RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 RAB8BQ92930 207 aa1.55□□□□□ -2.16
CLK1-208ENST00000464454 GPR84Q9NQS5 396 aa1.55□□□□□ -2.16
CLK1-208ENST00000464454 IGHV3-64A0A075B6Q5 118 aa1.54□□□□□ -2.16
CLK1-208ENST00000464454 TMSB15BA0A087X1C1 80 aa1.54□□□□□ -2.16
CLK1-208ENST00000464454 OR4C45A6NMZ5 311 aa1.54□□□□□ -2.16
CLK1-208ENST00000464454 ACOX3O15254 700 aa1.54□□□□□ -2.16
CLK1-208ENST00000464454 KLRC4O43908 158 aa1.54□□□□□ -2.16
CLK1-208ENST00000464454 KRT7P08729 469 aa1.54□□□□□ -2.16
CLK1-208ENST00000464454 IDH3GP51553 393 aaPredicted RBP1.54□□□□□ -2.16
CLK1-208ENST00000464454 EMP1P54849 157 aa1.54□□□□□ -2.16
CLK1-208ENST00000464454 TMEM258P61165 79 aa1.54□□□□□ -2.16
CLK1-208ENST00000464454 MRPS15P82914 257 aaKnown RBP1.54□□□□□ -2.16
CLK1-208ENST00000464454 GLO1Q04760 184 aa1.54□□□□□ -2.16
CLK1-208ENST00000464454 AKR1C1Q04828 323 aa1.54□□□□□ -2.16
CLK1-208ENST00000464454 SYPL2Q5VXT5 272 aa1.54□□□□□ -2.16
CLK1-208ENST00000464454 OR10K2Q6IF99 312 aa1.54□□□□□ -2.16
CLK1-208ENST00000464454 CD200R1LQ6Q8B3 271 aa1.54□□□□□ -2.16
CLK1-208ENST00000464454 ZNF550Q7Z398 422 aa1.54□□□□□ -2.16
CLK1-208ENST00000464454 DCXRQ7Z4W1 244 aa1.54□□□□□ -2.16
CLK1-208ENST00000464454 SLC22A24Q8N4F4 322 aa1.54□□□□□ -2.16
CLK1-208ENST00000464454 OR51T1Q8NGJ9 327 aa1.54□□□□□ -2.16
CLK1-208ENST00000464454 RNF133Q8WVZ7 376 aa1.54□□□□□ -2.16
CLK1-208ENST00000464454 CXorf21Q9HAI6 301 aa1.54□□□□□ -2.16
CLK1-208ENST00000464454 AK3Q9UIJ7 227 aa1.54□□□□□ -2.16
CLK1-208ENST00000464454 PRELID1Q9Y255 219 aa1.54□□□□□ -2.16
CLK1-208ENST00000464454 COQ4Q9Y3A0 265 aa1.54□□□□□ -2.16
CLK1-208ENST00000464454 PXMP4Q9Y6I8 212 aa1.54□□□□□ -2.16
CLK1-208ENST00000464454 A0A1B0GVG6 124 aa1.53□□□□□ -2.16
CLK1-208ENST00000464454 TMEM210A6NLX4 147 aa1.53□□□□□ -2.16
CLK1-208ENST00000464454 SIGLEC16A6NMB1 481 aa1.53□□□□□ -2.16
CLK1-208ENST00000464454 ISG15P05161 165 aa1.53□□□□□ -2.16
CLK1-208ENST00000464454 CCL1P22362 96 aa1.53□□□□□ -2.16
CLK1-208ENST00000464454 PSMB8P28062 276 aa1.53□□□□□ -2.16
CLK1-208ENST00000464454 NAA20P61599 178 aa1.53□□□□□ -2.16
CLK1-208ENST00000464454 EMX1Q04741 257 aaPredicted RBP1.53□□□□□ -2.16
CLK1-208ENST00000464454 FABP9Q0Z7S8 132 aa1.53□□□□□ -2.16
CLK1-208ENST00000464454 IMPG1Q17R60 797 aa1.53□□□□□ -2.16
CLK1-208ENST00000464454 KIAA2026Q5HYC2 2103 aa1.53□□□□□ -2.16
CLK1-208ENST00000464454 LYZL1Q6UWQ5 148 aa1.53□□□□□ -2.16
CLK1-208ENST00000464454 C10orf67Q8IYJ2 551 aa1.53□□□□□ -2.16
CLK1-208ENST00000464454 DIRAS2Q96HU8 199 aa1.53□□□□□ -2.16
CLK1-208ENST00000464454 PARD6GQ9BYG4 376 aaPredicted RBP1.53□□□□□ -2.16
CLK1-208ENST00000464454 ZFHX2Q9C0A1 2572 aaPredicted RBP1.53□□□□□ -2.16
CLK1-208ENST00000464454 PSTPIP2Q9H939 334 aa1.53□□□□□ -2.16
CLK1-208ENST00000464454 EVC2Q86UK5 1308 aa1.52□□□□□ -2.17
CLK1-208ENST00000464454 A0A0J9YW62 118 aa1.52□□□□□ -2.17
CLK1-208ENST00000464454 CTXN2P0C2S0 81 aa1.52□□□□□ -2.17
CLK1-208ENST00000464454 ALDH3A1P30838 453 aa1.52□□□□□ -2.17
CLK1-208ENST00000464454 CCR7P32248 378 aa1.52□□□□□ -2.17
CLK1-208ENST00000464454 CCR2P41597 374 aa1.52□□□□□ -2.17
CLK1-208ENST00000464454 MAP2K4P45985 399 aa1.52□□□□□ -2.17
CLK1-208ENST00000464454 REG1BP48304 166 aa1.52□□□□□ -2.17
CLK1-208ENST00000464454 TPI1P60174 286 aa1.52□□□□□ -2.17
CLK1-208ENST00000464454 TNFAIP6P98066 277 aaPredicted RBP1.52□□□□□ -2.17
CLK1-208ENST00000464454 COQ5Q5HYK3 327 aa1.52□□□□□ -2.17
CLK1-208ENST00000464454 GID4Q8IVV7 300 aa1.52□□□□□ -2.17
CLK1-208ENST00000464454 TBC1D19Q8N5T2 526 aa1.52□□□□□ -2.17
CLK1-208ENST00000464454 GPR32P1Q8NGA4 272 aa1.52□□□□□ -2.17
CLK1-208ENST00000464454 OR1L8Q8NGR8 309 aa1.52□□□□□ -2.17
CLK1-208ENST00000464454 SGMS2Q8NHU3 365 aa1.52□□□□□ -2.17
CLK1-208ENST00000464454 OPTNQ96CV9 577 aa1.52□□□□□ -2.17
CLK1-208ENST00000464454 MRPS26Q9BYN8 205 aaKnown RBP1.52□□□□□ -2.17
CLK1-208ENST00000464454 XAGE1AQ9HD64 81 aa1.52□□□□□ -2.17
CLK1-208ENST00000464454 RBM7Q9Y580 266 aaKnown RBP1.52□□□□□ -2.17
CLK1-208ENST00000464454 TIMM9Q9Y5J7 89 aa1.52□□□□□ -2.17
CLK1-208ENST00000464454 PTPRSQ13332 1948 aa1.51□□□□□ -2.17
CLK1-208ENST00000464454 TMEM269A0A1B0GVZ9 245 aa1.51□□□□□ -2.17
CLK1-208ENST00000464454 EVPLLA8MZ36 301 aa1.51□□□□□ -2.17
CLK1-208ENST00000464454 LST1O00453 97 aa1.51□□□□□ -2.17
CLK1-208ENST00000464454 PLA2G10O15496 165 aa1.51□□□□□ -2.17
CLK1-208ENST00000464454 CREBL2O60519 120 aaPredicted RBP1.51□□□□□ -2.17
CLK1-208ENST00000464454 DCTN3O75935 186 aa1.51□□□□□ -2.17
CLK1-208ENST00000464454 CALB1P05937 261 aa1.51□□□□□ -2.17
CLK1-208ENST00000464454 GPX1P07203 203 aa1.51□□□□□ -2.17
CLK1-208ENST00000464454 MARCKSL1P49006 195 aa1.51□□□□□ -2.17
CLK1-208ENST00000464454 RPL30P62888 115 aaKnown RBP1.51□□□□□ -2.17
CLK1-208ENST00000464454 ZNF791Q3KP31 576 aaPredicted RBP1.51□□□□□ -2.17
CLK1-208ENST00000464454 ZNF705AQ6ZN79 300 aaPredicted RBP1.51□□□□□ -2.17
CLK1-208ENST00000464454 SSX8Q7RTT4 187 aa1.51□□□□□ -2.17
CLK1-208ENST00000464454 LRRC28Q86X40 367 aaPredicted RBP1.51□□□□□ -2.17
CLK1-208ENST00000464454 DEFB125Q8N687 156 aa1.51□□□□□ -2.17
CLK1-208ENST00000464454 OR8B12Q8NGG6 310 aa1.51□□□□□ -2.17
CLK1-208ENST00000464454 SPACA4Q8TDM5 124 aa1.51□□□□□ -2.17
CLK1-208ENST00000464454 ASB17Q8WXJ9 295 aa1.51□□□□□ -2.17
CLK1-208ENST00000464454 SLC7A6Q92536 515 aa1.51□□□□□ -2.17
CLK1-208ENST00000464454 ANP32BQ92688 251 aaKnown RBP1.51□□□□□ -2.17
CLK1-208ENST00000464454 PTH2Q96A98 100 aa1.51□□□□□ -2.17
CLK1-208ENST00000464454 IMMP2LQ96T52 175 aa1.51□□□□□ -2.17
CLK1-208ENST00000464454 FAM96AQ9H5X1 160 aa1.51□□□□□ -2.17
CLK1-208ENST00000464454 FN1P02751 2386 aaKnown RBP1.51□□□□□ -2.17
CLK1-208ENST00000464454 CR1P17927 2039 aa1.5□□□□□ -2.17
CLK1-208ENST00000464454 CUL9Q8IWT3 2517 aa1.5□□□□□ -2.17
CLK1-208ENST00000464454 ZNF705FA8MVS1 300 aaPredicted RBP1.5□□□□□ -2.17
CLK1-208ENST00000464454 LGALS1P09382 135 aaKnown RBP1.5□□□□□ -2.17
CLK1-208ENST00000464454 RAB13P51153 203 aa1.5□□□□□ -2.17
CLK1-208ENST00000464454 CAV1Q03135 178 aa1.5□□□□□ -2.17
CLK1-208ENST00000464454 SLC38A11Q08AI6 406 aa1.5□□□□□ -2.17
CLK1-208ENST00000464454 NUMA1Q14980 2115 aa1.5□□□□□ -2.17
CLK1-208ENST00000464454 TNFAIP8L3Q5GJ75 292 aa1.5□□□□□ -2.17
CLK1-208ENST00000464454 TMEM42Q69YG0 159 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms