RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 MICU2Q8IYU8 434 aa1.83□□□□□ -2.12
XRN1-206ENST00000467077 OSR2Q8N2R0 312 aa1.83□□□□□ -2.12
XRN1-206ENST00000467077 STPG2Q8N412 459 aa1.83□□□□□ -2.12
XRN1-206ENST00000467077 MS4A15Q8N5U1 240 aa1.83□□□□□ -2.12
XRN1-206ENST00000467077 SLC26A10Q8NG04 563 aa1.83□□□□□ -2.12
XRN1-206ENST00000467077 TMEM239Q8WW34 195 aa1.83□□□□□ -2.12
XRN1-206ENST00000467077 C12orf43Q96C57 262 aaKnown RBP1.83□□□□□ -2.12
XRN1-206ENST00000467077 GAFA1Q96PS6 74 aa1.83□□□□□ -2.12
XRN1-206ENST00000467077 P2RX4Q99571 388 aa1.83□□□□□ -2.12
XRN1-206ENST00000467077 PITX2Q99697 317 aa1.83□□□□□ -2.12
XRN1-206ENST00000467077 PRSS27Q9BQR3 290 aa1.83□□□□□ -2.12
XRN1-206ENST00000467077 TM2D3Q9BRN9 247 aa1.83□□□□□ -2.12
XRN1-206ENST00000467077 NSRP1Q9H0G5 558 aaKnown RBP1.83□□□□□ -2.12
XRN1-206ENST00000467077 HDHD2Q9H0R4 259 aa1.83□□□□□ -2.12
XRN1-206ENST00000467077 RRP15Q9Y3B9 282 aaKnown RBP1.83□□□□□ -2.12
XRN1-206ENST00000467077 MED31Q9Y3C7 131 aa1.83□□□□□ -2.12
XRN1-206ENST00000467077 KIAA2026Q5HYC2 2103 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 TRAV27A0A087WT01 109 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 TRAV39A0A0B4J263 110 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 A0A0B4J2A0 478 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 TRIM64CA6NLI5 447 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 EVPLLA8MZ36 301 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 F6UB75 175 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 H3BSH0 61 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 M0QX08 132 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 MRPS12O15235 138 aaKnown RBP1.82□□□□□ -2.12
XRN1-206ENST00000467077 POLR3GO15318 223 aaPredicted RBP1.82□□□□□ -2.12
XRN1-206ENST00000467077 AKR7A2O43488 359 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 IFNA6P05013 189 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 BPGMP07738 259 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 TSPAN19P0C672 248 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 PGA5P0DJD9 388 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 PIPP12273 146 aaPredicted RBP1.82□□□□□ -2.12
XRN1-206ENST00000467077 IFI30P13284 250 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 IDO1P14902 403 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 SPNP16150 400 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 CCL3L1P16619 93 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 BRS3P32247 399 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 HRH1P35367 487 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 RBM34P42696 430 aaKnown RBP1.82□□□□□ -2.12
XRN1-206ENST00000467077 UBE2AP49459 152 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 RPL14P50914 215 aaKnown RBP1.82□□□□□ -2.12
XRN1-206ENST00000467077 DYNLT3P51808 116 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 MNAT1P51948 309 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 POLR2JP52435 117 aaKnown RBP1.82□□□□□ -2.12
XRN1-206ENST00000467077 KRTAP12-3P60328 96 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 NUTF2P61970 127 aaKnown RBP1.82□□□□□ -2.12
XRN1-206ENST00000467077 ACTA2P62736 377 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 RPL31P62899 125 aaKnown RBP1.82□□□□□ -2.12
XRN1-206ENST00000467077 ACTG2P63267 376 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 ACTC1P68032 377 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 HIST1H3AP68431 136 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 SLC35B1P78383 322 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 FADDQ13158 208 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 DEFB116Q30KQ4 102 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 MESTQ5EB52 335 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 GLYATL3Q5SZD4 288 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 LDLRAD2Q5SZI1 272 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 HIST2H3PS2Q5TEC6 136 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 WDR82Q6UXN9 313 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 ZNF493Q6ZR52 646 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 Q6ZSR3 168 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 HIST2H3AQ71DI3 136 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 NKAIN4Q8IVV8 208 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 OR6V1Q8N148 313 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 RPP25LQ8N5L8 163 aaKnown RBP1.82□□□□□ -2.12
XRN1-206ENST00000467077 OR1M1Q8NGA1 313 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 GPR32P1Q8NGA4 272 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 OR4M1Q8NGD0 313 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 OR4D11Q8NGI4 311 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 OR9I1Q8NGQ6 314 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 OR13D1Q8NGV5 346 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 OR8U1Q8NH10 309 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 OR51A7Q8NH64 312 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 OR2AE1Q8NHA4 323 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 OR5K1Q8NHB7 308 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 ANGPTL6Q8NI99 470 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 NDNFQ8TB73 568 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 DEDD2Q8WXF8 326 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 GTF2H4Q92759 462 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 SPTSSAQ969W0 71 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 Q96M85 177 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 ATP5SQ99766 215 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 ZNF426Q9BUY5 554 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 C20orf27Q9GZN8 174 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 SYT4Q9H2B2 425 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 WDR55Q9H6Y2 383 aaPredicted RBP1.82□□□□□ -2.12
XRN1-206ENST00000467077 FGF20Q9NP95 211 aaPredicted RBP1.82□□□□□ -2.12
XRN1-206ENST00000467077 C19orf12Q9NSK7 152 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 USE1Q9NZ43 259 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 SHPKQ9UHJ6 478 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 ATPIF1Q9UII2 106 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 LINC00527Q9UJ94 153 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 TBL2Q9Y4P3 447 aaKnown RBP1.82□□□□□ -2.12
XRN1-206ENST00000467077 LHFPL6Q9Y693 200 aa1.82□□□□□ -2.12
XRN1-206ENST00000467077 TRPC5OSA6NMA1 111 aa1.81□□□□□ -2.12
XRN1-206ENST00000467077 C17orf98A8MV24 154 aa1.81□□□□□ -2.12
XRN1-206ENST00000467077 ODF3BA8MYP8 253 aa1.81□□□□□ -2.12
XRN1-206ENST00000467077 EFCAB9A8MZ26 197 aa1.81□□□□□ -2.12
XRN1-206ENST00000467077 M0QZK8 103 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms