RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 AARDQ4LEZ3 155 aa13.98□□□□□ -0.17
ACTB-207ENST00000462494 DIRC2Q96SL1 478 aa13.98□□□□□ -0.17
ACTB-207ENST00000462494 PCGF1Q9BSM1 259 aa13.98□□□□□ -0.17
ACTB-207ENST00000462494 SRD5A3Q9H8P0 318 aa13.98□□□□□ -0.17
ACTB-207ENST00000462494 AURKAIP1Q9NWT8 199 aaPredicted RBP13.98□□□□□ -0.17
ACTB-207ENST00000462494 FAM215AQ9Y5M1 114 aa13.98□□□□□ -0.17
ACTB-207ENST00000462494 PPP5D1E7EU14 171 aa13.98□□□□□ -0.17
ACTB-207ENST00000462494 RBFOX2O43251 390 aaKnown RBP eCLIP13.98□□□□□ -0.173e-25■■■■■ 34.8
ACTB-207ENST00000462494 CEACAM4O75871 244 aa13.98□□□□□ -0.17
ACTB-207ENST00000462494 C17orf58Q2M2W7 97 aa13.98□□□□□ -0.17
ACTB-207ENST00000462494 CT45A1Q5HYN5 189 aa13.98□□□□□ -0.17
ACTB-207ENST00000462494 MIC13Q5XKP0 118 aa13.98□□□□□ -0.17
ACTB-207ENST00000462494 ZNF383Q8NA42 475 aa13.98□□□□□ -0.17
ACTB-207ENST00000462494 OR52E5Q8NH55 327 aa13.98□□□□□ -0.17
ACTB-207ENST00000462494 OR4S2Q8NH73 311 aa13.98□□□□□ -0.17
ACTB-207ENST00000462494 CT45A3Q8NHU0 189 aa13.98□□□□□ -0.17
ACTB-207ENST00000462494 MGST2Q99735 147 aa13.98□□□□□ -0.17
ACTB-207ENST00000462494 TCF19Q9Y242 345 aa13.98□□□□□ -0.17
ACTB-207ENST00000462494 TET2Q6N021 2002 aaPredicted RBP13.97□□□□□ -0.17
ACTB-207ENST00000462494 SAA2-SAA4A0A096LPE2 208 aa13.97□□□□□ -0.17
ACTB-207ENST00000462494 LY86O95711 162 aa13.97□□□□□ -0.17
ACTB-207ENST00000462494 SAA2P0DJI9 122 aaPredicted RBP13.97□□□□□ -0.17
ACTB-207ENST00000462494 PXMP4Q9Y6I8 212 aa13.97□□□□□ -0.17
ACTB-207ENST00000462494 MPDU1O75352 247 aa13.96□□□□□ -0.17
ACTB-207ENST00000462494 HRASP01112 189 aa13.96□□□□□ -0.17
ACTB-207ENST00000462494 CHRNA7P36544 502 aa13.96□□□□□ -0.17
ACTB-207ENST00000462494 OPRK1P41145 380 aa13.96□□□□□ -0.17
ACTB-207ENST00000462494 KIR2DS2P43631 304 aa13.96□□□□□ -0.17
ACTB-207ENST00000462494 GNG10P50151 68 aa13.96□□□□□ -0.17
ACTB-207ENST00000462494 RAB7AP51149 207 aa13.96□□□□□ -0.17
ACTB-207ENST00000462494 LYG1Q8N1E2 194 aa13.96□□□□□ -0.17
ACTB-207ENST00000462494 TMEM170AQ8WVE7 144 aa13.96□□□□□ -0.17
ACTB-207ENST00000462494 SSMEM1Q8WWF3 244 aa13.96□□□□□ -0.17
ACTB-207ENST00000462494 ANAPC16Q96DE5 110 aa13.96□□□□□ -0.17
ACTB-207ENST00000462494 GFOD1Q9NXC2 390 aa13.96□□□□□ -0.17
ACTB-207ENST00000462494 SMG1Q96Q15 3661 aaKnown RBP13.96□□□□□ -0.17
ACTB-207ENST00000462494 DSCAMO60469 2012 aa13.96□□□□□ -0.17
ACTB-207ENST00000462494 NDUFB4O95168 129 aa13.96□□□□□ -0.17
ACTB-207ENST00000462494 ARL14EPLP0DKL9 152 aa13.96□□□□□ -0.17
ACTB-207ENST00000462494 GNB1P62873 340 aa13.96□□□□□ -0.17
ACTB-207ENST00000462494 DDB2Q92466 427 aa13.96□□□□□ -0.17
ACTB-207ENST00000462494 RHOVQ96L33 236 aa13.96□□□□□ -0.17
ACTB-207ENST00000462494 TMEM204Q9BSN7 226 aa13.96□□□□□ -0.17
ACTB-207ENST00000462494 DERL1Q9BUN8 251 aa13.96□□□□□ -0.17
ACTB-207ENST00000462494 HINT2Q9BX68 163 aa13.96□□□□□ -0.17
ACTB-207ENST00000462494 DMRT1Q9Y5R6 373 aa13.96□□□□□ -0.17
ACTB-207ENST00000462494 RP1L1Q8IWN7 2480 aaPredicted RBP13.96□□□□□ -0.18
ACTB-207ENST00000462494 TRGV10A0A0A0MS01 117 aa13.95□□□□□ -0.18
ACTB-207ENST00000462494 KBTBD11-OT1A0A1B0GTJ5 212 aa13.95□□□□□ -0.18
ACTB-207ENST00000462494 PDE6DO43924 150 aa13.95□□□□□ -0.18
ACTB-207ENST00000462494 TNFAIP6P98066 277 aaPredicted RBP13.95□□□□□ -0.18
ACTB-207ENST00000462494 C1orf185Q5T7R7 199 aa13.95□□□□□ -0.18
ACTB-207ENST00000462494 FAM216AQ8WUB2 273 aa13.95□□□□□ -0.18
ACTB-207ENST00000462494 PFDN5Q99471 154 aa13.95□□□□□ -0.18
ACTB-207ENST00000462494 PYGO2Q9BRQ0 406 aa13.95□□□□□ -0.18
ACTB-207ENST00000462494 GGTLC1Q9BX51 225 aa13.95□□□□□ -0.18
ACTB-207ENST00000462494 GCM1Q9NP62 436 aa13.95□□□□□ -0.18
ACTB-207ENST00000462494 RNF7Q9UBF6 113 aa13.95□□□□□ -0.18
ACTB-207ENST00000462494 PITPNC1Q9UKF7 332 aa13.95□□□□□ -0.18
ACTB-207ENST00000462494 C15orf61A6NNL5 157 aa13.95□□□□□ -0.18
ACTB-207ENST00000462494 PRSS46E5RG02 174 aa13.95□□□□□ -0.18
ACTB-207ENST00000462494 VENTXO95231 258 aa13.95□□□□□ -0.18
ACTB-207ENST00000462494 CGB3P0DN86 165 aa13.95□□□□□ -0.18
ACTB-207ENST00000462494 CGB7P0DN87 165 aa13.95□□□□□ -0.18
ACTB-207ENST00000462494 SELENOVP59797 346 aa13.95□□□□□ -0.18
ACTB-207ENST00000462494 OR4A47Q6IF82 309 aa13.95□□□□□ -0.18
ACTB-207ENST00000462494 RAB1CQ92928 201 aa13.95□□□□□ -0.18
ACTB-207ENST00000462494 CCL13Q99616 98 aa13.95□□□□□ -0.18
ACTB-207ENST00000462494 MGAQ8IWI9 3026 aa13.94□□□□□ -0.18
ACTB-207ENST00000462494 IGLV3-9A0A075B6K5 115 aa13.94□□□□□ -0.18
ACTB-207ENST00000462494 MYOD1P15172 320 aa13.94□□□□□ -0.18
ACTB-207ENST00000462494 MRPS11P82912 194 aaKnown RBP13.94□□□□□ -0.18
ACTB-207ENST00000462494 FAM27E3Q08E93 113 aa13.94□□□□□ -0.18
ACTB-207ENST00000462494 FAM209BQ5JX69 171 aa13.94□□□□□ -0.18
ACTB-207ENST00000462494 C22orf34Q6ZV56 151 aa13.94□□□□□ -0.18
ACTB-207ENST00000462494 PACRGQ96M98 296 aaPredicted RBP13.94□□□□□ -0.18
ACTB-207ENST00000462494 ENY2Q9NPA8 101 aa13.94□□□□□ -0.18
ACTB-207ENST00000462494 PGPEP1LA6NFU8 196 aa13.94□□□□□ -0.18
ACTB-207ENST00000462494 C9orf152Q5JTZ5 239 aa13.94□□□□□ -0.18
ACTB-207ENST00000462494 TGIF2LYQ8IUE0 185 aa13.94□□□□□ -0.18
ACTB-207ENST00000462494 OR2T10Q8NGZ9 312 aa13.94□□□□□ -0.18
ACTB-207ENST00000462494 NPVFQ9HCQ7 196 aa13.94□□□□□ -0.18
ACTB-207ENST00000462494 KCNIP2Q9NS61 270 aa13.94□□□□□ -0.18
ACTB-207ENST00000462494 IGHV1-46P01743 117 aa13.93□□□□□ -0.18
ACTB-207ENST00000462494 FAM3BP58499 235 aaPredicted RBP13.93□□□□□ -0.18
ACTB-207ENST00000462494 LINC01551Q86U37 167 aa13.93□□□□□ -0.18
ACTB-207ENST00000462494 FAM216BQ8N7L0 139 aa13.93□□□□□ -0.18
ACTB-207ENST00000462494 HIST1H2BLQ99880 126 aa13.93□□□□□ -0.18
ACTB-207ENST00000462494 RAB9BQ9NP90 201 aa13.93□□□□□ -0.18
ACTB-207ENST00000462494 TRGV8A0A0C4DH27 118 aa13.92□□□□□ -0.18
ACTB-207ENST00000462494 SOX15O60248 233 aa13.92□□□□□ -0.18
ACTB-207ENST00000462494 NDUFS6O75380 124 aaKnown RBP13.92□□□□□ -0.18
ACTB-207ENST00000462494 NPY1RP25929 384 aa13.92□□□□□ -0.18
ACTB-207ENST00000462494 THBS3P49746 956 aa13.92□□□□□ -0.18
ACTB-207ENST00000462494 TMPRSS3P57727 454 aa13.92□□□□□ -0.18
ACTB-207ENST00000462494 ARSJQ5FYB0 599 aaPredicted RBP13.92□□□□□ -0.18
ACTB-207ENST00000462494 SLC24A4Q8NFF2 622 aa13.92□□□□□ -0.18
ACTB-207ENST00000462494 XKRY2A2RUG3 117 aa13.92□□□□□ -0.18
ACTB-207ENST00000462494 K7EM74 188 aa13.92□□□□□ -0.18
ACTB-207ENST00000462494 CXorf1O96002 111 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms