RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 RNF222A6NCQ9 220 aa10.42□□□□□ -0.74
COL4A1-202ENST00000467182 C15orf61A6NNL5 157 aa10.42□□□□□ -0.74
COL4A1-202ENST00000467182 KCNAB3O43448 404 aa10.42□□□□□ -0.74
COL4A1-202ENST00000467182 LGALS7P47929 136 aa10.42□□□□□ -0.74
COL4A1-202ENST00000467182 OR2B8PP59922 312 aa10.42□□□□□ -0.74
COL4A1-202ENST00000467182 UBE2KP61086 200 aa10.42□□□□□ -0.74
COL4A1-202ENST00000467182 PDLIM3Q53GG5 364 aaPredicted RBP10.42□□□□□ -0.74
COL4A1-202ENST00000467182 CCDC144NLQ6NUI1 221 aa10.42□□□□□ -0.74
COL4A1-202ENST00000467182 BRD3OSQ6XYD6 125 aa10.42□□□□□ -0.74
COL4A1-202ENST00000467182 ZNF429Q86V71 674 aa10.42□□□□□ -0.74
COL4A1-202ENST00000467182 TMEM167AQ8TBQ9 72 aa10.42□□□□□ -0.74
COL4A1-202ENST00000467182 RNF5Q99942 180 aa10.42□□□□□ -0.74
COL4A1-202ENST00000467182 PLSCR3Q9NRY6 295 aa10.42□□□□□ -0.74
COL4A1-202ENST00000467182 ZFP57Q9NU63 452 aa10.42□□□□□ -0.74
COL4A1-202ENST00000467182 TMEM14BQ9NUH8 114 aa10.42□□□□□ -0.74
COL4A1-202ENST00000467182 FOXA2Q9Y261 457 aaPredicted RBP10.42□□□□□ -0.74
COL4A1-202ENST00000467182 BOLA1Q9Y3E2 137 aa10.42□□□□□ -0.74
COL4A1-202ENST00000467182 A0A0U1RQK1 487 aa10.41□□□□□ -0.74
COL4A1-202ENST00000467182 MSGN1A6NI15 193 aa10.41□□□□□ -0.74
COL4A1-202ENST00000467182 ARPC5O15511 151 aa10.41□□□□□ -0.74
COL4A1-202ENST00000467182 KBTBD11O94819 623 aa10.41□□□□□ -0.74
COL4A1-202ENST00000467182 IGKV1D-33P01593 117 aa10.41□□□□□ -0.74
COL4A1-202ENST00000467182 IGKV1-33P01594 117 aa10.41□□□□□ -0.74
COL4A1-202ENST00000467182 SNRNP70P08621 437 aaKnown RBP10.41□□□□□ -0.74
COL4A1-202ENST00000467182 PET100P0DJ07 73 aa10.41□□□□□ -0.74
COL4A1-202ENST00000467182 MYOD1P15172 320 aa10.41□□□□□ -0.74
COL4A1-202ENST00000467182 CD24P25063 80 aa10.41□□□□□ -0.74
COL4A1-202ENST00000467182 TNFRSF9Q07011 255 aa10.41□□□□□ -0.74
COL4A1-202ENST00000467182 PSG5Q15238 335 aa10.41□□□□□ -0.74
COL4A1-202ENST00000467182 FAM120AOSQ5T036 256 aa10.41□□□□□ -0.74
COL4A1-202ENST00000467182 GPR157Q5UAW9 335 aa10.41□□□□□ -0.74
COL4A1-202ENST00000467182 ZNF546Q86UE3 836 aa10.41□□□□□ -0.74
COL4A1-202ENST00000467182 OR52E5Q8NH55 327 aa10.41□□□□□ -0.74
COL4A1-202ENST00000467182 OR4A5Q8NH83 315 aa10.41□□□□□ -0.74
COL4A1-202ENST00000467182 DCUN1D4Q92564 292 aa10.41□□□□□ -0.74
COL4A1-202ENST00000467182 EAF1Q96JC9 268 aaPredicted RBP10.41□□□□□ -0.74
COL4A1-202ENST00000467182 AIFM2Q9BRQ8 373 aa10.41□□□□□ -0.74
COL4A1-202ENST00000467182 MEGF9Q9H1U4 602 aa10.41□□□□□ -0.74
COL4A1-202ENST00000467182 RBKSQ9H477 322 aa10.41□□□□□ -0.74
COL4A1-202ENST00000467182 TPSG1Q9NRR2 321 aa10.41□□□□□ -0.74
COL4A1-202ENST00000467182 ANK3Q12955 4377 aaKnown RBP10.41□□□□□ -0.74
COL4A1-202ENST00000467182 ITPR3Q14573 2671 aa10.41□□□□□ -0.74
COL4A1-202ENST00000467182 E5RGE8 158 aa10.4□□□□□ -0.74
COL4A1-202ENST00000467182 SMAD7O15105 426 aaKnown RBP10.4□□□□□ -0.74
COL4A1-202ENST00000467182 SYNGR2O43760 224 aa10.4□□□□□ -0.74
COL4A1-202ENST00000467182 CHST1O43916 411 aa10.4□□□□□ -0.74
COL4A1-202ENST00000467182 SSSCA1O60232 199 aa10.4□□□□□ -0.74
COL4A1-202ENST00000467182 NDUFA3O95167 84 aa10.4□□□□□ -0.74
COL4A1-202ENST00000467182 MOSP00540 346 aa10.4□□□□□ -0.74
COL4A1-202ENST00000467182 RLN2P04090 185 aa10.4□□□□□ -0.74
COL4A1-202ENST00000467182 HKR1P10072 659 aa10.4□□□□□ -0.74
COL4A1-202ENST00000467182 F2RL1P55085 397 aa10.4□□□□□ -0.74
COL4A1-202ENST00000467182 ACOT7LQ6ZUV0 252 aa10.4□□□□□ -0.74
COL4A1-202ENST00000467182 THNSL2Q86YJ6 484 aa10.4□□□□□ -0.74
COL4A1-202ENST00000467182 TEX45Q8NA69 505 aa10.4□□□□□ -0.74
COL4A1-202ENST00000467182 NPBQ8NG41 125 aa10.4□□□□□ -0.74
COL4A1-202ENST00000467182 OR4A16Q8NH70 328 aa10.4□□□□□ -0.74
COL4A1-202ENST00000467182 PIFOQ8TCI5 191 aa10.4□□□□□ -0.74
COL4A1-202ENST00000467182 HSPB11Q9Y547 144 aa10.4□□□□□ -0.74
COL4A1-202ENST00000467182 ZFHX3Q15911 3703 aa10.4□□□□□ -0.74
COL4A1-202ENST00000467182 CGB1A6NKQ9 187 aa10.39□□□□□ -0.75
COL4A1-202ENST00000467182 SLC25A17O43808 307 aa10.39□□□□□ -0.75
COL4A1-202ENST00000467182 FGF2P09038 288 aa10.39□□□□□ -0.75
COL4A1-202ENST00000467182 P2RY1P47900 373 aa10.39□□□□□ -0.75
COL4A1-202ENST00000467182 DYNLT3P51808 116 aa10.39□□□□□ -0.75
COL4A1-202ENST00000467182 ZNF345Q14585 488 aa10.39□□□□□ -0.75
COL4A1-202ENST00000467182 VMA21Q3ZAQ7 101 aa10.39□□□□□ -0.75
COL4A1-202ENST00000467182 KCNRGQ8N5I3 272 aa10.39□□□□□ -0.75
COL4A1-202ENST00000467182 OR2T10Q8NGZ9 312 aa10.39□□□□□ -0.75
COL4A1-202ENST00000467182 VSTM2AQ8TAG5 236 aa10.39□□□□□ -0.75
COL4A1-202ENST00000467182 ZDHHC16Q969W1 377 aa10.39□□□□□ -0.75
COL4A1-202ENST00000467182 AQP10Q96PS8 301 aa10.39□□□□□ -0.75
COL4A1-202ENST00000467182 TSNAXQ99598 290 aaKnown RBP10.39□□□□□ -0.75
COL4A1-202ENST00000467182 MFFQ9GZY8 342 aa10.39□□□□□ -0.75
COL4A1-202ENST00000467182 ZNF430Q9H8G1 570 aaPredicted RBP10.39□□□□□ -0.75
COL4A1-202ENST00000467182 MAP1AP78559 2803 aaPredicted RBP10.38□□□□□ -0.75
COL4A1-202ENST00000467182 TEX50A0A1B0GTY4 177 aa10.38□□□□□ -0.75
COL4A1-202ENST00000467182 FAM24AA6NFZ4 105 aa10.38□□□□□ -0.75
COL4A1-202ENST00000467182 E7EUB6 86 aa10.38□□□□□ -0.75
COL4A1-202ENST00000467182 SNAPC5O75971 98 aa10.38□□□□□ -0.75
COL4A1-202ENST00000467182 SPDEFO95238 335 aa10.38□□□□□ -0.75
COL4A1-202ENST00000467182 IAPPP10997 89 aa10.38□□□□□ -0.75
COL4A1-202ENST00000467182 VDAC2P45880 294 aaPredicted RBP10.38□□□□□ -0.75
COL4A1-202ENST00000467182 SPCS3P61009 180 aa10.38□□□□□ -0.75
COL4A1-202ENST00000467182 HSPE1P61604 102 aaKnown RBP10.38□□□□□ -0.75
COL4A1-202ENST00000467182 SSBP2P81877 361 aaPredicted RBP10.38□□□□□ -0.75
COL4A1-202ENST00000467182 PJVKQ0ZLH3 352 aa10.38□□□□□ -0.75
COL4A1-202ENST00000467182 SPINK9Q5DT21 86 aa10.38□□□□□ -0.75
COL4A1-202ENST00000467182 TMUB2Q71RG4 321 aa10.38□□□□□ -0.75
COL4A1-202ENST00000467182 BSCL2Q96G97 398 aaPredicted RBP10.38□□□□□ -0.75
COL4A1-202ENST00000467182 SMIM8Q96KF7 97 aa10.38□□□□□ -0.75
COL4A1-202ENST00000467182 RAB40CQ96S21 281 aa10.38□□□□□ -0.75
COL4A1-202ENST00000467182 FBXL15Q9H469 300 aa10.38□□□□□ -0.75
COL4A1-202ENST00000467182 LYRM2Q9NU23 88 aaPredicted RBP10.38□□□□□ -0.75
COL4A1-202ENST00000467182 ITGB1BP2Q9UKP3 347 aa10.38□□□□□ -0.75
COL4A1-202ENST00000467182 PRNDQ9UKY0 176 aa10.38□□□□□ -0.75
COL4A1-202ENST00000467182 TCF19Q9Y242 345 aa10.38□□□□□ -0.75
COL4A1-202ENST00000467182 ZNF257Q9Y2Q1 563 aa10.38□□□□□ -0.75
COL4A1-202ENST00000467182 SIGLEC9Q9Y336 463 aa10.38□□□□□ -0.75
COL4A1-202ENST00000467182 OR51B2Q9Y5P1 312 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms