RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 NUBP2Q9Y5Y2 271 aa13.33□□□□□ -0.28
USP39-211ENST00000465282 TRAV41A0A0B4J266 112 aa13.32□□□□□ -0.28
USP39-211ENST00000465282 ATG12O94817 140 aa13.32□□□□□ -0.28
USP39-211ENST00000465282 S1PR2O95136 353 aa13.32□□□□□ -0.28
USP39-211ENST00000465282 IGHG4P01861 327 aa13.32□□□□□ -0.28
USP39-211ENST00000465282 OPN1MWP04001 364 aa13.32□□□□□ -0.28
USP39-211ENST00000465282 IL6RP08887 468 aaPredicted RBP13.32□□□□□ -0.28
USP39-211ENST00000465282 OPN1MW2P0DN77 364 aa13.32□□□□□ -0.28
USP39-211ENST00000465282 OPN1MW3P0DN78 364 aa13.32□□□□□ -0.28
USP39-211ENST00000465282 NDPQ00604 133 aa13.32□□□□□ -0.28
USP39-211ENST00000465282 CD83Q01151 205 aa13.32□□□□□ -0.28
USP39-211ENST00000465282 CFHR3Q02985 330 aa13.32□□□□□ -0.28
USP39-211ENST00000465282 SRSF4Q08170 494 aaKnown RBP13.32□□□□□ -0.28
USP39-211ENST00000465282 PJVKQ0ZLH3 352 aa13.32□□□□□ -0.28
USP39-211ENST00000465282 MRGPRG-AS1Q2M3A8 158 aa13.32□□□□□ -0.28
USP39-211ENST00000465282 OR4A47Q6IF82 309 aa13.32□□□□□ -0.28
USP39-211ENST00000465282 VKORC1L1Q8N0U8 176 aa13.32□□□□□ -0.28
USP39-211ENST00000465282 DMBX1Q8NFW5 382 aa13.32□□□□□ -0.28
USP39-211ENST00000465282 ZNF430Q9H8G1 570 aaPredicted RBP13.32□□□□□ -0.28
USP39-211ENST00000465282 LINC00527Q9UJ94 153 aa13.32□□□□□ -0.28
USP39-211ENST00000465282 KCNIP3Q9Y2W7 256 aa13.32□□□□□ -0.28
USP39-211ENST00000465282 TEX13DA0A0J9YY54 714 aaPredicted RBP13.31□□□□□ -0.28
USP39-211ENST00000465282 MARCH11A6NNE9 402 aa13.31□□□□□ -0.28
USP39-211ENST00000465282 ELANEP08246 267 aa13.31□□□□□ -0.28
USP39-211ENST00000465282 EGR2P11161 476 aaPredicted RBP13.31□□□□□ -0.28
USP39-211ENST00000465282 PPIFP30405 207 aaKnown RBP13.31□□□□□ -0.28
USP39-211ENST00000465282 FOXE3Q13461 319 aa13.31□□□□□ -0.28
USP39-211ENST00000465282 RBMS2Q15434 407 aaKnown RBP13.31□□□□□ -0.28
USP39-211ENST00000465282 ZNF329Q86UD4 541 aa13.31□□□□□ -0.28
USP39-211ENST00000465282 NDUFA11Q86Y39 141 aa13.31□□□□□ -0.28
USP39-211ENST00000465282 SGPP2Q8IWX5 399 aa13.31□□□□□ -0.28
USP39-211ENST00000465282 RNF152Q8N8N0 203 aa13.31□□□□□ -0.28
USP39-211ENST00000465282 MINDY2Q8NBR6 621 aa13.31□□□□□ -0.28
USP39-211ENST00000465282 ABHD5Q8WTS1 349 aa13.31□□□□□ -0.28
USP39-211ENST00000465282 ZFP57Q9NU63 452 aa13.31□□□□□ -0.28
USP39-211ENST00000465282 PIGBOS1A0A0B4J2F0 54 aa13.3□□□□□ -0.28
USP39-211ENST00000465282 CRYM-AS1A6NIL9 109 aa13.3□□□□□ -0.28
USP39-211ENST00000465282 ARPC1BO15143 372 aaKnown RBP13.3□□□□□ -0.28
USP39-211ENST00000465282 KRASP01116 189 aa13.3□□□□□ -0.28
USP39-211ENST00000465282 CD28P10747 220 aa13.3□□□□□ -0.28
USP39-211ENST00000465282 UCP1P25874 307 aa13.3□□□□□ -0.28
USP39-211ENST00000465282 GNB1P62873 340 aa13.3□□□□□ -0.28
USP39-211ENST00000465282 RPL8P62917 257 aaKnown RBP13.3□□□□□ -0.28
USP39-211ENST00000465282 SSBP2P81877 361 aaPredicted RBP13.3□□□□□ -0.28
USP39-211ENST00000465282 DHODHQ02127 395 aa13.3□□□□□ -0.28
USP39-211ENST00000465282 TNXAQ16473 311 aa13.3□□□□□ -0.28
USP39-211ENST00000465282 C19orf54Q5BKX5 351 aa13.3□□□□□ -0.28
USP39-211ENST00000465282 SSX9Q7RTT3 188 aa13.3□□□□□ -0.28
USP39-211ENST00000465282 OR5M8Q8NGP6 311 aa13.3□□□□□ -0.28
USP39-211ENST00000465282 TP53RKQ96S44 253 aa13.3□□□□□ -0.28
USP39-211ENST00000465282 TSC22D3Q99576 134 aa13.3□□□□□ -0.28
USP39-211ENST00000465282 SPIN2AQ99865 258 aa13.3□□□□□ -0.28
USP39-211ENST00000465282 SPIN2BQ9BPZ2 258 aa13.3□□□□□ -0.28
USP39-211ENST00000465282 NAA60Q9H7X0 242 aa13.3□□□□□ -0.28
USP39-211ENST00000465282 TMEM140Q9NV12 185 aa13.3□□□□□ -0.28
USP39-211ENST00000465282 FOXA2Q9Y261 457 aaPredicted RBP13.3□□□□□ -0.28
USP39-211ENST00000465282 VSIG4Q9Y279 399 aa13.3□□□□□ -0.28
USP39-211ENST00000465282 FBXO7Q9Y3I1 522 aa13.3□□□□□ -0.28
USP39-211ENST00000465282 TSSC4Q9Y5U2 329 aaPredicted RBP13.3□□□□□ -0.28
USP39-211ENST00000465282 WSB1Q9Y6I7 421 aa13.3□□□□□ -0.28
USP39-211ENST00000465282 TCRBV4S1A1TA0A5B7 111 aa13.29□□□□□ -0.28
USP39-211ENST00000465282 M0QZ24 198 aa13.29□□□□□ -0.28
USP39-211ENST00000465282 UPK2O00526 184 aa13.29□□□□□ -0.28
USP39-211ENST00000465282 IGLV1-40P01703 118 aa13.29□□□□□ -0.28
USP39-211ENST00000465282 SLC6A1P30531 599 aa13.29□□□□□ -0.28
USP39-211ENST00000465282 C2orf68Q2NKX9 166 aa13.29□□□□□ -0.28
USP39-211ENST00000465282 CXorf66Q5JRM2 361 aaPredicted RBP13.29□□□□□ -0.28
USP39-211ENST00000465282 LFNGQ8NES3 379 aa13.29□□□□□ -0.28
USP39-211ENST00000465282 GRPEL2Q8TAA5 225 aa13.29□□□□□ -0.28
USP39-211ENST00000465282 SRSF12Q8WXF0 261 aaKnown RBP13.29□□□□□ -0.28
USP39-211ENST00000465282 GALNT14Q96FL9 552 aa13.29□□□□□ -0.28
USP39-211ENST00000465282 SEC22AQ96IW7 307 aa13.29□□□□□ -0.28
USP39-211ENST00000465282 CITED2Q99967 270 aaPredicted RBP13.29□□□□□ -0.28
USP39-211ENST00000465282 TMEM222Q9H0R3 208 aa13.29□□□□□ -0.28
USP39-211ENST00000465282 FKBP11Q9NYL4 201 aa13.29□□□□□ -0.28
USP39-211ENST00000465282 G3V318 75 aa13.28□□□□□ -0.28
USP39-211ENST00000465282 SNAPC5O75971 98 aa13.28□□□□□ -0.28
USP39-211ENST00000465282 CDS2O95674 445 aa13.28□□□□□ -0.28
USP39-211ENST00000465282 HLA-GP17693 338 aa13.28□□□□□ -0.28
USP39-211ENST00000465282 PSMB8P28062 276 aa13.28□□□□□ -0.28
USP39-211ENST00000465282 G6PCP35575 357 aa13.28□□□□□ -0.28
USP39-211ENST00000465282 UBE2MP61081 183 aaKnown RBP13.28□□□□□ -0.28
USP39-211ENST00000465282 ECSCRQ19T08 205 aa13.28□□□□□ -0.28
USP39-211ENST00000465282 TMEM128Q5BJH2 165 aa13.28□□□□□ -0.28
USP39-211ENST00000465282 TCTEX1D4Q5JR98 221 aa13.28□□□□□ -0.28
USP39-211ENST00000465282 TMEM65Q6PI78 240 aa13.28□□□□□ -0.28
USP39-211ENST00000465282 UNQ5815/PRO19632Q6UWF5 114 aa13.28□□□□□ -0.28
USP39-211ENST00000465282 C11orf44Q8N8P7 122 aa13.28□□□□□ -0.28
USP39-211ENST00000465282 GLYATL2Q8WU03 294 aa13.28□□□□□ -0.28
USP39-211ENST00000465282 LINC00854A0A1B0GVQ3 168 aa13.27□□□□□ -0.29
USP39-211ENST00000465282 MSGN1A6NI15 193 aa13.27□□□□□ -0.29
USP39-211ENST00000465282 H3BUA1 57 aa13.27□□□□□ -0.29
USP39-211ENST00000465282 PLA2G10O15496 165 aa13.27□□□□□ -0.29
USP39-211ENST00000465282 LYRM1O43325 122 aa13.27□□□□□ -0.29
USP39-211ENST00000465282 NDUFB6O95139 128 aa13.27□□□□□ -0.29
USP39-211ENST00000465282 BRI3O95415 125 aa13.27□□□□□ -0.29
USP39-211ENST00000465282 OR5AC1P0C628 307 aa13.27□□□□□ -0.29
USP39-211ENST00000465282 ANXA3P12429 323 aa13.27□□□□□ -0.29
USP39-211ENST00000465282 RPL27AP46776 148 aaKnown RBP13.27□□□□□ -0.29
USP39-211ENST00000465282 TRIM16LQ309B1 348 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms