RNA–Protein interactions for RNA: ENST00000462673.1

USP4-207, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 709 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-207ENST00000462673 NOL4LQ96MY1 436 aaPredicted RBP6.41□□□□□ -1.38
USP4-207ENST00000462673 GAFA1Q96PS6 74 aa6.41□□□□□ -1.38
USP4-207ENST00000462673 JMJD8Q96S16 334 aa6.41□□□□□ -1.38
USP4-207ENST00000462673 HIST1H2BNQ99877 126 aa6.41□□□□□ -1.38
USP4-207ENST00000462673 HIST1H2BMQ99879 126 aa6.41□□□□□ -1.38
USP4-207ENST00000462673 SMR3AQ99954 134 aa6.41□□□□□ -1.38
USP4-207ENST00000462673 PARP12Q9H0J9 701 aaKnown RBP6.41□□□□□ -1.38
USP4-207ENST00000462673 SH3BGRL3Q9H299 93 aa6.41□□□□□ -1.38
USP4-207ENST00000462673 GAL3ST2Q9H3Q3 398 aa6.41□□□□□ -1.38
USP4-207ENST00000462673 RIMS4Q9H426 269 aaPredicted RBP6.41□□□□□ -1.38
USP4-207ENST00000462673 GSX1Q9H4S2 264 aaPredicted RBP6.41□□□□□ -1.38
USP4-207ENST00000462673 WFDC1Q9HC57 220 aa6.41□□□□□ -1.38
USP4-207ENST00000462673 ANXA10Q9UJ72 324 aa6.41□□□□□ -1.38
USP4-207ENST00000462673 UBE2J1Q9Y385 318 aaPredicted RBP6.41□□□□□ -1.38
USP4-207ENST00000462673 ITPR3Q14573 2671 aa6.41□□□□□ -1.38
USP4-207ENST00000462673 OTOGQ6ZRI0 2925 aa6.4□□□□□ -1.38
USP4-207ENST00000462673 MYO9AB2RTY4 2548 aa6.4□□□□□ -1.38
USP4-207ENST00000462673 PIGBOS1A0A0B4J2F0 54 aa6.4□□□□□ -1.38
USP4-207ENST00000462673 IGKV1-12A0A0C4DH73 117 aa6.4□□□□□ -1.38
USP4-207ENST00000462673 LOC102723971A0A1B0GUV8 181 aa6.4□□□□□ -1.38
USP4-207ENST00000462673 A0A1W2PP11 408 aa6.4□□□□□ -1.38
USP4-207ENST00000462673 SIRPB1O00241 398 aa6.4□□□□□ -1.38
USP4-207ENST00000462673 CYB5BO43169 146 aa6.4□□□□□ -1.38
USP4-207ENST00000462673 CRLF1O75462 422 aa6.4□□□□□ -1.38
USP4-207ENST00000462673 IGKV1D-12P01611 117 aa6.4□□□□□ -1.38
USP4-207ENST00000462673 RBP4P02753 201 aa6.4□□□□□ -1.38
USP4-207ENST00000462673 OR5AC1P0C628 307 aa6.4□□□□□ -1.38
USP4-207ENST00000462673 OR5H8P0DN80 308 aa6.4□□□□□ -1.38
USP4-207ENST00000462673 SELLP14151 372 aa6.4□□□□□ -1.38
USP4-207ENST00000462673 MMP9P14780 707 aa6.4□□□□□ -1.38
USP4-207ENST00000462673 RND2P52198 227 aa6.4□□□□□ -1.38
USP4-207ENST00000462673 RBM11P57052 281 aaKnown RBP6.4□□□□□ -1.38
USP4-207ENST00000462673 ERVFRD-1P60508 538 aa6.4□□□□□ -1.38
USP4-207ENST00000462673 ARF6P62330 175 aa6.4□□□□□ -1.38
USP4-207ENST00000462673 VAMP2P63027 116 aa6.4□□□□□ -1.38
USP4-207ENST00000462673 GAMTQ14353 236 aa6.4□□□□□ -1.38
USP4-207ENST00000462673 ICAM4Q14773 271 aa6.4□□□□□ -1.38
USP4-207ENST00000462673 ZNF124Q15973 351 aa6.4□□□□□ -1.38
USP4-207ENST00000462673 TRAT1Q6PIZ9 186 aa6.4□□□□□ -1.38
USP4-207ENST00000462673 C1QL2Q7Z5L3 287 aa6.4□□□□□ -1.38
USP4-207ENST00000462673 ZNF429Q86V71 674 aa6.4□□□□□ -1.38
USP4-207ENST00000462673 OR2G3Q8NGZ4 309 aa6.4□□□□□ -1.38
USP4-207ENST00000462673 RTN4IP1Q8WWV3 396 aaPredicted RBP6.4□□□□□ -1.38
USP4-207ENST00000462673 TOMM40LQ969M1 308 aa6.4□□□□□ -1.38
USP4-207ENST00000462673 RCC1LQ96I51 464 aaKnown RBP6.4□□□□□ -1.38
USP4-207ENST00000462673 RHOVQ96L33 236 aa6.4□□□□□ -1.38
USP4-207ENST00000462673 Q96M66 194 aa6.4□□□□□ -1.38
USP4-207ENST00000462673 PACRGQ96M98 296 aaPredicted RBP6.4□□□□□ -1.38
USP4-207ENST00000462673 ZNF286AQ9HBT8 521 aa6.4□□□□□ -1.38
USP4-207ENST00000462673 PLEKHJ1Q9NW61 149 aa6.4□□□□□ -1.38
USP4-207ENST00000462673 PPP1R14DQ9NXH3 145 aa6.4□□□□□ -1.38
USP4-207ENST00000462673 KCNIP1Q9NZI2 227 aa6.4□□□□□ -1.38
USP4-207ENST00000462673 ONECUT1Q9UBC0 465 aa6.4□□□□□ -1.38
USP4-207ENST00000462673 CTSZQ9UBR2 303 aa6.4□□□□□ -1.38
USP4-207ENST00000462673 PITPNC1Q9UKF7 332 aa6.4□□□□□ -1.38
USP4-207ENST00000462673 WSB1Q9Y6I7 421 aa6.4□□□□□ -1.38
USP4-207ENST00000462673 MAP1AP78559 2803 aaPredicted RBP6.39□□□□□ -1.39
USP4-207ENST00000462673 A0A1B0GV50 99 aa6.39□□□□□ -1.39
USP4-207ENST00000462673 KIAA1324LA8MWY0 1029 aaPredicted RBP6.39□□□□□ -1.39
USP4-207ENST00000462673 INAFM1C9JVW0 142 aa6.39□□□□□ -1.39
USP4-207ENST00000462673 SLC33A1O00400 549 aaPredicted RBP6.39□□□□□ -1.39
USP4-207ENST00000462673 HSD17B6O14756 317 aa6.39□□□□□ -1.39
USP4-207ENST00000462673 GEMIN2O14893 280 aaKnown RBP6.39□□□□□ -1.39
USP4-207ENST00000462673 ZNF737O75373 536 aa6.39□□□□□ -1.39
USP4-207ENST00000462673 DFFBO76075 338 aa6.39□□□□□ -1.39
USP4-207ENST00000462673 DIRAS3O95661 229 aa6.39□□□□□ -1.39
USP4-207ENST00000462673 IFNA1P01562 189 aa6.39□□□□□ -1.39
USP4-207ENST00000462673 OPN1MWP04001 364 aa6.39□□□□□ -1.39
USP4-207ENST00000462673 CXCL1P09341 107 aa6.39□□□□□ -1.39
USP4-207ENST00000462673 OPN1MW2P0DN77 364 aa6.39□□□□□ -1.39
USP4-207ENST00000462673 OPN1MW3P0DN78 364 aa6.39□□□□□ -1.39
USP4-207ENST00000462673 FABP4P15090 132 aa6.39□□□□□ -1.39
USP4-207ENST00000462673 RAB4AP20338 218 aa6.39□□□□□ -1.39
USP4-207ENST00000462673 ATP6V0CP27449 155 aa6.39□□□□□ -1.39
USP4-207ENST00000462673 FHITP49789 147 aa6.39□□□□□ -1.39
USP4-207ENST00000462673 UCP3P55916 312 aa6.39□□□□□ -1.39
USP4-207ENST00000462673 LGALS4P56470 323 aa6.39□□□□□ -1.39
USP4-207ENST00000462673 RND3P61587 244 aa6.39□□□□□ -1.39
USP4-207ENST00000462673 HLA-DRB3P79483 266 aa6.39□□□□□ -1.39
USP4-207ENST00000462673 PAX5Q02548 391 aa6.39□□□□□ -1.39
USP4-207ENST00000462673 HNF4GQ14541 408 aa6.39□□□□□ -1.39
USP4-207ENST00000462673 TAF9Q16594 264 aa6.39□□□□□ -1.39
USP4-207ENST00000462673 TMEM200BQ69YZ2 307 aa6.39□□□□□ -1.39
USP4-207ENST00000462673 SLC35E4Q6ICL7 350 aa6.39□□□□□ -1.39
USP4-207ENST00000462673 SPSB3Q6PJ21 355 aa6.39□□□□□ -1.39
USP4-207ENST00000462673 Q71RC1 249 aaPredicted RBP6.39□□□□□ -1.39
USP4-207ENST00000462673 TMEM183AQ8IXX5 376 aa6.39□□□□□ -1.39
USP4-207ENST00000462673 BATF2Q8N1L9 274 aa6.39□□□□□ -1.39
USP4-207ENST00000462673 OR2C3Q8N628 320 aa6.39□□□□□ -1.39
USP4-207ENST00000462673 CYB561D1Q8N8Q1 229 aa6.39□□□□□ -1.39
USP4-207ENST00000462673 OR10A7Q8NGE5 316 aa6.39□□□□□ -1.39
USP4-207ENST00000462673 OR4D5Q8NGN0 318 aa6.39□□□□□ -1.39
USP4-207ENST00000462673 ZNF418Q8TF45 676 aaPredicted RBP6.39□□□□□ -1.39
USP4-207ENST00000462673 CORO2AQ92828 525 aa6.39□□□□□ -1.39
USP4-207ENST00000462673 RAB24Q969Q5 203 aa6.39□□□□□ -1.39
USP4-207ENST00000462673 MOB3AQ96BX8 217 aa6.39□□□□□ -1.39
USP4-207ENST00000462673 BSCL2Q96G97 398 aaPredicted RBP6.39□□□□□ -1.39
USP4-207ENST00000462673 FAM210BQ96KR6 192 aa6.39□□□□□ -1.39
USP4-207ENST00000462673 ZNF714Q96N38 554 aa6.39□□□□□ -1.39
USP4-207ENST00000462673 PCGF1Q9BSM1 259 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms