RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 CA7P43166 264 aa2.17□□□□□ -2.06
USH2A-203ENST00000463147 SLCO1A2P46721 670 aa2.17□□□□□ -2.06
USH2A-203ENST00000463147 RPL5P46777 297 aaKnown RBP2.17□□□□□ -2.06
USH2A-203ENST00000463147 TMED2Q15363 201 aa2.17□□□□□ -2.06
USH2A-203ENST00000463147 PRR9Q5T870 116 aa2.17□□□□□ -2.06
USH2A-203ENST00000463147 SPOPLQ6IQ16 392 aa2.17□□□□□ -2.06
USH2A-203ENST00000463147 C4orf22Q6V702 233 aa2.17□□□□□ -2.06
USH2A-203ENST00000463147 SDIM1Q6ZPB5 146 aa2.17□□□□□ -2.06
USH2A-203ENST00000463147 LYZL2Q7Z4W2 148 aa2.17□□□□□ -2.06
USH2A-203ENST00000463147 CLVS1Q8IUQ0 354 aaPredicted RBP2.17□□□□□ -2.06
USH2A-203ENST00000463147 C1orf158Q8N1D5 194 aa2.17□□□□□ -2.06
USH2A-203ENST00000463147 UMODL1-AS1Q8N2C9 162 aa2.17□□□□□ -2.06
USH2A-203ENST00000463147 ZNF561Q8N587 486 aa2.17□□□□□ -2.06
USH2A-203ENST00000463147 EIF4E3Q8N5X7 224 aaKnown RBP2.17□□□□□ -2.06
USH2A-203ENST00000463147 CLDN22Q8N7P3 220 aa2.17□□□□□ -2.06
USH2A-203ENST00000463147 OR2T27Q8NH04 317 aa2.17□□□□□ -2.06
USH2A-203ENST00000463147 OR5P3Q8WZ94 311 aa2.17□□□□□ -2.06
USH2A-203ENST00000463147 BORCS5Q969J3 196 aa2.17□□□□□ -2.06
USH2A-203ENST00000463147 MAGOHBQ96A72 148 aaKnown RBP2.17□□□□□ -2.06
USH2A-203ENST00000463147 DIRAS2Q96HU8 199 aa2.17□□□□□ -2.06
USH2A-203ENST00000463147 PECRQ9BY49 303 aa2.17□□□□□ -2.06
USH2A-203ENST00000463147 Q9H521 79 aa2.17□□□□□ -2.06
USH2A-203ENST00000463147 C11orf1Q9H5F2 150 aa2.17□□□□□ -2.06
USH2A-203ENST00000463147 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.17□□□□□ -2.06
USH2A-203ENST00000463147 UTP11Q9Y3A2 253 aaKnown RBP2.17□□□□□ -2.06
USH2A-203ENST00000463147 ZNF337Q9Y3M9 751 aa2.17□□□□□ -2.06
USH2A-203ENST00000463147 NUP155O75694 1391 aa2.17□□□□□ -2.06
USH2A-203ENST00000463147 ABCC10Q5T3U5 1492 aa2.17□□□□□ -2.06
USH2A-203ENST00000463147 ADGRB2O60241 1585 aa2.17□□□□□ -2.06
USH2A-203ENST00000463147 CASZ1Q86V15 1759 aa2.17□□□□□ -2.06
USH2A-203ENST00000463147 RNF17Q9BXT8 1623 aaKnown RBP2.17□□□□□ -2.06
USH2A-203ENST00000463147 ABCC5O15440 1437 aa2.17□□□□□ -2.06
USH2A-203ENST00000463147 SEC16AO15027 2179 aa2.16□□□□□ -2.06
USH2A-203ENST00000463147 KDM5AP29375 1690 aaKnown RBP2.16□□□□□ -2.06
USH2A-203ENST00000463147 SHPRHQ149N8 1683 aa2.16□□□□□ -2.06
USH2A-203ENST00000463147 ARHGEF5Q12774 1597 aa2.16□□□□□ -2.06
USH2A-203ENST00000463147 FLT4P35916 1363 aa2.16□□□□□ -2.06
USH2A-203ENST00000463147 SIGLEC16A6NMB1 481 aa2.16□□□□□ -2.06
USH2A-203ENST00000463147 KPNA4O00629 521 aaPredicted RBP2.16□□□□□ -2.06
USH2A-203ENST00000463147 GSTZ1O43708 216 aaPredicted RBP2.16□□□□□ -2.06
USH2A-203ENST00000463147 CPSF4O95639 269 aaKnown RBP2.16□□□□□ -2.06
USH2A-203ENST00000463147 MT-CO2P00403 227 aa2.16□□□□□ -2.06
USH2A-203ENST00000463147 CD7P09564 240 aa2.16□□□□□ -2.06
USH2A-203ENST00000463147 FAM228BP0C875 321 aa2.16□□□□□ -2.06
USH2A-203ENST00000463147 IGHV3-30-3P0DP02 117 aa2.16□□□□□ -2.06
USH2A-203ENST00000463147 CCL3P10147 92 aa2.16□□□□□ -2.06
USH2A-203ENST00000463147 MARCKSL1P49006 195 aa2.16□□□□□ -2.06
USH2A-203ENST00000463147 IDH3GP51553 393 aaPredicted RBP2.16□□□□□ -2.06
USH2A-203ENST00000463147 TSPEAR-AS2P59090 65 aa2.16□□□□□ -2.06
USH2A-203ENST00000463147 GNG2P59768 71 aa2.16□□□□□ -2.06
USH2A-203ENST00000463147 RUNX1Q01196 453 aa2.16□□□□□ -2.06
USH2A-203ENST00000463147 SRSF6Q13247 344 aaKnown RBP2.16□□□□□ -2.06
USH2A-203ENST00000463147 IGFBP7Q16270 282 aa2.16□□□□□ -2.06
USH2A-203ENST00000463147 MOGQ16653 247 aa2.16□□□□□ -2.06
USH2A-203ENST00000463147 HIST3H3Q16695 136 aa2.16□□□□□ -2.06
USH2A-203ENST00000463147 FAM78BQ5VT40 261 aa2.16□□□□□ -2.06
USH2A-203ENST00000463147 DHRS4L2Q6PKH6 230 aa2.16□□□□□ -2.06
USH2A-203ENST00000463147 IDO2Q6ZQW0 420 aa2.16□□□□□ -2.06
USH2A-203ENST00000463147 HIST2H3AQ71DI3 136 aa2.16□□□□□ -2.06
USH2A-203ENST00000463147 S100A7AQ86SG5 101 aa2.16□□□□□ -2.06
USH2A-203ENST00000463147 ZNF664Q8N3J9 261 aa2.16□□□□□ -2.06
USH2A-203ENST00000463147 LY6G5BQ8NDX9 201 aa2.16□□□□□ -2.06
USH2A-203ENST00000463147 OR1L8Q8NGR8 309 aa2.16□□□□□ -2.06
USH2A-203ENST00000463147 JOSD2Q8TAC2 188 aa2.16□□□□□ -2.06
USH2A-203ENST00000463147 MUC7Q8TAX7 377 aa2.16□□□□□ -2.06
USH2A-203ENST00000463147 LMX1AQ8TE12 382 aa2.16□□□□□ -2.06
USH2A-203ENST00000463147 KLK6Q92876 244 aa2.16□□□□□ -2.06
USH2A-203ENST00000463147 TMA16Q96EY4 203 aaKnown RBP2.16□□□□□ -2.06
USH2A-203ENST00000463147 IMP4Q96G21 291 aaKnown RBP2.16□□□□□ -2.06
USH2A-203ENST00000463147 OR51I2Q9H344 312 aa2.16□□□□□ -2.06
USH2A-203ENST00000463147 SNX12Q9UMY4 172 aa2.16□□□□□ -2.06
USH2A-203ENST00000463147 PXMP4Q9Y6I8 212 aa2.16□□□□□ -2.06
USH2A-203ENST00000463147 ABCC3O15438 1527 aa2.16□□□□□ -2.06
USH2A-203ENST00000463147 CD109Q6YHK3 1445 aa2.16□□□□□ -2.06
USH2A-203ENST00000463147 CROCC2H7BZ55 1655 aa2.15□□□□□ -2.06
USH2A-203ENST00000463147 MAST1Q9Y2H9 1570 aa2.15□□□□□ -2.06
USH2A-203ENST00000463147 ZNF518AQ6AHZ1 1483 aa2.15□□□□□ -2.06
USH2A-203ENST00000463147 CDK12Q9NYV4 1490 aaPredicted RBP2.15□□□□□ -2.06
USH2A-203ENST00000463147 SHANK1Q9Y566 2161 aa2.15□□□□□ -2.07
USH2A-203ENST00000463147 A0A1W2PQ67 120 aa2.15□□□□□ -2.07
USH2A-203ENST00000463147 C17orf98A8MV24 154 aa2.15□□□□□ -2.07
USH2A-203ENST00000463147 SLC22A1O15245 554 aa2.15□□□□□ -2.07
USH2A-203ENST00000463147 FADS1O60427 444 aa2.15□□□□□ -2.07
USH2A-203ENST00000463147 OR5F1O95221 314 aa2.15□□□□□ -2.07
USH2A-203ENST00000463147 APOMO95445 188 aa2.15□□□□□ -2.07
USH2A-203ENST00000463147 HLA-DQB2P05538 268 aa2.15□□□□□ -2.07
USH2A-203ENST00000463147 ESDP10768 282 aa2.15□□□□□ -2.07
USH2A-203ENST00000463147 CRABP1P29762 137 aa2.15□□□□□ -2.07
USH2A-203ENST00000463147 SULT1A1P50225 295 aa2.15□□□□□ -2.07
USH2A-203ENST00000463147 SPCS3P61009 180 aa2.15□□□□□ -2.07
USH2A-203ENST00000463147 S100A12P80511 92 aa2.15□□□□□ -2.07
USH2A-203ENST00000463147 TNFAIP6P98066 277 aaPredicted RBP2.15□□□□□ -2.07
USH2A-203ENST00000463147 FLI1Q01543 452 aaPredicted RBP2.15□□□□□ -2.07
USH2A-203ENST00000463147 GLO1Q04760 184 aa2.15□□□□□ -2.07
USH2A-203ENST00000463147 KCNJ8Q15842 424 aa2.15□□□□□ -2.07
USH2A-203ENST00000463147 LGALS9BQ3B8N2 356 aa2.15□□□□□ -2.07
USH2A-203ENST00000463147 LGALSLQ3ZCW2 172 aaPredicted RBP2.15□□□□□ -2.07
USH2A-203ENST00000463147 PYCR3Q53H96 274 aa2.15□□□□□ -2.07
USH2A-203ENST00000463147 SPIN3Q5JUX0 258 aa2.15□□□□□ -2.07
USH2A-203ENST00000463147 FAM201AQ5SY85 155 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms