RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 IGLV2-14P01704 120 aa13□□□□□ -0.33
TRIM56-203ENST00000467847 HACD4Q5VWC8 232 aa13□□□□□ -0.33
TRIM56-203ENST00000467847 C22orf42Q6IC83 251 aa13□□□□□ -0.33
TRIM56-203ENST00000467847 NR2C2APQ86WQ0 139 aa13□□□□□ -0.33
TRIM56-203ENST00000467847 OR4S2Q8NH73 311 aa13□□□□□ -0.33
TRIM56-203ENST00000467847 VSTM2AQ8TAG5 236 aa13□□□□□ -0.33
TRIM56-203ENST00000467847 TCTEX1D2Q8WW35 142 aa13□□□□□ -0.33
TRIM56-203ENST00000467847 WDR89Q96FK6 387 aaPredicted RBP13□□□□□ -0.33
TRIM56-203ENST00000467847 FYTTD1Q96QD9 318 aaKnown RBP13□□□□□ -0.33
TRIM56-203ENST00000467847 OR2A7Q96R45 310 aa13□□□□□ -0.33
TRIM56-203ENST00000467847 IGKV1D-13A0A0B4J2D9 117 aa12.99□□□□□ -0.33
TRIM56-203ENST00000467847 TRDV1A0A1B0GX56 115 aa12.99□□□□□ -0.33
TRIM56-203ENST00000467847 SMIM30A4D0T7 59 aa12.99□□□□□ -0.33
TRIM56-203ENST00000467847 IGHV3-23P01764 117 aa12.99□□□□□ -0.33
TRIM56-203ENST00000467847 IL6RP08887 468 aaPredicted RBP12.99□□□□□ -0.33
TRIM56-203ENST00000467847 IGKV1-13P0DP09 117 aa12.99□□□□□ -0.33
TRIM56-203ENST00000467847 ARL3P36405 182 aa12.99□□□□□ -0.33
TRIM56-203ENST00000467847 RPL27AP46776 148 aaKnown RBP12.99□□□□□ -0.33
TRIM56-203ENST00000467847 HSD17B10Q99714 261 aaKnown RBP12.99□□□□□ -0.33
TRIM56-203ENST00000467847 DCSTAMPQ9H295 470 aa12.99□□□□□ -0.33
TRIM56-203ENST00000467847 SLC2A9Q9NRM0 540 aa12.99□□□□□ -0.33
TRIM56-203ENST00000467847 SPATA2Q9UM82 520 aa12.99□□□□□ -0.33
TRIM56-203ENST00000467847 SELENOKQ9Y6D0 94 aa12.99□□□□□ -0.33
TRIM56-203ENST00000467847 CBLN1P23435 193 aa12.98□□□□□ -0.33
TRIM56-203ENST00000467847 CNIH2Q6PI25 160 aa12.98□□□□□ -0.33
TRIM56-203ENST00000467847 CLEC19AQ6UXS0 136 aa12.98□□□□□ -0.33
TRIM56-203ENST00000467847 SLC16A13Q7RTY0 426 aa12.98□□□□□ -0.33
TRIM56-203ENST00000467847 GPHB5Q86YW7 130 aa12.98□□□□□ -0.33
TRIM56-203ENST00000467847 PUSL1Q8N0Z8 303 aaKnown RBP12.98□□□□□ -0.33
TRIM56-203ENST00000467847 TMEM167AQ8TBQ9 72 aa12.98□□□□□ -0.33
TRIM56-203ENST00000467847 NUDCD2Q8WVJ2 157 aa12.98□□□□□ -0.33
TRIM56-203ENST00000467847 CACNG8Q8WXS5 425 aa12.98□□□□□ -0.33
TRIM56-203ENST00000467847 CNBD2Q96M20 576 aa12.98□□□□□ -0.33
TRIM56-203ENST00000467847 CCDC140Q96MF4 163 aa12.98□□□□□ -0.33
TRIM56-203ENST00000467847 TAS2R8Q9NYW2 309 aa12.98□□□□□ -0.33
TRIM56-203ENST00000467847 BLOC1S6Q9UL45 172 aa12.98□□□□□ -0.33
TRIM56-203ENST00000467847 S4R3C0 116 aa12.98□□□□□ -0.33
TRIM56-203ENST00000467847 ZNF320A2RRD8 509 aa12.97□□□□□ -0.33
TRIM56-203ENST00000467847 TMEM235A6NFC5 223 aa12.97□□□□□ -0.33
TRIM56-203ENST00000467847 E7EUB6 86 aa12.97□□□□□ -0.33
TRIM56-203ENST00000467847 NDUFB8O95169 186 aa12.97□□□□□ -0.33
TRIM56-203ENST00000467847 DHFRP00374 187 aa12.97□□□□□ -0.33
TRIM56-203ENST00000467847 ZNF735P0CB33 412 aa12.97□□□□□ -0.33
TRIM56-203ENST00000467847 AREGP15514 252 aa12.97□□□□□ -0.33
TRIM56-203ENST00000467847 GALP22466 123 aa12.97□□□□□ -0.33
TRIM56-203ENST00000467847 MAS1LP35410 378 aa12.97□□□□□ -0.33
TRIM56-203ENST00000467847 ZNF57Q68EA5 555 aaPredicted RBP12.97□□□□□ -0.33
TRIM56-203ENST00000467847 EEF1AKMT3Q96AZ1 226 aa12.97□□□□□ -0.33
TRIM56-203ENST00000467847 PLECQ15149 4684 aaKnown RBP12.97□□□□□ -0.33
TRIM56-203ENST00000467847 A0A1B0GW64 132 aa12.96□□□□□ -0.33
TRIM56-203ENST00000467847 PSMB6P28072 239 aa12.96□□□□□ -0.33
TRIM56-203ENST00000467847 GNG2P59768 71 aa12.96□□□□□ -0.33
TRIM56-203ENST00000467847 EIF4EBP1Q13541 118 aaPredicted RBP12.96□□□□□ -0.33
TRIM56-203ENST00000467847 FAM106AQ4KMX7 169 aa12.96□□□□□ -0.33
TRIM56-203ENST00000467847 SSX9Q7RTT3 188 aa12.96□□□□□ -0.33
TRIM56-203ENST00000467847 TMEM61Q8N0U2 210 aa12.96□□□□□ -0.33
TRIM56-203ENST00000467847 MFSD4AQ8N468 514 aa12.96□□□□□ -0.33
TRIM56-203ENST00000467847 FANCD2OSQ96PS1 177 aa12.96□□□□□ -0.33
TRIM56-203ENST00000467847 ANXA10Q9UJ72 324 aa12.96□□□□□ -0.33
TRIM56-203ENST00000467847 TMEM213A2RRL7 107 aa12.95□□□□□ -0.34
TRIM56-203ENST00000467847 NOTOA8MTQ0 251 aa12.95□□□□□ -0.34
TRIM56-203ENST00000467847 A8MWP6 167 aa12.95□□□□□ -0.34
TRIM56-203ENST00000467847 SCGNO76038 276 aa12.95□□□□□ -0.34
TRIM56-203ENST00000467847 HRASP01112 189 aa12.95□□□□□ -0.34
TRIM56-203ENST00000467847 REG1AP05451 166 aa12.95□□□□□ -0.34
TRIM56-203ENST00000467847 CRYGCP07315 174 aa12.95□□□□□ -0.34
TRIM56-203ENST00000467847 DEFA4P12838 97 aa12.95□□□□□ -0.34
TRIM56-203ENST00000467847 HIST1H1BP16401 226 aaKnown RBP12.95□□□□□ -0.34
TRIM56-203ENST00000467847 BRWD1-AS2P59051 145 aa12.95□□□□□ -0.34
TRIM56-203ENST00000467847 RPL8P62917 257 aaKnown RBP12.95□□□□□ -0.34
TRIM56-203ENST00000467847 IZUMO2Q6UXV1 221 aa12.95□□□□□ -0.34
TRIM56-203ENST00000467847 ZNF66Q6ZN08 573 aa12.95□□□□□ -0.34
TRIM56-203ENST00000467847 OR52B4Q8NGK2 314 aa12.95□□□□□ -0.34
TRIM56-203ENST00000467847 GPHA2Q96T91 129 aa12.95□□□□□ -0.34
TRIM56-203ENST00000467847 VCX3BQ9H321 246 aa12.95□□□□□ -0.34
TRIM56-203ENST00000467847 MLXQ9UH92 298 aa12.95□□□□□ -0.34
TRIM56-203ENST00000467847 ALMS1Q8TCU4 4167 aa12.95□□□□□ -0.34
TRIM56-203ENST00000467847 SSX5O60225 188 aa12.94□□□□□ -0.34
TRIM56-203ENST00000467847 SCAF4O95104 1147 aaKnown RBP12.94□□□□□ -0.34
TRIM56-203ENST00000467847 CTRB1P17538 263 aa12.94□□□□□ -0.34
TRIM56-203ENST00000467847 HLA-GP17693 338 aa12.94□□□□□ -0.34
TRIM56-203ENST00000467847 HSPA13P48723 471 aa12.94□□□□□ -0.34
TRIM56-203ENST00000467847 CTRB2Q6GPI1 263 aa12.94□□□□□ -0.34
TRIM56-203ENST00000467847 OR4A47Q6IF82 309 aa12.94□□□□□ -0.34
TRIM56-203ENST00000467847 UXS1Q8NBZ7 420 aa12.94□□□□□ -0.34
TRIM56-203ENST00000467847 GGTLC1Q9BX51 225 aa12.94□□□□□ -0.34
TRIM56-203ENST00000467847 DAPK2Q9UIK4 370 aa12.94□□□□□ -0.34
TRIM56-203ENST00000467847 TRBV7-1A0A0A6YYK4 115 aa12.93□□□□□ -0.34
TRIM56-203ENST00000467847 TNFSF12O43508 249 aa12.93□□□□□ -0.34
TRIM56-203ENST00000467847 MYOD1P15172 320 aa12.93□□□□□ -0.34
TRIM56-203ENST00000467847 ARPC4P59998 168 aa12.93□□□□□ -0.34
TRIM56-203ENST00000467847 ANKRD55Q3KP44 614 aa12.93□□□□□ -0.34
TRIM56-203ENST00000467847 BTNL8Q6UX41 500 aa12.93□□□□□ -0.34
TRIM56-203ENST00000467847 HRASLSQ9HDD0 168 aa12.93□□□□□ -0.34
TRIM56-203ENST00000467847 TXNL4BQ9NX01 149 aaKnown RBP12.93□□□□□ -0.34
TRIM56-203ENST00000467847 IGLV11-55A0A075B6I3 123 aa12.92□□□□□ -0.34
TRIM56-203ENST00000467847 MFSD2BA6NFX1 497 aa12.92□□□□□ -0.34
TRIM56-203ENST00000467847 CLEC3BP05452 202 aa12.92□□□□□ -0.34
TRIM56-203ENST00000467847 FGF9P31371 208 aaPredicted RBP12.92□□□□□ -0.34
TRIM56-203ENST00000467847 KLK9Q2XQG4 91 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms