RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 YIF1AO95070 293 aa5.6□□□□□ -1.51
SCAF4-204ENST00000467731 PPYP01298 95 aa5.6□□□□□ -1.51
SCAF4-204ENST00000467731 MC5RP33032 325 aa5.6□□□□□ -1.51
SCAF4-204ENST00000467731 ZNF134P52741 427 aa5.6□□□□□ -1.51
SCAF4-204ENST00000467731 PAX8Q06710 450 aa5.6□□□□□ -1.51
SCAF4-204ENST00000467731 AADACL3Q5VUY0 350 aa5.6□□□□□ -1.51
SCAF4-204ENST00000467731 DHRS11Q6UWP2 260 aa5.6□□□□□ -1.51
SCAF4-204ENST00000467731 VMO1Q7Z5L0 202 aa5.6□□□□□ -1.51
SCAF4-204ENST00000467731 BAP18Q8IXM2 172 aa5.6□□□□□ -1.51
SCAF4-204ENST00000467731 H1FOOQ8IZA3 346 aaPredicted RBP5.6□□□□□ -1.51
SCAF4-204ENST00000467731 YPEL2Q96QA6 119 aa5.6□□□□□ -1.51
SCAF4-204ENST00000467731 ATP6V0BQ99437 205 aa5.6□□□□□ -1.51
SCAF4-204ENST00000467731 SIRPDQ9H106 197 aa5.6□□□□□ -1.51
SCAF4-204ENST00000467731 TMEM133Q9H2Q1 129 aa5.6□□□□□ -1.51
SCAF4-204ENST00000467731 PSG11Q9UQ72 335 aa5.6□□□□□ -1.51
SCAF4-204ENST00000467731 MTORP42345 2549 aa5.6□□□□□ -1.51
SCAF4-204ENST00000467731 NAP1L6A6NFF2 107 aa5.6□□□□□ -1.51
SCAF4-204ENST00000467731 OR5H14A6NHG9 310 aa5.6□□□□□ -1.51
SCAF4-204ENST00000467731 TUSC2O75896 110 aa5.6□□□□□ -1.51
SCAF4-204ENST00000467731 AADACP22760 399 aa5.6□□□□□ -1.51
SCAF4-204ENST00000467731 PRTN3P24158 256 aa5.6□□□□□ -1.51
SCAF4-204ENST00000467731 FXYD4P59646 89 aa5.6□□□□□ -1.51
SCAF4-204ENST00000467731 KLRD1Q13241 179 aa5.6□□□□□ -1.51
SCAF4-204ENST00000467731 TMEM30BQ3MIR4 351 aa5.6□□□□□ -1.51
SCAF4-204ENST00000467731 NCR3LG1Q68D85 454 aa5.6□□□□□ -1.51
SCAF4-204ENST00000467731 TMUB2Q71RG4 321 aa5.6□□□□□ -1.51
SCAF4-204ENST00000467731 C1QL4Q86Z23 238 aa5.6□□□□□ -1.51
SCAF4-204ENST00000467731 OR2AK2Q8NG84 335 aa5.6□□□□□ -1.51
SCAF4-204ENST00000467731 MRGPRFQ96AM1 343 aa5.6□□□□□ -1.51
SCAF4-204ENST00000467731 DNAJC4Q9NNZ3 241 aa5.6□□□□□ -1.51
SCAF4-204ENST00000467731 ZNRD1Q9P1U0 126 aa5.6□□□□□ -1.51
SCAF4-204ENST00000467731 OR2W1Q9Y3N9 320 aa5.6□□□□□ -1.51
SCAF4-204ENST00000467731 ANK3Q12955 4377 aaKnown RBP5.6□□□□□ -1.51
SCAF4-204ENST00000467731 F8P00451 2351 aa5.59□□□□□ -1.51
SCAF4-204ENST00000467731 NAV3Q8IVL0 2385 aa5.59□□□□□ -1.51
SCAF4-204ENST00000467731 ELOA3CA0A087WX78 387 aaPredicted RBP5.59□□□□□ -1.51
SCAF4-204ENST00000467731 IGHV2-26A0A0B4J1V2 119 aa5.59□□□□□ -1.51
SCAF4-204ENST00000467731 IGKV1D-13A0A0B4J2D9 117 aa5.59□□□□□ -1.51
SCAF4-204ENST00000467731 C20orf202A1L168 122 aa5.59□□□□□ -1.51
SCAF4-204ENST00000467731 IGKV1-13P0DP09 117 aa5.59□□□□□ -1.51
SCAF4-204ENST00000467731 GATA3P23771 443 aa5.59□□□□□ -1.51
SCAF4-204ENST00000467731 SELENOTP62341 195 aa5.59□□□□□ -1.51
SCAF4-204ENST00000467731 LHFPL1Q86WI0 220 aa5.59□□□□□ -1.51
SCAF4-204ENST00000467731 ABHD12Q8N2K0 398 aa5.59□□□□□ -1.51
SCAF4-204ENST00000467731 OR13C8Q8NGS7 320 aa5.59□□□□□ -1.51
SCAF4-204ENST00000467731 TOMM40LQ969M1 308 aa5.59□□□□□ -1.51
SCAF4-204ENST00000467731 TBX15Q96SF7 602 aa5.59□□□□□ -1.51
SCAF4-204ENST00000467731 AGMATQ9BSE5 352 aa5.59□□□□□ -1.51
SCAF4-204ENST00000467731 C7orf69Q9H7B7 122 aa5.59□□□□□ -1.51
SCAF4-204ENST00000467731 TUBA4BQ9H853 241 aa5.59□□□□□ -1.51
SCAF4-204ENST00000467731 SLC2A8Q9NY64 477 aa5.59□□□□□ -1.51
SCAF4-204ENST00000467731 PHOX2AO14813 284 aa5.59□□□□□ -1.51
SCAF4-204ENST00000467731 CRYGCP07315 174 aa5.59□□□□□ -1.51
SCAF4-204ENST00000467731 OR8U9P0C7N5 309 aa5.59□□□□□ -1.51
SCAF4-204ENST00000467731 HOXB4P17483 251 aaPredicted RBP5.59□□□□□ -1.51
SCAF4-204ENST00000467731 HLA-GP17693 338 aa5.59□□□□□ -1.51
SCAF4-204ENST00000467731 COX7A1P24310 79 aa5.59□□□□□ -1.51
SCAF4-204ENST00000467731 RAG2P55895 527 aa5.59□□□□□ -1.51
SCAF4-204ENST00000467731 CT45A1Q5HYN5 189 aa5.59□□□□□ -1.51
SCAF4-204ENST00000467731 KCTD9Q7L273 389 aa5.59□□□□□ -1.51
SCAF4-204ENST00000467731 ZNF664Q8N3J9 261 aa5.59□□□□□ -1.51
SCAF4-204ENST00000467731 ZNF439Q8NDP4 499 aa5.59□□□□□ -1.51
SCAF4-204ENST00000467731 OR8U1Q8NH10 309 aa5.59□□□□□ -1.51
SCAF4-204ENST00000467731 CT45A3Q8NHU0 189 aa5.59□□□□□ -1.51
SCAF4-204ENST00000467731 MOB3AQ96BX8 217 aa5.59□□□□□ -1.51
SCAF4-204ENST00000467731 ABHD14AQ9BUJ0 271 aa5.59□□□□□ -1.51
SCAF4-204ENST00000467731 FXYD6Q9H0Q3 95 aa5.59□□□□□ -1.51
SCAF4-204ENST00000467731 NAGKQ9UJ70 344 aa5.59□□□□□ -1.51
SCAF4-204ENST00000467731 ZFP30Q9Y2G7 519 aa5.59□□□□□ -1.51
SCAF4-204ENST00000467731 RBM7Q9Y580 266 aaKnown RBP5.59□□□□□ -1.51
SCAF4-204ENST00000467731 HMSDA8MTL9 139 aa5.58□□□□□ -1.52
SCAF4-204ENST00000467731 RNASEK-C17orf49H0YIS7 233 aa5.58□□□□□ -1.52
SCAF4-204ENST00000467731 SSNA1O43805 119 aa5.58□□□□□ -1.52
SCAF4-204ENST00000467731 AVPP01185 164 aa5.58□□□□□ -1.52
SCAF4-204ENST00000467731 RAB5AP20339 215 aa5.58□□□□□ -1.52
SCAF4-204ENST00000467731 EPHA1P21709 976 aa5.58□□□□□ -1.52
SCAF4-204ENST00000467731 HERV-K104P61576 105 aa5.58□□□□□ -1.52
SCAF4-204ENST00000467731 HCP5Q6MZN7 132 aa5.58□□□□□ -1.52
SCAF4-204ENST00000467731 SLC25A48Q6ZT89 311 aaKnown RBP5.58□□□□□ -1.52
SCAF4-204ENST00000467731 PNKDQ8N490 385 aa5.58□□□□□ -1.52
SCAF4-204ENST00000467731 OR13D1Q8NGV5 346 aa5.58□□□□□ -1.52
SCAF4-204ENST00000467731 OR9G1Q8NH87 305 aa5.58□□□□□ -1.52
SCAF4-204ENST00000467731 SECTM1Q8WVN6 248 aa5.58□□□□□ -1.52
SCAF4-204ENST00000467731 LHX4Q969G2 390 aa5.58□□□□□ -1.52
SCAF4-204ENST00000467731 ABHD14BQ96IU4 210 aa5.58□□□□□ -1.52
SCAF4-204ENST00000467731 SPXQ9BT56 116 aa5.58□□□□□ -1.52
SCAF4-204ENST00000467731 CLEC7AQ9BXN2 247 aa5.58□□□□□ -1.52
SCAF4-204ENST00000467731 OR2D2Q9H210 308 aa5.58□□□□□ -1.52
SCAF4-204ENST00000467731 RNF150Q9ULK6 438 aa5.58□□□□□ -1.52
SCAF4-204ENST00000467731 HIVEP2P31629 2446 aa5.58□□□□□ -1.52
SCAF4-204ENST00000467731 TRAV40A0A0B4J280 105 aa5.58□□□□□ -1.52
SCAF4-204ENST00000467731 J3QR06 171 aa5.58□□□□□ -1.52
SCAF4-204ENST00000467731 CD34P28906 385 aa5.58□□□□□ -1.52
SCAF4-204ENST00000467731 CAMLGP49069 296 aa5.58□□□□□ -1.52
SCAF4-204ENST00000467731 LUMP51884 338 aaPredicted RBP5.58□□□□□ -1.52
SCAF4-204ENST00000467731 PTTG1IPP53801 180 aa5.58□□□□□ -1.52
SCAF4-204ENST00000467731 KRTAP1-1Q07627 177 aa5.58□□□□□ -1.52
SCAF4-204ENST00000467731 MARCH1Q8TCQ1 289 aa5.58□□□□□ -1.52
SCAF4-204ENST00000467731 SMIM12Q96EX1 92 aa5.58□□□□□ -1.52
SCAF4-204ENST00000467731 C18orf12Q96KH6 178 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms