RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 IGKV1-13P0DP09 117 aa14.68□□□□□ -0.06
COL7A1-207ENST00000467985 MRPS10P82664 201 aaKnown RBP14.68□□□□□ -0.06
COL7A1-207ENST00000467985 CCDC190Q86UF4 302 aa14.68□□□□□ -0.06
COL7A1-207ENST00000467985 HOGA1Q86XE5 327 aa14.68□□□□□ -0.06
COL7A1-207ENST00000467985 MMD2Q8IY49 270 aa14.68□□□□□ -0.06
COL7A1-207ENST00000467985 OR4S2Q8NH73 311 aa14.68□□□□□ -0.06
COL7A1-207ENST00000467985 FCAMRQ8WWV6 532 aa14.68□□□□□ -0.06
COL7A1-207ENST00000467985 SRSF12Q8WXF0 261 aaKnown RBP14.68□□□□□ -0.06
COL7A1-207ENST00000467985 SPIN2AQ99865 258 aa14.68□□□□□ -0.06
COL7A1-207ENST00000467985 SPIN2BQ9BPZ2 258 aa14.68□□□□□ -0.06
COL7A1-207ENST00000467985 SCPEP1Q9HB40 452 aa14.68□□□□□ -0.06
COL7A1-207ENST00000467985 COA4Q9NYJ1 87 aa14.68□□□□□ -0.06
COL7A1-207ENST00000467985 MPPED1O15442 326 aa14.67□□□□□ -0.06
COL7A1-207ENST00000467985 IGLV2-14P01704 120 aa14.67□□□□□ -0.06
COL7A1-207ENST00000467985 OR9G9P0C7N8 305 aa14.67□□□□□ -0.06
COL7A1-207ENST00000467985 SAA1P0DJI8 122 aaPredicted RBP14.67□□□□□ -0.06
COL7A1-207ENST00000467985 MSMO1Q15800 293 aa14.67□□□□□ -0.06
COL7A1-207ENST00000467985 ZNF66Q6ZN08 573 aa14.67□□□□□ -0.06
COL7A1-207ENST00000467985 IDO2Q6ZQW0 420 aa14.67□□□□□ -0.06
COL7A1-207ENST00000467985 VSTM2AQ8TAG5 236 aa14.67□□□□□ -0.06
COL7A1-207ENST00000467985 ZNF430Q9H8G1 570 aaPredicted RBP14.67□□□□□ -0.06
COL7A1-207ENST00000467985 SMAD5-AS1Q9Y6J3 95 aa14.67□□□□□ -0.06
COL7A1-207ENST00000467985 SULT1C2O00338 296 aa14.66□□□□□ -0.06
COL7A1-207ENST00000467985 FCER2P06734 321 aa14.66□□□□□ -0.06
COL7A1-207ENST00000467985 PTBP1P26599 531 aaKnown RBP eCLIP14.66□□□□□ -0.06
COL7A1-207ENST00000467985 LINC00299Q6ZSB3 139 aa14.66□□□□□ -0.06
COL7A1-207ENST00000467985 ADAD2Q8NCV1 583 aaKnown RBP14.66□□□□□ -0.06
COL7A1-207ENST00000467985 TCTEX1D2Q8WW35 142 aa14.66□□□□□ -0.06
COL7A1-207ENST00000467985 S100ZQ8WXG8 99 aa14.66□□□□□ -0.06
COL7A1-207ENST00000467985 ABHD1Q96SE0 405 aa14.66□□□□□ -0.06
COL7A1-207ENST00000467985 ANKRD34BA5PLL1 514 aa14.65□□□□□ -0.06
COL7A1-207ENST00000467985 GABARAPH6UMI1 98 aa14.65□□□□□ -0.06
COL7A1-207ENST00000467985 SPNP16150 400 aa14.65□□□□□ -0.06
COL7A1-207ENST00000467985 FCGR2CP31995 323 aa14.65□□□□□ -0.06
COL7A1-207ENST00000467985 KIR2DS2P43631 304 aa14.65□□□□□ -0.06
COL7A1-207ENST00000467985 RPL30P62888 115 aaKnown RBP14.65□□□□□ -0.06
COL7A1-207ENST00000467985 EIF4EBP1Q13541 118 aaPredicted RBP14.65□□□□□ -0.06
COL7A1-207ENST00000467985 OR2B11Q5JQS5 317 aa14.65□□□□□ -0.06
COL7A1-207ENST00000467985 ZNF343Q6P1L6 599 aa14.65□□□□□ -0.06
COL7A1-207ENST00000467985 SLC25A42Q86VD7 318 aa14.65□□□□□ -0.06
COL7A1-207ENST00000467985 MFSD4AQ8N468 514 aa14.65□□□□□ -0.06
COL7A1-207ENST00000467985 GVQW1Q8N7I0 195 aa14.65□□□□□ -0.06
COL7A1-207ENST00000467985 WWC2-AS2Q96NR7 200 aa14.65□□□□□ -0.06
COL7A1-207ENST00000467985 AIFM2Q9BRQ8 373 aa14.65□□□□□ -0.06
COL7A1-207ENST00000467985 PEF1Q9UBV8 284 aaKnown RBP14.65□□□□□ -0.06
COL7A1-207ENST00000467985 V9GYH0 126 aa14.65□□□□□ -0.06
COL7A1-207ENST00000467985 FAM223BA6NKX1 122 aa14.64□□□□□ -0.07
COL7A1-207ENST00000467985 OR2A4O95047 310 aa14.64□□□□□ -0.07
COL7A1-207ENST00000467985 HRASP01112 189 aa14.64□□□□□ -0.07
COL7A1-207ENST00000467985 APELAP0DMC3 54 aa14.64□□□□□ -0.07
COL7A1-207ENST00000467985 RCVRNP35243 200 aa14.64□□□□□ -0.07
COL7A1-207ENST00000467985 ETV6P41212 452 aa14.64□□□□□ -0.07
COL7A1-207ENST00000467985 ZNF45Q02386 682 aa14.64□□□□□ -0.07
COL7A1-207ENST00000467985 KLF5Q13887 457 aaPredicted RBP14.64□□□□□ -0.07
COL7A1-207ENST00000467985 TATDN3Q17R31 274 aa14.64□□□□□ -0.07
COL7A1-207ENST00000467985 FAM223AQ8IWN6 122 aa14.64□□□□□ -0.07
COL7A1-207ENST00000467985 ZBTB34Q8NCN2 500 aa14.64□□□□□ -0.07
COL7A1-207ENST00000467985 OR52I2Q8NH67 350 aa14.64□□□□□ -0.07
COL7A1-207ENST00000467985 GPX8Q8TED1 209 aa14.64□□□□□ -0.07
COL7A1-207ENST00000467985 SMIM4Q8WVI0 70 aa14.64□□□□□ -0.07
COL7A1-207ENST00000467985 OR2A7Q96R45 310 aa14.64□□□□□ -0.07
COL7A1-207ENST00000467985 TAS2R8Q9NYW2 309 aa14.64□□□□□ -0.07
COL7A1-207ENST00000467985 CTDSPLO15194 276 aa14.63□□□□□ -0.07
COL7A1-207ENST00000467985 KBTBD11O94819 623 aa14.63□□□□□ -0.07
COL7A1-207ENST00000467985 PPYP01298 95 aa14.63□□□□□ -0.07
COL7A1-207ENST00000467985 GP9P14770 177 aa14.63□□□□□ -0.07
COL7A1-207ENST00000467985 MAS1LP35410 378 aa14.63□□□□□ -0.07
COL7A1-207ENST00000467985 INPP1P49441 399 aa14.63□□□□□ -0.07
COL7A1-207ENST00000467985 DYRK1AQ13627 763 aa14.63□□□□□ -0.07
COL7A1-207ENST00000467985 Q8N402 240 aa14.63□□□□□ -0.07
COL7A1-207ENST00000467985 TTC9CQ8N5M4 171 aa14.63□□□□□ -0.07
COL7A1-207ENST00000467985 OR5AP2Q8NGF4 316 aa14.63□□□□□ -0.07
COL7A1-207ENST00000467985 SECTM1Q8WVN6 248 aa14.63□□□□□ -0.07
COL7A1-207ENST00000467985 U3KQK5 164 aa14.63□□□□□ -0.07
COL7A1-207ENST00000467985 RHOGP84095 191 aa14.62□□□□□ -0.07
COL7A1-207ENST00000467985 FAM209BQ5JX69 171 aa14.62□□□□□ -0.07
COL7A1-207ENST00000467985 VKORC1L1Q8N0U8 176 aa14.62□□□□□ -0.07
COL7A1-207ENST00000467985 PUSL1Q8N0Z8 303 aaKnown RBP14.62□□□□□ -0.07
COL7A1-207ENST00000467985 TMEM167AQ8TBQ9 72 aa14.62□□□□□ -0.07
COL7A1-207ENST00000467985 SNAPC3Q92966 411 aa14.62□□□□□ -0.07
COL7A1-207ENST00000467985 BORCS5Q969J3 196 aa14.62□□□□□ -0.07
COL7A1-207ENST00000467985 SOSTQ9BQB4 213 aa14.62□□□□□ -0.07
COL7A1-207ENST00000467985 WDR12Q9GZL7 423 aaKnown RBP14.62□□□□□ -0.07
COL7A1-207ENST00000467985 TRBV9A0A0B4J1U6 114 aa14.61□□□□□ -0.07
COL7A1-207ENST00000467985 IGLV1-51P01701 117 aa14.61□□□□□ -0.07
COL7A1-207ENST00000467985 TAS2R46P59540 309 aa14.61□□□□□ -0.07
COL7A1-207ENST00000467985 SSBP1Q04837 148 aaKnown RBP14.61□□□□□ -0.07
COL7A1-207ENST00000467985 ATP5G2Q06055 141 aa14.61□□□□□ -0.07
COL7A1-207ENST00000467985 ZNF846Q147U1 533 aa14.61□□□□□ -0.07
COL7A1-207ENST00000467985 ZNF79Q15937 498 aa14.61□□□□□ -0.07
COL7A1-207ENST00000467985 TRIQKQ629K1 86 aa14.61□□□□□ -0.07
COL7A1-207ENST00000467985 GDPD1Q8N9F7 314 aa14.61□□□□□ -0.07
COL7A1-207ENST00000467985 NECAP1Q8NC96 275 aa14.61□□□□□ -0.07
COL7A1-207ENST00000467985 OR9G4Q8NGQ1 327 aa14.61□□□□□ -0.07
COL7A1-207ENST00000467985 OR5H2Q8NGV7 314 aa14.61□□□□□ -0.07
COL7A1-207ENST00000467985 GIMAP1Q8WWP7 306 aa14.61□□□□□ -0.07
COL7A1-207ENST00000467985 RSRP1Q9BUV0 290 aa14.61□□□□□ -0.07
COL7A1-207ENST00000467985 SLC5A7Q9GZV3 580 aa14.61□□□□□ -0.07
COL7A1-207ENST00000467985 AKIP1Q9NQ31 210 aa14.61□□□□□ -0.07
COL7A1-207ENST00000467985 CCL28Q9NRJ3 127 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms