RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 AGTRAPQ6RW13 159 aa2.08□□□□□ -2.08
HMGXB4-205ENST00000464480 OPN5Q6U736 354 aa2.08□□□□□ -2.08
HMGXB4-205ENST00000464480 IGFL1Q6UW32 110 aa2.08□□□□□ -2.08
HMGXB4-205ENST00000464480 ZNF645Q8N7E2 425 aa2.08□□□□□ -2.08
HMGXB4-205ENST00000464480 TCTEX1D1Q8N7M0 179 aa2.08□□□□□ -2.08
HMGXB4-205ENST00000464480 ST6GALNAC3Q8NDV1 305 aa2.08□□□□□ -2.08
HMGXB4-205ENST00000464480 OR2Z1Q8NG97 314 aa2.08□□□□□ -2.08
HMGXB4-205ENST00000464480 OR4D11Q8NGI4 311 aa2.08□□□□□ -2.08
HMGXB4-205ENST00000464480 HAVCR2Q8TDQ0 301 aa2.08□□□□□ -2.08
HMGXB4-205ENST00000464480 WDR34Q96EX3 536 aa2.08□□□□□ -2.08
HMGXB4-205ENST00000464480 IMP4Q96G21 291 aaKnown RBP2.08□□□□□ -2.08
HMGXB4-205ENST00000464480 SLC35G5Q96KT7 338 aa2.08□□□□□ -2.08
HMGXB4-205ENST00000464480 ZNF75AQ96N20 296 aa2.08□□□□□ -2.08
HMGXB4-205ENST00000464480 RDH12Q96NR8 316 aa2.08□□□□□ -2.08
HMGXB4-205ENST00000464480 HSPB9Q9BQS6 159 aa2.08□□□□□ -2.08
HMGXB4-205ENST00000464480 MARVELD1Q9BSK0 173 aa2.08□□□□□ -2.08
HMGXB4-205ENST00000464480 PECRQ9BY49 303 aa2.08□□□□□ -2.08
HMGXB4-205ENST00000464480 OR2J1Q9GZK6 312 aa2.08□□□□□ -2.08
HMGXB4-205ENST00000464480 MAP1LC3BQ9GZQ8 125 aa2.08□□□□□ -2.08
HMGXB4-205ENST00000464480 ZNF442Q9H7R0 627 aa2.08□□□□□ -2.08
HMGXB4-205ENST00000464480 REEP1Q9H902 201 aa2.08□□□□□ -2.08
HMGXB4-205ENST00000464480 ENY2Q9NPA8 101 aa2.08□□□□□ -2.08
HMGXB4-205ENST00000464480 PRSS16Q9NQE7 514 aa2.08□□□□□ -2.08
HMGXB4-205ENST00000464480 RBFOX1Q9NWB1 397 aaKnown RBP2.08□□□□□ -2.08
HMGXB4-205ENST00000464480 MRPL16Q9NX20 251 aaKnown RBP2.08□□□□□ -2.08
HMGXB4-205ENST00000464480 C21orf62Q9NYP8 219 aa2.08□□□□□ -2.08
HMGXB4-205ENST00000464480 OPTCQ9UBM4 332 aa2.08□□□□□ -2.08
HMGXB4-205ENST00000464480 NAT8Q9UHE5 227 aa2.08□□□□□ -2.08
HMGXB4-205ENST00000464480 HSPB8Q9UJY1 196 aa2.08□□□□□ -2.08
HMGXB4-205ENST00000464480 VPREB3Q9UKI3 123 aa2.08□□□□□ -2.08
HMGXB4-205ENST00000464480 MCTS1Q9ULC4 181 aaKnown RBP2.08□□□□□ -2.08
HMGXB4-205ENST00000464480 SIGLEC9Q9Y336 463 aa2.08□□□□□ -2.08
HMGXB4-205ENST00000464480 LSM5Q9Y4Y9 91 aaKnown RBP2.08□□□□□ -2.08
HMGXB4-205ENST00000464480 ORC6Q9Y5N6 252 aa2.08□□□□□ -2.08
HMGXB4-205ENST00000464480 MYH9P35579 1960 aaKnown RBP2.08□□□□□ -2.08
HMGXB4-205ENST00000464480 TRPM3Q9HCF6 1732 aaPredicted RBP2.08□□□□□ -2.08
HMGXB4-205ENST00000464480 N4BP2Q86UW6 1770 aaPredicted RBP2.08□□□□□ -2.08
HMGXB4-205ENST00000464480 CASKIN1Q8WXD9 1431 aa2.08□□□□□ -2.08
HMGXB4-205ENST00000464480 KIF1BO60333 1816 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 PHIPQ8WWQ0 1821 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 ABCA8O94911 1581 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 TOP2BQ02880 1626 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 ADCY10Q96PN6 1610 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 IGKV1-27A0A075B6S5 117 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 TRAV38-1A0A0B4J264 116 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 SPRR5A0A1B0GTR4 108 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 TMEM189A5PLL7 270 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 PLPP3O14495 311 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 HMGB3O15347 200 aaKnown RBP2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 FABP7O15540 132 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 CNMDO75829 334 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 TRAPPC6AO75865 159 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 PMP2P02689 132 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 OPN1SWP03999 348 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 KLK1P06870 262 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 LIPCP11150 499 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 SPNP16150 400 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 CD34P28906 385 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 GABRA2P47869 451 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 INPP1P49441 399 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 GNG4P50150 75 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 AKR1C2P52895 323 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 AQP5P55064 265 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 TCL1AP56279 114 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 KRTAP10-8P60410 259 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 S100A10P60903 97 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 RHOBP62745 196 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 UBA52P62987 128 aaKnown RBP2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 RHOGP84095 191 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 RUNX1Q01196 453 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 SSX1Q16384 188 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 SLC25A35Q3KQZ1 300 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 C10orf91Q5T1B1 145 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 CPTPQ5TA50 214 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 TMEM244Q5VVB8 128 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 NXNL2Q5VZ03 156 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 ZFAND6Q6FIF0 208 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 RPL22L1Q6P5R6 122 aaKnown RBP2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 ZNF705AQ6ZN79 300 aaPredicted RBP2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 Q6ZSR6 202 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 LYPD1Q8N2G4 141 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 OSR2Q8N2R0 312 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 LRRC25Q8N386 305 aaPredicted RBP2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 OR51Q1Q8NH59 317 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 OR1L1Q8NH94 360 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 OR2AE1Q8NHA4 323 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 Q8WTZ3 238 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 HIST1H2BAQ96A08 127 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 SMIM19Q96E16 107 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 GPR82Q96P67 336 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 OR4K3Q96R72 315 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 LYSMD1Q96S90 227 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 MIEN1Q9BRT3 115 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 GINS3Q9BRX5 216 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 DOHHQ9BU89 302 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 EFCAB11Q9BUY7 163 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 ZNF471Q9BX82 626 aaPredicted RBP2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 CDCA4Q9BXL8 241 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 KRTAP4-3Q9BYR4 195 aa2.07□□□□□ -2.08
HMGXB4-205ENST00000464480 NAA50Q9GZZ1 169 aaKnown RBP2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms