RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 RRASP10301 218 aa8.69□□□□□ -1.02
UBR4-210ENST00000466969 OSMP13725 252 aa8.69□□□□□ -1.02
UBR4-210ENST00000466969 PTBP1P26599 531 aaKnown RBP eCLIP8.69□□□□□ -1.02
UBR4-210ENST00000466969 CCR9P51686 369 aa8.69□□□□□ -1.02
UBR4-210ENST00000466969 RPL11P62913 178 aaKnown RBP8.69□□□□□ -1.02
UBR4-210ENST00000466969 CDK10Q15131 360 aa8.69□□□□□ -1.02
UBR4-210ENST00000466969 KLK9Q2XQG4 91 aa8.69□□□□□ -1.02
UBR4-210ENST00000466969 SPSB3Q6PJ21 355 aa8.69□□□□□ -1.02
UBR4-210ENST00000466969 OR14A2Q96R54 314 aa8.69□□□□□ -1.02
UBR4-210ENST00000466969 FAM30AQ9NZY2 134 aa8.69□□□□□ -1.02
UBR4-210ENST00000466969 THYN1Q9P016 225 aa8.69□□□□□ -1.02
UBR4-210ENST00000466969 KLK9Q9UKQ9 250 aa8.69□□□□□ -1.02
UBR4-210ENST00000466969 IGHV3OR16-12A0A075B7B8 117 aa8.68□□□□□ -1.02
UBR4-210ENST00000466969 IGHV3OR16-13A0A075B7E8 117 aa8.68□□□□□ -1.02
UBR4-210ENST00000466969 IGHV3-74A0A0B4J1X5 117 aa8.68□□□□□ -1.02
UBR4-210ENST00000466969 TRAV2A0A0B4J234 112 aa8.68□□□□□ -1.02
UBR4-210ENST00000466969 RS1O15537 224 aa8.68□□□□□ -1.02
UBR4-210ENST00000466969 EIF4EP06730 217 aaKnown RBP8.68□□□□□ -1.02
UBR4-210ENST00000466969 HTR1AP08908 422 aa8.68□□□□□ -1.02
UBR4-210ENST00000466969 AREGP15514 252 aa8.68□□□□□ -1.02
UBR4-210ENST00000466969 ZBTB25P24278 435 aa8.68□□□□□ -1.02
UBR4-210ENST00000466969 FGF9P31371 208 aaPredicted RBP8.68□□□□□ -1.02
UBR4-210ENST00000466969 ALDH3B2P48448 385 aa8.68□□□□□ -1.02
UBR4-210ENST00000466969 PSMD7P51665 324 aa8.68□□□□□ -1.02
UBR4-210ENST00000466969 NANOS3P60323 173 aaKnown RBP8.68□□□□□ -1.02
UBR4-210ENST00000466969 SNRPGP62308 76 aaKnown RBP8.68□□□□□ -1.02
UBR4-210ENST00000466969 TPBGQ13641 420 aa8.68□□□□□ -1.02
UBR4-210ENST00000466969 GPR176Q14439 515 aa8.68□□□□□ -1.02
UBR4-210ENST00000466969 ZNF705AQ6ZN79 300 aaPredicted RBP8.68□□□□□ -1.02
UBR4-210ENST00000466969 DUSP18Q8NEJ0 188 aa8.68□□□□□ -1.02
UBR4-210ENST00000466969 GIPC3Q8TF64 312 aa8.68□□□□□ -1.02
UBR4-210ENST00000466969 UPK3BQ9BT76 320 aa8.68□□□□□ -1.02
UBR4-210ENST00000466969 FGFR1OP2Q9NVK5 253 aa8.68□□□□□ -1.02
UBR4-210ENST00000466969 RABAC1Q9UI14 185 aa8.68□□□□□ -1.02
UBR4-210ENST00000466969 ZNF705FA8MVS1 300 aaPredicted RBP8.67□□□□□ -1.02
UBR4-210ENST00000466969 F5H768 121 aa8.67□□□□□ -1.02
UBR4-210ENST00000466969 ZNF705DP0CH99 300 aaPredicted RBP8.67□□□□□ -1.02
UBR4-210ENST00000466969 ZNF705BP0CI00 300 aaPredicted RBP8.67□□□□□ -1.02
UBR4-210ENST00000466969 ZNF93P35789 620 aaPredicted RBP8.67□□□□□ -1.02
UBR4-210ENST00000466969 RPL27AP46776 148 aaKnown RBP8.67□□□□□ -1.02
UBR4-210ENST00000466969 OR2B8PP59922 312 aa8.67□□□□□ -1.02
UBR4-210ENST00000466969 ZNF114Q8NC26 417 aa8.67□□□□□ -1.02
UBR4-210ENST00000466969 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.67□□□□□ -1.02
UBR4-210ENST00000466969 THTPAQ9BU02 230 aa8.67□□□□□ -1.02
UBR4-210ENST00000466969 ZNF556Q9HAH1 456 aa8.67□□□□□ -1.02
UBR4-210ENST00000466969 YTHDF2Q9Y5A9 579 aaKnown RBP8.67□□□□□ -1.02
UBR4-210ENST00000466969 TRAV14DV4A0A0A6YYC5 116 aa8.66□□□□□ -1.02
UBR4-210ENST00000466969 PRKYO43930 277 aa8.66□□□□□ -1.02
UBR4-210ENST00000466969 CRYZL1O95825 349 aa8.66□□□□□ -1.02
UBR4-210ENST00000466969 IL6RP08887 468 aaPredicted RBP8.66□□□□□ -1.02
UBR4-210ENST00000466969 SAA1P0DJI8 122 aaPredicted RBP8.66□□□□□ -1.02
UBR4-210ENST00000466969 OR2T5Q6IEZ7 315 aa8.66□□□□□ -1.02
UBR4-210ENST00000466969 CGB2Q6NT52 195 aa8.66□□□□□ -1.02
UBR4-210ENST00000466969 OR2T29Q8NH02 315 aa8.66□□□□□ -1.02
UBR4-210ENST00000466969 OSR1Q8TAX0 266 aaPredicted RBP8.66□□□□□ -1.02
UBR4-210ENST00000466969 RNF141Q8WVD5 230 aa8.66□□□□□ -1.02
UBR4-210ENST00000466969 PTX4Q96A99 478 aa8.66□□□□□ -1.02
UBR4-210ENST00000466969 CMTM5Q96DZ9 223 aa8.66□□□□□ -1.02
UBR4-210ENST00000466969 ZNF414Q96IQ9 312 aa8.66□□□□□ -1.02
UBR4-210ENST00000466969 UHRF2Q96PU4 802 aa8.66□□□□□ -1.02
UBR4-210ENST00000466969 OR1A1Q9P1Q5 309 aa8.66□□□□□ -1.02
UBR4-210ENST00000466969 A0A0U1RQV1 116 aa8.65□□□□□ -1.02
UBR4-210ENST00000466969 NUPL2O15504 423 aaKnown RBP8.65□□□□□ -1.02
UBR4-210ENST00000466969 ST8SIA3O43173 380 aa8.65□□□□□ -1.02
UBR4-210ENST00000466969 YIF1AO95070 293 aa8.65□□□□□ -1.02
UBR4-210ENST00000466969 HSD17B1P14061 328 aa8.65□□□□□ -1.02
UBR4-210ENST00000466969 ATP6V1E1P36543 226 aa8.65□□□□□ -1.02
UBR4-210ENST00000466969 FDX2Q6P4F2 183 aa8.65□□□□□ -1.02
UBR4-210ENST00000466969 NFE4Q86UQ8 179 aa8.65□□□□□ -1.02
UBR4-210ENST00000466969 SETD6Q8TBK2 473 aa8.65□□□□□ -1.02
UBR4-210ENST00000466969 VN1R17PQ8TDU5 208 aa8.65□□□□□ -1.02
UBR4-210ENST00000466969 TM2D1Q9BX74 207 aa8.65□□□□□ -1.02
UBR4-210ENST00000466969 PRRG3Q9BZD7 231 aa8.65□□□□□ -1.02
UBR4-210ENST00000466969 OR4C45A6NMZ5 311 aa8.64□□□□□ -1.03
UBR4-210ENST00000466969 E7EUB6 86 aa8.64□□□□□ -1.03
UBR4-210ENST00000466969 C1QBP02746 253 aa8.64□□□□□ -1.03
UBR4-210ENST00000466969 RPSAP08865 295 aaKnown RBP8.64□□□□□ -1.03
UBR4-210ENST00000466969 ZNF688P0C7X2 276 aa8.64□□□□□ -1.03
UBR4-210ENST00000466969 ZNF735P0CB33 412 aa8.64□□□□□ -1.03
UBR4-210ENST00000466969 MT1HL1P0DM35 61 aa8.64□□□□□ -1.03
UBR4-210ENST00000466969 DDI2Q5TDH0 399 aa8.64□□□□□ -1.03
UBR4-210ENST00000466969 AADACL4Q5VUY2 407 aa8.64□□□□□ -1.03
UBR4-210ENST00000466969 GID4Q8IVV7 300 aa8.64□□□□□ -1.03
UBR4-210ENST00000466969 GGHQ92820 318 aa8.64□□□□□ -1.03
UBR4-210ENST00000466969 CYYR1Q96J86 154 aa8.64□□□□□ -1.03
UBR4-210ENST00000466969 IL4I1Q96RQ9 567 aa8.64□□□□□ -1.03
UBR4-210ENST00000466969 SELENOIQ9C0D9 397 aa8.64□□□□□ -1.03
UBR4-210ENST00000466969 CHMP1AQ9HD42 196 aaPredicted RBP8.64□□□□□ -1.03
UBR4-210ENST00000466969 TAS2R4Q9NYW5 299 aa8.64□□□□□ -1.03
UBR4-210ENST00000466969 GHRLQ9UBU3 117 aa8.64□□□□□ -1.03
UBR4-210ENST00000466969 PDCD6O75340 191 aa8.63□□□□□ -1.03
UBR4-210ENST00000466969 KRTAP10-4P60372 401 aaPredicted RBP8.63□□□□□ -1.03
UBR4-210ENST00000466969 CBR4Q8N4T8 237 aa8.63□□□□□ -1.03
UBR4-210ENST00000466969 SVOPQ8N4V2 548 aa8.63□□□□□ -1.03
UBR4-210ENST00000466969 UBAC2Q8NBM4 344 aa8.63□□□□□ -1.03
UBR4-210ENST00000466969 DGCR14Q96DF8 476 aaKnown RBP8.63□□□□□ -1.03
UBR4-210ENST00000466969 GRAMD2BQ96HH9 432 aa8.63□□□□□ -1.03
UBR4-210ENST00000466969 WARS2Q9UGM6 360 aaKnown RBP8.63□□□□□ -1.03
UBR4-210ENST00000466969 FSIP2Q5CZC0 6907 aa8.63□□□□□ -1.03
UBR4-210ENST00000466969 LOC102723971A0A1B0GUV8 181 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms