RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 KBTBD11O94819 623 aa11.62□□□□□ -0.55
SKA3-204ENST00000462482 DEFA4P12838 97 aa11.62□□□□□ -0.55
SKA3-204ENST00000462482 HIST1H1BP16401 226 aaKnown RBP11.62□□□□□ -0.55
SKA3-204ENST00000462482 ANKRD55Q3KP44 614 aa11.62□□□□□ -0.55
SKA3-204ENST00000462482 OR4A47Q6IF82 309 aa11.62□□□□□ -0.55
SKA3-204ENST00000462482 LINC00322Q6ZN03 302 aaPredicted RBP11.62□□□□□ -0.55
SKA3-204ENST00000462482 GPHB5Q86YW7 130 aa11.62□□□□□ -0.55
SKA3-204ENST00000462482 VKORC1L1Q8N0U8 176 aa11.62□□□□□ -0.55
SKA3-204ENST00000462482 TMEM167AQ8TBQ9 72 aa11.62□□□□□ -0.55
SKA3-204ENST00000462482 NRG4Q8WWG1 115 aa11.62□□□□□ -0.55
SKA3-204ENST00000462482 EEF1AKMT3Q96AZ1 226 aa11.62□□□□□ -0.55
SKA3-204ENST00000462482 CNBD2Q96M20 576 aa11.62□□□□□ -0.55
SKA3-204ENST00000462482 SLC2A9Q9NRM0 540 aa11.62□□□□□ -0.55
SKA3-204ENST00000462482 DNAH7Q8WXX0 4024 aa11.62□□□□□ -0.55
SKA3-204ENST00000462482 NOTOA8MTQ0 251 aa11.61□□□□□ -0.55
SKA3-204ENST00000462482 HLA-AP01891 365 aaKnown RBP11.61□□□□□ -0.55
SKA3-204ENST00000462482 ARPC4P59998 168 aa11.61□□□□□ -0.55
SKA3-204ENST00000462482 RPL30P62888 115 aaKnown RBP11.61□□□□□ -0.55
SKA3-204ENST00000462482 ZNF57Q68EA5 555 aaPredicted RBP11.61□□□□□ -0.55
SKA3-204ENST00000462482 CLEC19AQ6UXS0 136 aa11.61□□□□□ -0.55
SKA3-204ENST00000462482 ZNF66Q6ZN08 573 aa11.61□□□□□ -0.55
SKA3-204ENST00000462482 WDR89Q96FK6 387 aaPredicted RBP11.61□□□□□ -0.55
SKA3-204ENST00000462482 ZC4H2Q9NQZ6 224 aa11.61□□□□□ -0.55
SKA3-204ENST00000462482 TAS2R8Q9NYW2 309 aa11.61□□□□□ -0.55
SKA3-204ENST00000462482 ELF5Q9UKW6 265 aaPredicted RBP11.61□□□□□ -0.55
SKA3-204ENST00000462482 RBMY1BA6NDE4 496 aaKnown RBP11.6□□□□□ -0.55
SKA3-204ENST00000462482 RBMY1EA6NEQ0 496 aaKnown RBP11.6□□□□□ -0.55
SKA3-204ENST00000462482 TMEM235A6NFC5 223 aa11.6□□□□□ -0.55
SKA3-204ENST00000462482 TEX22C9J3V5 150 aa11.6□□□□□ -0.55
SKA3-204ENST00000462482 IGHV3-23P01764 117 aa11.6□□□□□ -0.55
SKA3-204ENST00000462482 RBMY1DP0C7P1 496 aaKnown RBP11.6□□□□□ -0.55
SKA3-204ENST00000462482 CBLN1P23435 193 aa11.6□□□□□ -0.55
SKA3-204ENST00000462482 RPL8P62917 257 aaKnown RBP11.6□□□□□ -0.55
SKA3-204ENST00000462482 SSX9Q7RTT3 188 aa11.6□□□□□ -0.55
SKA3-204ENST00000462482 MFSD4AQ8N468 514 aa11.6□□□□□ -0.55
SKA3-204ENST00000462482 OR52B4Q8NGK2 314 aa11.6□□□□□ -0.55
SKA3-204ENST00000462482 NUDCD2Q8WVJ2 157 aa11.6□□□□□ -0.55
SKA3-204ENST00000462482 CXorf58Q96LI9 332 aa11.6□□□□□ -0.55
SKA3-204ENST00000462482 ANXA10Q9UJ72 324 aa11.6□□□□□ -0.55
SKA3-204ENST00000462482 IGKV1D-13A0A0B4J2D9 117 aa11.59□□□□□ -0.55
SKA3-204ENST00000462482 SMIM30A4D0T7 59 aa11.59□□□□□ -0.55
SKA3-204ENST00000462482 CYB5BO43169 146 aa11.59□□□□□ -0.55
SKA3-204ENST00000462482 NDUFB8O95169 186 aa11.59□□□□□ -0.55
SKA3-204ENST00000462482 IL6RP08887 468 aaPredicted RBP11.59□□□□□ -0.55
SKA3-204ENST00000462482 ZNF735P0CB33 412 aa11.59□□□□□ -0.55
SKA3-204ENST00000462482 IGKV1-13P0DP09 117 aa11.59□□□□□ -0.55
SKA3-204ENST00000462482 PSMB6P28072 239 aa11.59□□□□□ -0.55
SKA3-204ENST00000462482 IZUMO2Q6UXV1 221 aa11.59□□□□□ -0.55
SKA3-204ENST00000462482 TPRA1Q86W33 373 aa11.59□□□□□ -0.55
SKA3-204ENST00000462482 PUSL1Q8N0Z8 303 aaKnown RBP11.59□□□□□ -0.55
SKA3-204ENST00000462482 OR4A5Q8NH83 315 aa11.59□□□□□ -0.55
SKA3-204ENST00000462482 WFDC10AQ9H1F0 79 aa11.59□□□□□ -0.55
SKA3-204ENST00000462482 HRASLSQ9HDD0 168 aa11.59□□□□□ -0.55
SKA3-204ENST00000462482 DAPK2Q9UIK4 370 aa11.59□□□□□ -0.55
SKA3-204ENST00000462482 TRBV7-1A0A0A6YYK4 115 aa11.58□□□□□ -0.56
SKA3-204ENST00000462482 MRPS14O60783 128 aaKnown RBP11.58□□□□□ -0.56
SKA3-204ENST00000462482 CRYGCP07315 174 aa11.58□□□□□ -0.56
SKA3-204ENST00000462482 HLA-GP17693 338 aa11.58□□□□□ -0.56
SKA3-204ENST00000462482 PSMB9P28065 219 aa11.58□□□□□ -0.56
SKA3-204ENST00000462482 CATR1Q13166 79 aa11.58□□□□□ -0.56
SKA3-204ENST00000462482 RBPMS2Q6ZRY4 209 aaKnown RBP11.58□□□□□ -0.56
SKA3-204ENST00000462482 UXS1Q8NBZ7 420 aa11.58□□□□□ -0.56
SKA3-204ENST00000462482 SECTM1Q8WVN6 248 aa11.58□□□□□ -0.56
SKA3-204ENST00000462482 MARC2Q969Z3 335 aa11.58□□□□□ -0.56
SKA3-204ENST00000462482 GGTLC1Q9BX51 225 aa11.58□□□□□ -0.56
SKA3-204ENST00000462482 THYN1Q9P016 225 aa11.58□□□□□ -0.56
SKA3-204ENST00000462482 SSR3Q9UNL2 185 aa11.58□□□□□ -0.56
SKA3-204ENST00000462482 S4R3C0 116 aa11.58□□□□□ -0.56
SKA3-204ENST00000462482 LOC102724200A0A096LPH7 203 aaPredicted RBP11.57□□□□□ -0.56
SKA3-204ENST00000462482 IGLV2-14P01704 120 aa11.57□□□□□ -0.56
SKA3-204ENST00000462482 AREGP15514 252 aa11.57□□□□□ -0.56
SKA3-204ENST00000462482 MSMO1Q15800 293 aa11.57□□□□□ -0.56
SKA3-204ENST00000462482 C19orf35Q6ZS72 473 aa11.57□□□□□ -0.56
SKA3-204ENST00000462482 NR2C2APQ86WQ0 139 aa11.57□□□□□ -0.56
SKA3-204ENST00000462482 SLC38A6Q8IZM9 456 aa11.57□□□□□ -0.56
SKA3-204ENST00000462482 TMEM61Q8N0U2 210 aa11.57□□□□□ -0.56
SKA3-204ENST00000462482 SPAG16Q8N0X2 631 aa11.57□□□□□ -0.56
SKA3-204ENST00000462482 ZBTB34Q8NCN2 500 aa11.57□□□□□ -0.56
SKA3-204ENST00000462482 CACNG8Q8WXS5 425 aa11.57□□□□□ -0.56
SKA3-204ENST00000462482 CCDC140Q96MF4 163 aa11.57□□□□□ -0.56
SKA3-204ENST00000462482 FANCD2OSQ96PS1 177 aa11.57□□□□□ -0.56
SKA3-204ENST00000462482 RRP15Q9Y3B9 282 aaKnown RBP11.57□□□□□ -0.56
SKA3-204ENST00000462482 UFC1Q9Y3C8 167 aa11.57□□□□□ -0.56
SKA3-204ENST00000462482 DMRT1Q9Y5R6 373 aa11.57□□□□□ -0.56
SKA3-204ENST00000462482 TRAV25A0A0B4J276 109 aa11.56□□□□□ -0.56
SKA3-204ENST00000462482 A8MWP6 167 aa11.56□□□□□ -0.56
SKA3-204ENST00000462482 TNFSF12O43508 249 aa11.56□□□□□ -0.56
SKA3-204ENST00000462482 SCAF4O95104 1147 aaKnown RBP11.56□□□□□ -0.56
SKA3-204ENST00000462482 REG1AP05451 166 aa11.56□□□□□ -0.56
SKA3-204ENST00000462482 CLEC3BP05452 202 aa11.56□□□□□ -0.56
SKA3-204ENST00000462482 CTRB1P17538 263 aa11.56□□□□□ -0.56
SKA3-204ENST00000462482 FGF9P31371 208 aaPredicted RBP11.56□□□□□ -0.56
SKA3-204ENST00000462482 FCGR2CP31995 323 aa11.56□□□□□ -0.56
SKA3-204ENST00000462482 GABARAPL2P60520 117 aa11.56□□□□□ -0.56
SKA3-204ENST00000462482 CTRB2Q6GPI1 263 aa11.56□□□□□ -0.56
SKA3-204ENST00000462482 BEST4Q8NFU0 473 aa11.56□□□□□ -0.56
SKA3-204ENST00000462482 LGALS14Q8TCE9 139 aa11.56□□□□□ -0.56
SKA3-204ENST00000462482 FCGR1BQ92637 280 aa11.56□□□□□ -0.56
SKA3-204ENST00000462482 COMMD5Q9GZQ3 224 aa11.56□□□□□ -0.56
SKA3-204ENST00000462482 TXNL4BQ9NX01 149 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms