RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 OR13C8Q8NGS7 320 aa2.53□□□□□ -2
VPS50-209ENST00000467326 FAM57AQ8TBR7 257 aa2.53□□□□□ -2
VPS50-209ENST00000467326 C2orf15Q8WU43 125 aaKnown RBP2.53□□□□□ -2
VPS50-209ENST00000467326 SLC7A6Q92536 515 aa2.53□□□□□ -2
VPS50-209ENST00000467326 KLK6Q92876 244 aa2.53□□□□□ -2
VPS50-209ENST00000467326 RMI2Q96E14 147 aa2.53□□□□□ -2
VPS50-209ENST00000467326 ADAT3Q96EY9 351 aaPredicted RBP2.53□□□□□ -2
VPS50-209ENST00000467326 CCL13Q99616 98 aa2.53□□□□□ -2
VPS50-209ENST00000467326 IMUPQ9GZP8 106 aa2.53□□□□□ -2
VPS50-209ENST00000467326 OR2D2Q9H210 308 aa2.53□□□□□ -2
VPS50-209ENST00000467326 PLEKHF2Q9H8W4 249 aa2.53□□□□□ -2
VPS50-209ENST00000467326 FBXL12Q9NXK8 326 aa2.53□□□□□ -2
VPS50-209ENST00000467326 TAAR3PQ9P1P4 343 aa2.53□□□□□ -2
VPS50-209ENST00000467326 RPS6KB2Q9UBS0 482 aa2.53□□□□□ -2
VPS50-209ENST00000467326 GNG8Q9UK08 70 aa2.53□□□□□ -2
VPS50-209ENST00000467326 FAM135AQ9P2D6 1515 aa2.52□□□□□ -2.01
VPS50-209ENST00000467326 CECR2Q9BXF3 1484 aa2.52□□□□□ -2.01
VPS50-209ENST00000467326 VWA8A3KMH1 1905 aa2.52□□□□□ -2.01
VPS50-209ENST00000467326 ERBINQ96RT1 1412 aa2.52□□□□□ -2.01
VPS50-209ENST00000467326 ROBO3Q96MS0 1386 aa2.52□□□□□ -2.01
VPS50-209ENST00000467326 A0A087WX48 190 aa2.52□□□□□ -2.01
VPS50-209ENST00000467326 TRAV4A0A0B4J268 109 aa2.52□□□□□ -2.01
VPS50-209ENST00000467326 IGHV1OR15-9A0A0B4J2B8 117 aa2.52□□□□□ -2.01
VPS50-209ENST00000467326 DUXBA0A1W2PPF3 345 aa2.52□□□□□ -2.01
VPS50-209ENST00000467326 A8MWL6 223 aa2.52□□□□□ -2.01
VPS50-209ENST00000467326 TRAF3IP2O43734 574 aaPredicted RBP2.52□□□□□ -2.01
VPS50-209ENST00000467326 OR7C2O60412 319 aa2.52□□□□□ -2.01
VPS50-209ENST00000467326 CDS2O95674 445 aa2.52□□□□□ -2.01
VPS50-209ENST00000467326 CXorf1O96002 111 aa2.52□□□□□ -2.01
VPS50-209ENST00000467326 LTAP01374 205 aa2.52□□□□□ -2.01
VPS50-209ENST00000467326 IGLV3-27P01718 113 aa2.52□□□□□ -2.01
VPS50-209ENST00000467326 OPN1SWP03999 348 aa2.52□□□□□ -2.01
VPS50-209ENST00000467326 HSPB1P04792 205 aaKnown RBP2.52□□□□□ -2.01
VPS50-209ENST00000467326 NPY1RP25929 384 aa2.52□□□□□ -2.01
VPS50-209ENST00000467326 S100A2P29034 98 aa2.52□□□□□ -2.01
VPS50-209ENST00000467326 CD200P41217 278 aa2.52□□□□□ -2.01
VPS50-209ENST00000467326 CXCL5P42830 114 aa2.52□□□□□ -2.01
VPS50-209ENST00000467326 ATP5G3P48201 142 aa2.52□□□□□ -2.01
VPS50-209ENST00000467326 AKR1D1P51857 326 aa2.52□□□□□ -2.01
VPS50-209ENST00000467326 POLR2HP52434 150 aaKnown RBP2.52□□□□□ -2.01
VPS50-209ENST00000467326 WNT4P56705 351 aa2.52□□□□□ -2.01
VPS50-209ENST00000467326 KLF3P57682 345 aaPredicted RBP2.52□□□□□ -2.01
VPS50-209ENST00000467326 KRTAP10-1P60331 282 aa2.52□□□□□ -2.01
VPS50-209ENST00000467326 PSG9Q00887 426 aa2.52□□□□□ -2.01
VPS50-209ENST00000467326 EMX2Q04743 252 aa2.52□□□□□ -2.01
VPS50-209ENST00000467326 LTC4SQ16873 150 aa2.52□□□□□ -2.01
VPS50-209ENST00000467326 LINC00303Q3SY05 128 aa2.52□□□□□ -2.01
VPS50-209ENST00000467326 MORN2Q502X0 79 aa2.52□□□□□ -2.01
VPS50-209ENST00000467326 OR8I2Q8N0Y5 310 aa2.52□□□□□ -2.01
VPS50-209ENST00000467326 KRTCAP2Q8N6L1 136 aa2.52□□□□□ -2.01
VPS50-209ENST00000467326 C14orf178Q8N769 122 aaPredicted RBP2.52□□□□□ -2.01
VPS50-209ENST00000467326 TSTD1Q8NFU3 115 aa2.52□□□□□ -2.01
VPS50-209ENST00000467326 OR4C6Q8NH72 309 aa2.52□□□□□ -2.01
VPS50-209ENST00000467326 SLC25A40Q8TBP6 338 aa2.52□□□□□ -2.01
VPS50-209ENST00000467326 MRPL30Q8TCC3 161 aaKnown RBP2.52□□□□□ -2.01
VPS50-209ENST00000467326 C18orf15Q96N68 181 aa2.52□□□□□ -2.01
VPS50-209ENST00000467326 DERL3Q96Q80 235 aa2.52□□□□□ -2.01
VPS50-209ENST00000467326 GGACTQ9BVM4 153 aa2.52□□□□□ -2.01
VPS50-209ENST00000467326 ZNF471Q9BX82 626 aaPredicted RBP2.52□□□□□ -2.01
VPS50-209ENST00000467326 OR2J1Q9GZK6 312 aa2.52□□□□□ -2.01
VPS50-209ENST00000467326 FGF23Q9GZV9 251 aaPredicted RBP2.52□□□□□ -2.01
VPS50-209ENST00000467326 COA4Q9NYJ1 87 aa2.52□□□□□ -2.01
VPS50-209ENST00000467326 U3KQ87 197 aa2.52□□□□□ -2.01
VPS50-209ENST00000467326 RIMS1Q86UR5 1692 aaKnown RBP2.52□□□□□ -2.01
VPS50-209ENST00000467326 COL16A1Q07092 1604 aaPredicted RBP2.52□□□□□ -2.01
VPS50-209ENST00000467326 FMN1Q68DA7 1419 aa2.51□□□□□ -2.01
VPS50-209ENST00000467326 CD109Q6YHK3 1445 aa2.51□□□□□ -2.01
VPS50-209ENST00000467326 CARMIL3Q8ND23 1372 aa2.51□□□□□ -2.01
VPS50-209ENST00000467326 TRBV20OR9-2A0A075B6H5 130 aa2.51□□□□□ -2.01
VPS50-209ENST00000467326 IGLV11-55A0A075B6I3 123 aa2.51□□□□□ -2.01
VPS50-209ENST00000467326 LINC00862A6NCI5 91 aa2.51□□□□□ -2.01
VPS50-209ENST00000467326 DPRXA6NFQ7 191 aa2.51□□□□□ -2.01
VPS50-209ENST00000467326 M0R2Z0 102 aa2.51□□□□□ -2.01
VPS50-209ENST00000467326 COX7A2LO14548 114 aa2.51□□□□□ -2.01
VPS50-209ENST00000467326 ZNF207O43670 478 aaKnown RBP2.51□□□□□ -2.01
VPS50-209ENST00000467326 IGLV2-23P01705 113 aa2.51□□□□□ -2.01
VPS50-209ENST00000467326 HTR1AP08908 422 aa2.51□□□□□ -2.01
VPS50-209ENST00000467326 SEC11BP0C7V7 166 aa2.51□□□□□ -2.01
VPS50-209ENST00000467326 SMIM10L2AP0DMW4 78 aa2.51□□□□□ -2.01
VPS50-209ENST00000467326 SMIM10L2BP0DMW5 78 aa2.51□□□□□ -2.01
VPS50-209ENST00000467326 EVI2AP22794 236 aa2.51□□□□□ -2.01
VPS50-209ENST00000467326 ATP6V0CP27449 155 aa2.51□□□□□ -2.01
VPS50-209ENST00000467326 OPRK1P41145 380 aa2.51□□□□□ -2.01
VPS50-209ENST00000467326 RRAS2P62070 204 aaPredicted RBP2.51□□□□□ -2.01
VPS50-209ENST00000467326 SELENOWP63302 87 aa2.51□□□□□ -2.01
VPS50-209ENST00000467326 LOXL1Q08397 574 aaPredicted RBP2.51□□□□□ -2.01
VPS50-209ENST00000467326 TAF9Q16594 264 aa2.51□□□□□ -2.01
VPS50-209ENST00000467326 WDR59Q6PJI9 974 aa2.51□□□□□ -2.01
VPS50-209ENST00000467326 TCTE3Q8IZS6 198 aa2.51□□□□□ -2.01
VPS50-209ENST00000467326 ZNF709Q8N972 641 aa2.51□□□□□ -2.01
VPS50-209ENST00000467326 FER1L6-AS1Q8NA97 138 aa2.51□□□□□ -2.01
VPS50-209ENST00000467326 TMEM229BQ8NBD8 167 aa2.51□□□□□ -2.01
VPS50-209ENST00000467326 OR10G2Q8NGC3 310 aa2.51□□□□□ -2.01
VPS50-209ENST00000467326 TERB2Q8NHR7 220 aa2.51□□□□□ -2.01
VPS50-209ENST00000467326 C15orf40Q8WUR7 153 aa2.51□□□□□ -2.01
VPS50-209ENST00000467326 C2orf50Q96LR7 162 aa2.51□□□□□ -2.01
VPS50-209ENST00000467326 IGF2BP2-AS1Q96M15 143 aa2.51□□□□□ -2.01
VPS50-209ENST00000467326 SPIN2AQ99865 258 aa2.51□□□□□ -2.01
VPS50-209ENST00000467326 SPIN2BQ9BPZ2 258 aa2.51□□□□□ -2.01
VPS50-209ENST00000467326 WDR61Q9GZS3 305 aaKnown RBP2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms