00000468600 CDRT4Q8N9R6 151 aa-0.95□□□□□ -2.56
SSB-208ENST00000468600 SGMS2Q8NHU3 365 aa-0.95□□□□□ -2.56
SSB-208ENST00000468600 Q8WTZ3 238 aa-0.95□□□□□ -2.56
SSB-208ENST00000468600 TLCD1Q96CP7 247 aa-0.95□□□□□ -2.56
SSB-208ENST00000468600 FAM103A1Q9BTL3 118 aaKnown RBP-0.95□□□□□ -2.56
SSB-208ENST00000468600 PSME2Q9UL46 239 aa-0.95□□□□□ -2.56
SSB-208ENST00000468600 KIF27Q86VH2 1401 aa-0.96□□□□□ -2.56
SSB-208ENST00000468600 C10orf142B7Z368 130 aa-0.96□□□□□ -2.56
SSB-208ENST00000468600 STAG3L2P0CL84 134 aa-0.96□□□□□ -2.56
SSB-208ENST00000468600 DMTNQ08495 405 aa-0.96□□□□□ -2.56
SSB-208ENST00000468600 NKAIN1Q4KMZ8 207 aa-0.96□□□□□ -2.56
SSB-208ENST00000468600 AHSA2Q719I0 299 aa-0.96□□□□□ -2.56
SSB-208ENST00000468600 BORCS5Q969J3 196 aa-0.96□□□□□ -2.56
SSB-208ENST00000468600 C12orf43Q96C57 262 aaKnown RBP-0.96□□□□□ -2.56
SSB-208ENST00000468600 CMTM5Q96DZ9 223 aa-0.96□□□□□ -2.56
SSB-208ENST00000468600 CD300AQ9UGN4 299 aa-0.96□□□□□ -2.56
SSB-208ENST00000468600 EML6Q6ZMW3 1958 aa-0.97□□□□□ -2.56
SSB-208ENST00000468600 LINC00854A0A1B0GVQ3 168 aa-0.97□□□□□ -2.56
SSB-208ENST00000468600 GOLGA6L19H0YKK7 550 aa-0.97□□□□□ -2.56
SSB-208ENST00000468600 SNAP29O95721 258 aa-0.97□□□□□ -2.56
SSB-208ENST00000468600 HLA-DQB2P05538 268 aa-0.97□□□□□ -2.56
SSB-208ENST00000468600 XKRXQ6PP77 449 aa-0.97□□□□□ -2.56
SSB-208ENST00000468600 CIDECQ96AQ7 238 aaPredicted RBP-0.97□□□□□ -2.56
SSB-208ENST00000468600 NXT1Q9UKK6 140 aaKnown RBP-0.97□□□□□ -2.56
SSB-208ENST00000468600 TIMM22Q9Y584 194 aa-0.97□□□□□ -2.56
SSB-208ENST00000468600 U3KQA8 63 aa-0.97□□□□□ -2.56
SSB-208ENST00000468600 DENND4CQ5VZ89 1909 aa-0.97□□□□□ -2.57
SSB-208ENST00000468600 KIAA0232Q92628 1395 aa-0.97□□□□□ -2.57
SSB-208ENST00000468600 KDELR1P24390 212 aa-0.98□□□□□ -2.57
SSB-208ENST00000468600 ADORA1P30542 326 aa-0.98□□□□□ -2.57
SSB-208ENST00000468600 PDE6HQ13956 83 aa-0.98□□□□□ -2.57
SSB-208ENST00000468600 FLOT2Q14254 428 aa-0.98□□□□□ -2.57
SSB-208ENST00000468600 KRTAP19-8Q3LI54 63 aa-0.98□□□□□ -2.57
SSB-208ENST00000468600 AGR3Q8TD06 166 aa-0.98□□□□□ -2.57
SSB-208ENST00000468600 ZNHIT6Q9NWK9 470 aaKnown RBP-0.98□□□□□ -2.57
SSB-208ENST00000468600 TTC41PQ6P2S7 1318 aa-0.98□□□□□ -2.57
SSB-208ENST00000468600 GOLGA6L7A0A1B0GV03 622 aa-0.99□□□□□ -2.57
SSB-208ENST00000468600 F5H5K5 113 aa-0.99□□□□□ -2.57
SSB-208ENST00000468600 LIN7AO14910 233 aaPredicted RBP-0.99□□□□□ -2.57
SSB-208ENST00000468600 NQO2P16083 231 aa-0.99□□□□□ -2.57
SSB-208ENST00000468600 HIST1H1CP16403 213 aaKnown RBP-0.99□□□□□ -2.57
SSB-208ENST00000468600 NFYAP23511 347 aaPredicted RBP-0.99□□□□□ -2.57
SSB-208ENST00000468600 GRPRP30550 384 aa-0.99□□□□□ -2.57
SSB-208ENST00000468600 H2BFSP57053 126 aa-0.99□□□□□ -2.57
SSB-208ENST00000468600 SPATA24Q86W54 205 aa-0.99□□□□□ -2.57
SSB-208ENST00000468600 LRRC6Q86X45 466 aa-0.99□□□□□ -2.57
SSB-208ENST00000468600 NDEL1Q9GZM8 345 aa-0.99□□□□□ -2.57
SSB-208ENST00000468600 RABL2BQ9UNT1 228 aa-0.99□□□□□ -2.57
SSB-208ENST00000468600 SBDSQ9Y3A5 250 aaKnown RBP eCLIP-0.99□□□□□ -2.57
SSB-208ENST00000468600 ASCC3Q8N3C0 2202 aaKnown RBP-0.99□□□□□ -2.57
SSB-208ENST00000468600 KIAA1549Q9HCM3 1950 aa-0.99□□□□□ -2.57
SSB-208ENST00000468600 HEATR5AQ86XA9 2040 aa-0.99□□□□□ -2.57
SSB-208ENST00000468600 APC2O95996 2303 aa-1□□□□□ -2.57
SSB-208ENST00000468600 HERC1Q15751 4861 aa-1□□□□□ -2.57
SSB-208ENST00000468600 DOPEY1Q5JWR5 2465 aa-1□□□□□ -2.57
SSB-208ENST00000468600 HSPG2P98160 4391 aa-1□□□□□ -2.57
SSB-208ENST00000468600 LIMS3P0CW19 117 aa-1□□□□□ -2.57
SSB-208ENST00000468600 LIMS4P0CW20 117 aa-1□□□□□ -2.57
SSB-208ENST00000468600 CFL1P23528 166 aaKnown RBP-1□□□□□ -2.57
SSB-208ENST00000468600 F8A1P23610 371 aa-1□□□□□ -2.57
SSB-208ENST00000468600 SLCO1A2P46721 670 aa-1□□□□□ -2.57
SSB-208ENST00000468600 UBE2KP61086 200 aa-1□□□□□ -2.57
SSB-208ENST00000468600 RAB31Q13636 194 aa-1□□□□□ -2.57
SSB-208ENST00000468600 Q5BKY6 102 aa-1□□□□□ -2.57
SSB-208ENST00000468600 ZNF676Q8N7Q3 588 aa-1□□□□□ -2.57
SSB-208ENST00000468600 OR52K2Q8NGK3 314 aa-1□□□□□ -2.57
SSB-208ENST00000468600 LRRC45Q96CN5 670 aa-1□□□□□ -2.57
SSB-208ENST00000468600 FAM210AQ96ND0 272 aa-1□□□□□ -2.57
SSB-208ENST00000468600 PCYT1BQ9Y5K3 369 aaPredicted RBP-1□□□□□ -2.57
SSB-208ENST00000468600 NUP153P49790 1475 aaKnown RBP-1□□□□□ -2.57
SSB-208ENST00000468600 SETXQ7Z333 2677 aaKnown RBP-1.01□□□□□ -2.57
SSB-208ENST00000468600 PCLOQ9Y6V0 5065 aa-1.01□□□□□ -2.57
SSB-208ENST00000468600 TMEM269A0A1B0GVZ9 245 aa-1.01□□□□□ -2.57
SSB-208ENST00000468600 K7EIL1 84 aa-1.01□□□□□ -2.57
SSB-208ENST00000468600 SLC22A1O15245 554 aa-1.01□□□□□ -2.57
SSB-208ENST00000468600 SYNGR1O43759 233 aa-1.01□□□□□ -2.57
SSB-208ENST00000468600 FADS1O60427 444 aa-1.01□□□□□ -2.57
SSB-208ENST00000468600 ASS1P00966 412 aaKnown RBP-1.01□□□□□ -2.57
SSB-208ENST00000468600 CLPSP04118 112 aa-1.01□□□□□ -2.57
SSB-208ENST00000468600 RAB4BP61018 213 aa-1.01□□□□□ -2.57
SSB-208ENST00000468600 ZNF826PQ6ZT77 177 aa-1.01□□□□□ -2.57
SSB-208ENST00000468600 RASSF6Q6ZTQ3 369 aa-1.01□□□□□ -2.57
SSB-208ENST00000468600 C10orf67Q8IYJ2 551 aa-1.01□□□□□ -2.57
SSB-208ENST00000468600 OR1M1Q8NGA1 313 aa-1.01□□□□□ -2.57
SSB-208ENST00000468600 RAB2BQ8WUD1 216 aa-1.01□□□□□ -2.57
SSB-208ENST00000468600 SMIM12Q96EX1 92 aa-1.01□□□□□ -2.57
SSB-208ENST00000468600 ABCA12Q86UK0 2595 aa-1.02□□□□□ -2.57
SSB-208ENST00000468600 C2orf70A6NJV1 201 aa-1.02□□□□□ -2.57
SSB-208ENST00000468600 OR1I1O60431 355 aa-1.02□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms