RNA–Protein interactions for RNA: ENST00000463222.1

VRK2-208, Transcript of vaccinia related kinase 2, humanhuman

TSL 3

Gene VRK2, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-208ENST00000463222 CRYBB3P26998 211 aa2.35□□□□□ -2.03
VRK2-208ENST00000463222 TSPEAR-AS2P59090 65 aa2.35□□□□□ -2.03
VRK2-208ENST00000463222 TAS2R45P59539 299 aa2.35□□□□□ -2.03
VRK2-208ENST00000463222 TMEM176BQ3YBM2 270 aaPredicted RBP2.35□□□□□ -2.03
VRK2-208ENST00000463222 SPIN3Q5JUX0 258 aa2.35□□□□□ -2.03
VRK2-208ENST00000463222 C1orf194Q5T5A4 169 aa2.35□□□□□ -2.03
VRK2-208ENST00000463222 FAM78BQ5VT40 261 aa2.35□□□□□ -2.03
VRK2-208ENST00000463222 SFXN4Q6P4A7 337 aa2.35□□□□□ -2.03
VRK2-208ENST00000463222 SBSNQ6UWP8 590 aa2.35□□□□□ -2.03
VRK2-208ENST00000463222 LY6G5BQ8NDX9 201 aa2.35□□□□□ -2.03
VRK2-208ENST00000463222 OR8K1Q8NGG5 319 aa2.35□□□□□ -2.03
VRK2-208ENST00000463222 OR2T27Q8NH04 317 aa2.35□□□□□ -2.03
VRK2-208ENST00000463222 C16orf78Q8WTQ4 265 aa2.35□□□□□ -2.03
VRK2-208ENST00000463222 MS4A6EQ96DS6 147 aa2.35□□□□□ -2.03
VRK2-208ENST00000463222 DIRAS2Q96HU8 199 aa2.35□□□□□ -2.03
VRK2-208ENST00000463222 MGLLQ99685 303 aa2.35□□□□□ -2.03
VRK2-208ENST00000463222 TM2D3Q9BRN9 247 aa2.35□□□□□ -2.03
VRK2-208ENST00000463222 OR51I2Q9H344 312 aa2.35□□□□□ -2.03
VRK2-208ENST00000463222 C11orf1Q9H5F2 150 aa2.35□□□□□ -2.03
VRK2-208ENST00000463222 C16orf95Q9H693 158 aa2.35□□□□□ -2.03
VRK2-208ENST00000463222 MRPL16Q9NX20 251 aaKnown RBP2.35□□□□□ -2.03
VRK2-208ENST00000463222 MCTS1Q9ULC4 181 aaKnown RBP2.35□□□□□ -2.03
VRK2-208ENST00000463222 ADGRB2O60241 1585 aa2.35□□□□□ -2.03
VRK2-208ENST00000463222 ITGB4P16144 1822 aa2.35□□□□□ -2.03
VRK2-208ENST00000463222 LTBP2Q14767 1821 aa2.35□□□□□ -2.03
VRK2-208ENST00000463222 SHPRHQ149N8 1683 aa2.34□□□□□ -2.03
VRK2-208ENST00000463222 KNDC1Q76NI1 1749 aa2.34□□□□□ -2.03
VRK2-208ENST00000463222 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.34□□□□□ -2.03
VRK2-208ENST00000463222 C1orf167Q5SNV9 1468 aa2.34□□□□□ -2.03
VRK2-208ENST00000463222 PXDNQ92626 1479 aa2.34□□□□□ -2.03
VRK2-208ENST00000463222 PPLO60437 1756 aa2.34□□□□□ -2.03
VRK2-208ENST00000463222 C17orf98A8MV24 154 aa2.34□□□□□ -2.03
VRK2-208ENST00000463222 TP53I11O14683 189 aa2.34□□□□□ -2.03
VRK2-208ENST00000463222 IFNA16P05015 189 aa2.34□□□□□ -2.03
VRK2-208ENST00000463222 CCL1P22362 96 aa2.34□□□□□ -2.03
VRK2-208ENST00000463222 SERPINB10P48595 397 aa2.34□□□□□ -2.03
VRK2-208ENST00000463222 BTN3A2P78410 334 aa2.34□□□□□ -2.03
VRK2-208ENST00000463222 EMX1Q04741 257 aaPredicted RBP2.34□□□□□ -2.03
VRK2-208ENST00000463222 CALHM3Q86XJ0 350 aa2.34□□□□□ -2.03
VRK2-208ENST00000463222 TRAPPC5Q8IUR0 188 aa2.34□□□□□ -2.03
VRK2-208ENST00000463222 OR2D3Q8NGH3 330 aa2.34□□□□□ -2.03
VRK2-208ENST00000463222 JOSD2Q8TAC2 188 aa2.34□□□□□ -2.03
VRK2-208ENST00000463222 RNASE6Q93091 150 aaKnown RBP2.34□□□□□ -2.03
VRK2-208ENST00000463222 SLC35G5Q96KT7 338 aa2.34□□□□□ -2.03
VRK2-208ENST00000463222 CAPZA3Q96KX2 299 aa2.34□□□□□ -2.03
VRK2-208ENST00000463222 PKMYT1Q99640 499 aa2.34□□□□□ -2.03
VRK2-208ENST00000463222 OR51V1Q9H2C8 321 aa2.34□□□□□ -2.03
VRK2-208ENST00000463222 CXorf21Q9HAI6 301 aa2.34□□□□□ -2.03
VRK2-208ENST00000463222 SLC2A9Q9NRM0 540 aa2.34□□□□□ -2.03
VRK2-208ENST00000463222 ANAPC10Q9UM13 185 aa2.34□□□□□ -2.03
VRK2-208ENST00000463222 PXMP4Q9Y6I8 212 aa2.34□□□□□ -2.03
VRK2-208ENST00000463222 SIPA1L1O43166 1804 aa2.33□□□□□ -2.04
VRK2-208ENST00000463222 DLC1Q96QB1 1528 aa2.33□□□□□ -2.04
VRK2-208ENST00000463222 A0A1W2PNM2 257 aa2.33□□□□□ -2.04
VRK2-208ENST00000463222 GOLGA6L19H0YKK7 550 aa2.33□□□□□ -2.04
VRK2-208ENST00000463222 UBE2L6O14933 153 aa2.33□□□□□ -2.04
VRK2-208ENST00000463222 CDS2O95674 445 aa2.33□□□□□ -2.04
VRK2-208ENST00000463222 UCHL3P15374 230 aa2.33□□□□□ -2.04
VRK2-208ENST00000463222 NPPCP23582 126 aa2.33□□□□□ -2.04
VRK2-208ENST00000463222 CRHBPP24387 322 aa2.33□□□□□ -2.04
VRK2-208ENST00000463222 COL8A2P25067 703 aa2.33□□□□□ -2.04
VRK2-208ENST00000463222 MRPS15P82914 257 aaKnown RBP2.33□□□□□ -2.04
VRK2-208ENST00000463222 OR2F1Q13607 317 aa2.33□□□□□ -2.04
VRK2-208ENST00000463222 ZNF550Q7Z398 422 aa2.33□□□□□ -2.04
VRK2-208ENST00000463222 UMODL1-AS1Q8N2C9 162 aa2.33□□□□□ -2.04
VRK2-208ENST00000463222 DAND5Q8N907 189 aa2.33□□□□□ -2.04
VRK2-208ENST00000463222 RPS4Y2Q8TD47 263 aa2.33□□□□□ -2.04
VRK2-208ENST00000463222 C12orf43Q96C57 262 aaKnown RBP2.33□□□□□ -2.04
VRK2-208ENST00000463222 NMNAT3Q96T66 252 aa2.33□□□□□ -2.04
VRK2-208ENST00000463222 FKBP14Q9NWM8 211 aa2.33□□□□□ -2.04
VRK2-208ENST00000463222 COQ4Q9Y3A0 265 aa2.33□□□□□ -2.04
VRK2-208ENST00000463222 LSM5Q9Y4Y9 91 aaKnown RBP2.33□□□□□ -2.04
VRK2-208ENST00000463222 DHX57Q6P158 1386 aaKnown RBP2.33□□□□□ -2.04
VRK2-208ENST00000463222 UTRNP46939 3433 aa2.33□□□□□ -2.04
VRK2-208ENST00000463222 CCDC144AA2RUR9 1427 aa2.33□□□□□ -2.04
VRK2-208ENST00000463222 NYNRINQ9P2P1 1898 aaKnown RBP2.33□□□□□ -2.04
VRK2-208ENST00000463222 CDK12Q9NYV4 1490 aaPredicted RBP2.33□□□□□ -2.04
VRK2-208ENST00000463222 DOCK6Q96HP0 2047 aa2.32□□□□□ -2.04
VRK2-208ENST00000463222 USP32Q8NFA0 1604 aa2.32□□□□□ -2.04
VRK2-208ENST00000463222 IGLV10-54A0A075B6I4 117 aa2.32□□□□□ -2.04
VRK2-208ENST00000463222 RPP14O95059 124 aaKnown RBP2.32□□□□□ -2.04
VRK2-208ENST00000463222 APOMO95445 188 aa2.32□□□□□ -2.04
VRK2-208ENST00000463222 CTSGP08311 255 aa2.32□□□□□ -2.04
VRK2-208ENST00000463222 CCL3P10147 92 aa2.32□□□□□ -2.04
VRK2-208ENST00000463222 CPMP14384 443 aa2.32□□□□□ -2.04
VRK2-208ENST00000463222 LPAR6P43657 344 aa2.32□□□□□ -2.04
VRK2-208ENST00000463222 LSM6P62312 80 aaKnown RBP2.32□□□□□ -2.04
VRK2-208ENST00000463222 AESQ08117 197 aa2.32□□□□□ -2.04
VRK2-208ENST00000463222 FADDQ13158 208 aa2.32□□□□□ -2.04
VRK2-208ENST00000463222 UAP1Q16222 522 aaPredicted RBP2.32□□□□□ -2.04
VRK2-208ENST00000463222 BATFQ16520 125 aa2.32□□□□□ -2.04
VRK2-208ENST00000463222 LCE1CQ5T751 118 aa2.32□□□□□ -2.04
VRK2-208ENST00000463222 LCE1BQ5T7P3 118 aa2.32□□□□□ -2.04
VRK2-208ENST00000463222 HIST2H3PS2Q5TEC6 136 aa2.32□□□□□ -2.04
VRK2-208ENST00000463222 AMTNQ6UX39 209 aa2.32□□□□□ -2.04
VRK2-208ENST00000463222 FNDC9Q8TBE3 224 aa2.32□□□□□ -2.04
VRK2-208ENST00000463222 RAB2BQ8WUD1 216 aa2.32□□□□□ -2.04
VRK2-208ENST00000463222 TMA16Q96EY4 203 aaKnown RBP2.32□□□□□ -2.04
VRK2-208ENST00000463222 CPNE2Q96FN4 548 aaPredicted RBP2.32□□□□□ -2.04
VRK2-208ENST00000463222 CCL13Q99616 98 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms