RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 DLX4Q92988 240 aaPredicted RBP11.29□□□□□ -0.6
COMMD3-206ENST00000468179 ELOVL1Q9BW60 279 aa11.29□□□□□ -0.6
COMMD3-206ENST00000468179 SCOCQ9UIL1 159 aa11.29□□□□□ -0.6
COMMD3-206ENST00000468179 IGHV4OR15-8A0A075B7B6 117 aa11.28□□□□□ -0.6
COMMD3-206ENST00000468179 A0A087WW49 117 aa11.28□□□□□ -0.6
COMMD3-206ENST00000468179 DPPA5A6NC42 116 aa11.28□□□□□ -0.6
COMMD3-206ENST00000468179 FAM223BA6NKX1 122 aa11.28□□□□□ -0.6
COMMD3-206ENST00000468179 FAM25AB3EWG3 89 aa11.28□□□□□ -0.6
COMMD3-206ENST00000468179 FAM25CB3EWG5 89 aa11.28□□□□□ -0.6
COMMD3-206ENST00000468179 FAM25GB3EWG6 89 aa11.28□□□□□ -0.6
COMMD3-206ENST00000468179 TNFSF12O43508 249 aa11.28□□□□□ -0.6
COMMD3-206ENST00000468179 HPRT1P00492 218 aa11.28□□□□□ -0.6
COMMD3-206ENST00000468179 PMP2P02689 132 aa11.28□□□□□ -0.6
COMMD3-206ENST00000468179 SMIM18P0DKX4 95 aa11.28□□□□□ -0.6
COMMD3-206ENST00000468179 TATDN3Q17R31 274 aa11.28□□□□□ -0.6
COMMD3-206ENST00000468179 GPR107Q5VW38 600 aa11.28□□□□□ -0.6
COMMD3-206ENST00000468179 FAM223AQ8IWN6 122 aa11.28□□□□□ -0.6
COMMD3-206ENST00000468179 CMTM1Q8IZ96 169 aa11.28□□□□□ -0.6
COMMD3-206ENST00000468179 PUSL1Q8N0Z8 303 aaKnown RBP11.28□□□□□ -0.6
COMMD3-206ENST00000468179 GPX8Q8TED1 209 aa11.28□□□□□ -0.6
COMMD3-206ENST00000468179 OR4C12Q96R67 309 aa11.28□□□□□ -0.6
COMMD3-206ENST00000468179 ZNF2Q9BSG1 426 aaPredicted RBP11.28□□□□□ -0.6
COMMD3-206ENST00000468179 CMYA5Q8N3K9 4069 aa11.27□□□□□ -0.61
COMMD3-206ENST00000468179 HPGDSO60760 199 aa11.27□□□□□ -0.61
COMMD3-206ENST00000468179 SAP30O75446 220 aa11.27□□□□□ -0.61
COMMD3-206ENST00000468179 TPPPO94811 219 aa11.27□□□□□ -0.61
COMMD3-206ENST00000468179 DHFRP00374 187 aa11.27□□□□□ -0.61
COMMD3-206ENST00000468179 RCVRNP35243 200 aa11.27□□□□□ -0.61
COMMD3-206ENST00000468179 RPL27AP46776 148 aaKnown RBP11.27□□□□□ -0.61
COMMD3-206ENST00000468179 RFX2P48378 723 aa11.27□□□□□ -0.61
COMMD3-206ENST00000468179 SLURP1P55000 103 aa11.27□□□□□ -0.61
COMMD3-206ENST00000468179 TAS2R31P59538 309 aa11.27□□□□□ -0.61
COMMD3-206ENST00000468179 TSPAN5P62079 268 aa11.27□□□□□ -0.61
COMMD3-206ENST00000468179 RPL8P62917 257 aaKnown RBP11.27□□□□□ -0.61
COMMD3-206ENST00000468179 CTF1Q16619 201 aa11.27□□□□□ -0.61
COMMD3-206ENST00000468179 AADACL3Q5VUY0 350 aa11.27□□□□□ -0.61
COMMD3-206ENST00000468179 ZNF818PQ6ZRF7 136 aa11.27□□□□□ -0.61
COMMD3-206ENST00000468179 SNX29P2Q8IUI4 249 aa11.27□□□□□ -0.61
COMMD3-206ENST00000468179 VKORC1L1Q8N0U8 176 aa11.27□□□□□ -0.61
COMMD3-206ENST00000468179 TTC9CQ8N5M4 171 aa11.27□□□□□ -0.61
COMMD3-206ENST00000468179 ADAD2Q8NCV1 583 aaKnown RBP11.27□□□□□ -0.61
COMMD3-206ENST00000468179 MOB3AQ96BX8 217 aa11.27□□□□□ -0.61
COMMD3-206ENST00000468179 BET1LQ9NYM9 111 aa11.27□□□□□ -0.61
COMMD3-206ENST00000468179 PEF1Q9UBV8 284 aaKnown RBP11.27□□□□□ -0.61
COMMD3-206ENST00000468179 ADAM30Q9UKF2 790 aa11.27□□□□□ -0.61
COMMD3-206ENST00000468179 ZNF256Q9Y2P7 627 aaPredicted RBP11.27□□□□□ -0.61
COMMD3-206ENST00000468179 NQO2P16083 231 aa11.26□□□□□ -0.61
COMMD3-206ENST00000468179 ELK1P19419 428 aa11.26□□□□□ -0.61
COMMD3-206ENST00000468179 HLA-DMAP28067 261 aa11.26□□□□□ -0.61
COMMD3-206ENST00000468179 GNRHRP30968 328 aa11.26□□□□□ -0.61
COMMD3-206ENST00000468179 BRWD1-AS2P59051 145 aa11.26□□□□□ -0.61
COMMD3-206ENST00000468179 ATP5G2Q06055 141 aa11.26□□□□□ -0.61
COMMD3-206ENST00000468179 ZNF343Q6P1L6 599 aa11.26□□□□□ -0.61
COMMD3-206ENST00000468179 ACSM6Q6P461 480 aa11.26□□□□□ -0.61
COMMD3-206ENST00000468179 OR6Q1Q8NGQ2 317 aa11.26□□□□□ -0.61
COMMD3-206ENST00000468179 PLEKHA2Q9HB19 425 aa11.26□□□□□ -0.61
COMMD3-206ENST00000468179 HRASLSQ9HDD0 168 aa11.26□□□□□ -0.61
COMMD3-206ENST00000468179 ZNF257Q9Y2Q1 563 aa11.26□□□□□ -0.61
COMMD3-206ENST00000468179 ANKRD34BA5PLL1 514 aa11.25□□□□□ -0.61
COMMD3-206ENST00000468179 LY86O95711 162 aa11.25□□□□□ -0.61
COMMD3-206ENST00000468179 FGF2P09038 288 aa11.25□□□□□ -0.61
COMMD3-206ENST00000468179 APELAP0DMC3 54 aa11.25□□□□□ -0.61
COMMD3-206ENST00000468179 HLA-GP17693 338 aa11.25□□□□□ -0.61
COMMD3-206ENST00000468179 HRH1P35367 487 aa11.25□□□□□ -0.61
COMMD3-206ENST00000468179 ALDH3B2P48448 385 aa11.25□□□□□ -0.61
COMMD3-206ENST00000468179 ERVK-16P61578 105 aa11.25□□□□□ -0.61
COMMD3-206ENST00000468179 CD69Q07108 199 aa11.25□□□□□ -0.61
COMMD3-206ENST00000468179 SSX9Q7RTT3 188 aa11.25□□□□□ -0.61
COMMD3-206ENST00000468179 LYSMD2Q8IV50 215 aa11.25□□□□□ -0.61
COMMD3-206ENST00000468179 NECAP1Q8NC96 275 aa11.25□□□□□ -0.61
COMMD3-206ENST00000468179 OR51H1Q8NH63 302 aa11.25□□□□□ -0.61
COMMD3-206ENST00000468179 FYTTD1Q96QD9 318 aaKnown RBP11.25□□□□□ -0.61
COMMD3-206ENST00000468179 GPHA2Q96T91 129 aa11.25□□□□□ -0.61
COMMD3-206ENST00000468179 NAA50Q9GZZ1 169 aaKnown RBP11.25□□□□□ -0.61
COMMD3-206ENST00000468179 SLC2A9Q9NRM0 540 aa11.25□□□□□ -0.61
COMMD3-206ENST00000468179 PGPEP1Q9NXJ5 209 aa11.25□□□□□ -0.61
COMMD3-206ENST00000468179 COMMD9Q9P000 198 aa11.25□□□□□ -0.61
COMMD3-206ENST00000468179 TRBV9A0A0B4J1U6 114 aa11.24□□□□□ -0.61
COMMD3-206ENST00000468179 NPIPB5A8MRT5 1133 aa11.24□□□□□ -0.61
COMMD3-206ENST00000468179 GPR31O00270 319 aa11.24□□□□□ -0.61
COMMD3-206ENST00000468179 PGLYRP1O75594 196 aaPredicted RBP11.24□□□□□ -0.61
COMMD3-206ENST00000468179 RHOGP84095 191 aa11.24□□□□□ -0.61
COMMD3-206ENST00000468179 POU2AF1Q16633 256 aa11.24□□□□□ -0.61
COMMD3-206ENST00000468179 OR4A47Q6IF82 309 aa11.24□□□□□ -0.61
COMMD3-206ENST00000468179 DMBX1Q8NFW5 382 aa11.24□□□□□ -0.61
COMMD3-206ENST00000468179 B9D2Q9BPU9 175 aa11.24□□□□□ -0.61
COMMD3-206ENST00000468179 BCL7BQ9BQE9 202 aa11.24□□□□□ -0.61
COMMD3-206ENST00000468179 IFNA6P05013 189 aa11.23□□□□□ -0.61
COMMD3-206ENST00000468179 ZNF735P0CB33 412 aa11.23□□□□□ -0.61
COMMD3-206ENST00000468179 HIST1H1BP16401 226 aaKnown RBP11.23□□□□□ -0.61
COMMD3-206ENST00000468179 F2RP25116 425 aa11.23□□□□□ -0.61
COMMD3-206ENST00000468179 KLF5Q13887 457 aaPredicted RBP11.23□□□□□ -0.61
COMMD3-206ENST00000468179 RPEL1Q2QD12 228 aa11.23□□□□□ -0.61
COMMD3-206ENST00000468179 C10orf55Q5SWW7 151 aa11.23□□□□□ -0.61
COMMD3-206ENST00000468179 THOC7Q6I9Y2 204 aaKnown RBP11.23□□□□□ -0.61
COMMD3-206ENST00000468179 RAB2BQ8WUD1 216 aa11.23□□□□□ -0.61
COMMD3-206ENST00000468179 DGCR14Q96DF8 476 aaKnown RBP11.23□□□□□ -0.61
COMMD3-206ENST00000468179 PRR25Q96S07 402 aa11.23□□□□□ -0.61
COMMD3-206ENST00000468179 SRSF8Q9BRL6 282 aaKnown RBP11.23□□□□□ -0.61
COMMD3-206ENST00000468179 COMMD5Q9GZQ3 224 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms