RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 DERL3Q96Q80 235 aa2.79□□□□□ -1.96
PTCD3-205ENST00000464541 HSPB9Q9BQS6 159 aa2.79□□□□□ -1.96
PTCD3-205ENST00000464541 EFCAB11Q9BUY7 163 aa2.79□□□□□ -1.96
PTCD3-205ENST00000464541 MS4A8Q9BY19 250 aa2.79□□□□□ -1.96
PTCD3-205ENST00000464541 DAZ1Q9NQZ3 744 aaKnown RBP2.79□□□□□ -1.96
PTCD3-205ENST00000464541 ATRNO75882 1429 aa2.78□□□□□ -1.96
PTCD3-205ENST00000464541 SHROOM3Q8TF72 1996 aa2.78□□□□□ -1.96
PTCD3-205ENST00000464541 DHX57Q6P158 1386 aaKnown RBP2.78□□□□□ -1.96
PTCD3-205ENST00000464541 TMED7-TICAM2A0A0A6YYA0 188 aa2.78□□□□□ -1.96
PTCD3-205ENST00000464541 IGHV1-3A0A0C4DH29 117 aa2.78□□□□□ -1.96
PTCD3-205ENST00000464541 A0A1W2PRE2 83 aa2.78□□□□□ -1.96
PTCD3-205ENST00000464541 PIAS1O75925 651 aa2.78□□□□□ -1.96
PTCD3-205ENST00000464541 GADD45GO95257 159 aa2.78□□□□□ -1.96
PTCD3-205ENST00000464541 GPR75O95800 540 aa2.78□□□□□ -1.96
PTCD3-205ENST00000464541 LTAP01374 205 aa2.78□□□□□ -1.96
PTCD3-205ENST00000464541 IGLV3-27P01718 113 aa2.78□□□□□ -1.96
PTCD3-205ENST00000464541 C1QBP02746 253 aa2.78□□□□□ -1.96
PTCD3-205ENST00000464541 LGALS1P09382 135 aaKnown RBP2.78□□□□□ -1.96
PTCD3-205ENST00000464541 RBP1P09455 135 aa2.78□□□□□ -1.96
PTCD3-205ENST00000464541 CCL1P22362 96 aa2.78□□□□□ -1.96
PTCD3-205ENST00000464541 PSPHP78330 225 aa2.78□□□□□ -1.96
PTCD3-205ENST00000464541 MMDQ15546 238 aa2.78□□□□□ -1.96
PTCD3-205ENST00000464541 HES3Q5TGS1 186 aa2.78□□□□□ -1.96
PTCD3-205ENST00000464541 MORN3Q6PF18 240 aaPredicted RBP2.78□□□□□ -1.96
PTCD3-205ENST00000464541 SLC22A24Q8N4F4 322 aa2.78□□□□□ -1.96
PTCD3-205ENST00000464541 OR9Q1Q8NGQ5 310 aa2.78□□□□□ -1.96
PTCD3-205ENST00000464541 DNAJC30Q96LL9 226 aa2.78□□□□□ -1.96
PTCD3-205ENST00000464541 PFDN5Q99471 154 aa2.78□□□□□ -1.96
PTCD3-205ENST00000464541 CHST6Q9GZX3 395 aa2.78□□□□□ -1.96
PTCD3-205ENST00000464541 PBOV1Q9GZY1 135 aa2.78□□□□□ -1.96
PTCD3-205ENST00000464541 GPR84Q9NQS5 396 aa2.78□□□□□ -1.96
PTCD3-205ENST00000464541 LAMTOR3Q9UHA4 124 aa2.78□□□□□ -1.96
PTCD3-205ENST00000464541 IGKV2-24A0A0C4DH68 120 aa2.77□□□□□ -1.97
PTCD3-205ENST00000464541 LINC00862A6NCI5 91 aa2.77□□□□□ -1.97
PTCD3-205ENST00000464541 C4orf51C9J302 202 aa2.77□□□□□ -1.97
PTCD3-205ENST00000464541 M0R381 172 aa2.77□□□□□ -1.97
PTCD3-205ENST00000464541 SMIM24O75264 130 aa2.77□□□□□ -1.97
PTCD3-205ENST00000464541 FAM107AO95990 144 aa2.77□□□□□ -1.97
PTCD3-205ENST00000464541 IFNA7P01567 189 aa2.77□□□□□ -1.97
PTCD3-205ENST00000464541 OPN1SWP03999 348 aa2.77□□□□□ -1.97
PTCD3-205ENST00000464541 GYPCP04921 128 aa2.77□□□□□ -1.97
PTCD3-205ENST00000464541 CPMP14384 443 aa2.77□□□□□ -1.97
PTCD3-205ENST00000464541 COL8A2P25067 703 aa2.77□□□□□ -1.97
PTCD3-205ENST00000464541 CNTFRP26992 372 aa2.77□□□□□ -1.97
PTCD3-205ENST00000464541 ZNF140P52738 457 aaPredicted RBP2.77□□□□□ -1.97
PTCD3-205ENST00000464541 AKR1C2P52895 323 aa2.77□□□□□ -1.97
PTCD3-205ENST00000464541 CROCCP2Q86T23 111 aa2.77□□□□□ -1.97
PTCD3-205ENST00000464541 ZNF101Q8IZC7 436 aa2.77□□□□□ -1.97
PTCD3-205ENST00000464541 YIPF7Q8N8F6 280 aa2.77□□□□□ -1.97
PTCD3-205ENST00000464541 FER1L6-AS1Q8NA97 138 aa2.77□□□□□ -1.97
PTCD3-205ENST00000464541 GPR119Q8TDV5 335 aa2.77□□□□□ -1.97
PTCD3-205ENST00000464541 GNPNAT1Q96EK6 184 aaPredicted RBP2.77□□□□□ -1.97
PTCD3-205ENST00000464541 PYURFQ96I23 114 aa2.77□□□□□ -1.97
PTCD3-205ENST00000464541 TSPAN32Q96QS1 320 aa2.77□□□□□ -1.97
PTCD3-205ENST00000464541 SERPINI1Q99574 410 aa2.77□□□□□ -1.97
PTCD3-205ENST00000464541 CCL13Q99616 98 aa2.77□□□□□ -1.97
PTCD3-205ENST00000464541 ALX4Q9H161 411 aaPredicted RBP2.77□□□□□ -1.97
PTCD3-205ENST00000464541 CXorf21Q9HAI6 301 aa2.77□□□□□ -1.97
PTCD3-205ENST00000464541 LRTM1Q9HBL6 345 aa2.77□□□□□ -1.97
PTCD3-205ENST00000464541 SND1-IT1Q9HBX3 110 aa2.77□□□□□ -1.97
PTCD3-205ENST00000464541 CA10Q9NS85 328 aa2.77□□□□□ -1.97
PTCD3-205ENST00000464541 TAAR3PQ9P1P4 343 aa2.77□□□□□ -1.97
PTCD3-205ENST00000464541 DNMT1P26358 1616 aaKnown RBP2.77□□□□□ -1.97
PTCD3-205ENST00000464541 ERCC6Q03468 1493 aa2.77□□□□□ -1.97
PTCD3-205ENST00000464541 SHANK1Q9Y566 2161 aa2.76□□□□□ -1.97
PTCD3-205ENST00000464541 RIIAD1A6NNX1 92 aa2.76□□□□□ -1.97
PTCD3-205ENST00000464541 K7ERS5 55 aa2.76□□□□□ -1.97
PTCD3-205ENST00000464541 CST8O60676 142 aa2.76□□□□□ -1.97
PTCD3-205ENST00000464541 PDYNP01213 254 aa2.76□□□□□ -1.97
PTCD3-205ENST00000464541 ATP6V0CP27449 155 aa2.76□□□□□ -1.97
PTCD3-205ENST00000464541 G6PCP35575 357 aa2.76□□□□□ -1.97
PTCD3-205ENST00000464541 GLRXP35754 106 aa2.76□□□□□ -1.97
PTCD3-205ENST00000464541 PPP1CCP36873 323 aaKnown RBP2.76□□□□□ -1.97
PTCD3-205ENST00000464541 EMP1P54849 157 aa2.76□□□□□ -1.97
PTCD3-205ENST00000464541 RHEBQ15382 184 aa2.76□□□□□ -1.97
PTCD3-205ENST00000464541 TAF9Q16594 264 aa2.76□□□□□ -1.97
PTCD3-205ENST00000464541 C12orf74Q32Q52 190 aa2.76□□□□□ -1.97
PTCD3-205ENST00000464541 ZFAND6Q6FIF0 208 aa2.76□□□□□ -1.97
PTCD3-205ENST00000464541 LAIR2Q6ISS4 152 aa2.76□□□□□ -1.97
PTCD3-205ENST00000464541 MARCH3Q86UD3 253 aa2.76□□□□□ -1.97
PTCD3-205ENST00000464541 KRTAP13-1Q8IUC0 172 aa2.76□□□□□ -1.97
PTCD3-205ENST00000464541 CLVS1Q8IUQ0 354 aaPredicted RBP2.76□□□□□ -1.97
PTCD3-205ENST00000464541 C1orf64Q8NEQ6 169 aa2.76□□□□□ -1.97
PTCD3-205ENST00000464541 OR5J2Q8NH18 312 aa2.76□□□□□ -1.97
PTCD3-205ENST00000464541 LYSMD1Q96S90 227 aa2.76□□□□□ -1.97
PTCD3-205ENST00000464541 C1orf50Q9BV19 199 aa2.76□□□□□ -1.97
PTCD3-205ENST00000464541 RASL12Q9NYN1 266 aa2.76□□□□□ -1.97
PTCD3-205ENST00000464541 TVP23BQ9NYZ1 205 aa2.76□□□□□ -1.97
PTCD3-205ENST00000464541 MED11Q9P086 117 aa2.76□□□□□ -1.97
PTCD3-205ENST00000464541 ZNF492Q9P255 531 aa2.76□□□□□ -1.97
PTCD3-205ENST00000464541 SETD1AO15047 1707 aaKnown RBP2.76□□□□□ -1.97
PTCD3-205ENST00000464541 SIGLEC1Q9BZZ2 1709 aa2.76□□□□□ -1.97
PTCD3-205ENST00000464541 PLCH2O75038 1416 aa2.76□□□□□ -1.97
PTCD3-205ENST00000464541 NID2Q14112 1375 aa2.75□□□□□ -1.97
PTCD3-205ENST00000464541 BORCS7-ASMTA0A0B4J1R7 106 aa2.75□□□□□ -1.97
PTCD3-205ENST00000464541 A0A1B0GW54 56 aa2.75□□□□□ -1.97
PTCD3-205ENST00000464541 LEUTXA8MZ59 168 aa2.75□□□□□ -1.97
PTCD3-205ENST00000464541 J3QRK9 145 aa2.75□□□□□ -1.97
PTCD3-205ENST00000464541 NDUFA2O43678 99 aa2.75□□□□□ -1.97
PTCD3-205ENST00000464541 OR7C2O60412 319 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms