RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 WDR12Q9GZL7 423 aaKnown RBP9.17□□□□□ -0.94
TRAF3IP1-204ENST00000462122 C5orf66Q9H5L9 145 aa9.17□□□□□ -0.94
TRAF3IP1-204ENST00000462122 BET1LQ9NYM9 111 aa9.17□□□□□ -0.94
TRAF3IP1-204ENST00000462122 GPR132Q9UNW8 380 aa9.17□□□□□ -0.94
TRAF3IP1-204ENST00000462122 MARCH11A6NNE9 402 aa9.16□□□□□ -0.94
TRAF3IP1-204ENST00000462122 CENPXA8MT69 81 aa9.16□□□□□ -0.94
TRAF3IP1-204ENST00000462122 M0QZ24 198 aa9.16□□□□□ -0.94
TRAF3IP1-204ENST00000462122 IGHG4P01861 327 aa9.16□□□□□ -0.94
TRAF3IP1-204ENST00000462122 SERPINE2P07093 398 aa9.16□□□□□ -0.94
TRAF3IP1-204ENST00000462122 ELANEP08246 267 aa9.16□□□□□ -0.94
TRAF3IP1-204ENST00000462122 FGF2P09038 288 aa9.16□□□□□ -0.94
TRAF3IP1-204ENST00000462122 CD40LGP29965 261 aa9.16□□□□□ -0.94
TRAF3IP1-204ENST00000462122 PPIFP30405 207 aaKnown RBP9.16□□□□□ -0.94
TRAF3IP1-204ENST00000462122 MAS1LP35410 378 aa9.16□□□□□ -0.94
TRAF3IP1-204ENST00000462122 LPAR6P43657 344 aa9.16□□□□□ -0.94
TRAF3IP1-204ENST00000462122 CD83Q01151 205 aa9.16□□□□□ -0.94
TRAF3IP1-204ENST00000462122 PJVKQ0ZLH3 352 aa9.16□□□□□ -0.94
TRAF3IP1-204ENST00000462122 TNXAQ16473 311 aa9.16□□□□□ -0.94
TRAF3IP1-204ENST00000462122 ECSCRQ19T08 205 aa9.16□□□□□ -0.94
TRAF3IP1-204ENST00000462122 C2orf68Q2NKX9 166 aa9.16□□□□□ -0.94
TRAF3IP1-204ENST00000462122 ZNF585BQ52M93 769 aa9.16□□□□□ -0.94
TRAF3IP1-204ENST00000462122 AKIRIN2Q53H80 203 aa9.16□□□□□ -0.94
TRAF3IP1-204ENST00000462122 OR4A47Q6IF82 309 aa9.16□□□□□ -0.94
TRAF3IP1-204ENST00000462122 SSX9Q7RTT3 188 aa9.16□□□□□ -0.94
TRAF3IP1-204ENST00000462122 ZNF329Q86UD4 541 aa9.16□□□□□ -0.94
TRAF3IP1-204ENST00000462122 NDUFA11Q86Y39 141 aa9.16□□□□□ -0.94
TRAF3IP1-204ENST00000462122 DMBX1Q8NFW5 382 aa9.16□□□□□ -0.94
TRAF3IP1-204ENST00000462122 GRPEL2Q8TAA5 225 aa9.16□□□□□ -0.94
TRAF3IP1-204ENST00000462122 TMEM68Q96MH6 324 aa9.16□□□□□ -0.94
TRAF3IP1-204ENST00000462122 ZNF430Q9H8G1 570 aaPredicted RBP9.16□□□□□ -0.94
TRAF3IP1-204ENST00000462122 TMEM140Q9NV12 185 aa9.16□□□□□ -0.94
TRAF3IP1-204ENST00000462122 FBXO7Q9Y3I1 522 aa9.16□□□□□ -0.94
TRAF3IP1-204ENST00000462122 TSSC4Q9Y5U2 329 aaPredicted RBP9.16□□□□□ -0.94
TRAF3IP1-204ENST00000462122 TEX13DA0A0J9YY54 714 aaPredicted RBP9.15□□□□□ -0.94
TRAF3IP1-204ENST00000462122 C3orf85A0A1B0GTC6 90 aa9.15□□□□□ -0.94
TRAF3IP1-204ENST00000462122 ARPC1BO15143 372 aaKnown RBP9.15□□□□□ -0.94
TRAF3IP1-204ENST00000462122 ATG12O94817 140 aa9.15□□□□□ -0.94
TRAF3IP1-204ENST00000462122 EGR2P11161 476 aaPredicted RBP9.15□□□□□ -0.94
TRAF3IP1-204ENST00000462122 RPL8P62917 257 aaKnown RBP9.15□□□□□ -0.94
TRAF3IP1-204ENST00000462122 SSBP2P81877 361 aaPredicted RBP9.15□□□□□ -0.94
TRAF3IP1-204ENST00000462122 FOXE3Q13461 319 aa9.15□□□□□ -0.94
TRAF3IP1-204ENST00000462122 ZNF846Q147U1 533 aa9.15□□□□□ -0.94
TRAF3IP1-204ENST00000462122 MRGPRG-AS1Q2M3A8 158 aa9.15□□□□□ -0.94
TRAF3IP1-204ENST00000462122 C10orf99Q6UWK7 81 aa9.15□□□□□ -0.94
TRAF3IP1-204ENST00000462122 RNF152Q8N8N0 203 aa9.15□□□□□ -0.94
TRAF3IP1-204ENST00000462122 MINDY2Q8NBR6 621 aa9.15□□□□□ -0.94
TRAF3IP1-204ENST00000462122 SRSF12Q8WXF0 261 aaKnown RBP9.15□□□□□ -0.94
TRAF3IP1-204ENST00000462122 TSC22D3Q99576 134 aa9.15□□□□□ -0.94
TRAF3IP1-204ENST00000462122 CITED2Q99967 270 aaPredicted RBP9.15□□□□□ -0.94
TRAF3IP1-204ENST00000462122 RTBDNQ9BSG5 229 aaPredicted RBP9.15□□□□□ -0.94
TRAF3IP1-204ENST00000462122 FAM103A1Q9BTL3 118 aaKnown RBP9.15□□□□□ -0.94
TRAF3IP1-204ENST00000462122 NAA60Q9H7X0 242 aa9.15□□□□□ -0.94
TRAF3IP1-204ENST00000462122 VSIG4Q9Y279 399 aa9.15□□□□□ -0.94
TRAF3IP1-204ENST00000462122 NUBP2Q9Y5Y2 271 aa9.15□□□□□ -0.94
TRAF3IP1-204ENST00000462122 WSB1Q9Y6I7 421 aa9.15□□□□□ -0.94
TRAF3IP1-204ENST00000462122 TCRBV4S1A1TA0A5B7 111 aa9.14□□□□□ -0.95
TRAF3IP1-204ENST00000462122 CRYM-AS1A6NIL9 109 aa9.14□□□□□ -0.95
TRAF3IP1-204ENST00000462122 G3V318 75 aa9.14□□□□□ -0.95
TRAF3IP1-204ENST00000462122 KRASP01116 189 aa9.14□□□□□ -0.95
TRAF3IP1-204ENST00000462122 UCP1P25874 307 aa9.14□□□□□ -0.95
TRAF3IP1-204ENST00000462122 RBMS2Q15434 407 aaKnown RBP9.14□□□□□ -0.95
TRAF3IP1-204ENST00000462122 C19orf54Q5BKX5 351 aa9.14□□□□□ -0.95
TRAF3IP1-204ENST00000462122 TCTEX1D4Q5JR98 221 aa9.14□□□□□ -0.95
TRAF3IP1-204ENST00000462122 CXorf66Q5JRM2 361 aaPredicted RBP9.14□□□□□ -0.95
TRAF3IP1-204ENST00000462122 UNQ5815/PRO19632Q6UWF5 114 aa9.14□□□□□ -0.95
TRAF3IP1-204ENST00000462122 SGPP2Q8IWX5 399 aa9.14□□□□□ -0.95
TRAF3IP1-204ENST00000462122 LFNGQ8NES3 379 aa9.14□□□□□ -0.95
TRAF3IP1-204ENST00000462122 OR5M8Q8NGP6 311 aa9.14□□□□□ -0.95
TRAF3IP1-204ENST00000462122 TP53RKQ96S44 253 aa9.14□□□□□ -0.95
TRAF3IP1-204ENST00000462122 PHB2Q99623 299 aa9.14□□□□□ -0.95
TRAF3IP1-204ENST00000462122 SPIN2AQ99865 258 aa9.14□□□□□ -0.95
TRAF3IP1-204ENST00000462122 SPIN2BQ9BPZ2 258 aa9.14□□□□□ -0.95
TRAF3IP1-204ENST00000462122 ZFP57Q9NU63 452 aa9.14□□□□□ -0.95
TRAF3IP1-204ENST00000462122 FOXA2Q9Y261 457 aaPredicted RBP9.14□□□□□ -0.95
TRAF3IP1-204ENST00000462122 A0A1W2PN81 502 aa9.13□□□□□ -0.95
TRAF3IP1-204ENST00000462122 UPK2O00526 184 aa9.13□□□□□ -0.95
TRAF3IP1-204ENST00000462122 IGLV1-40P01703 118 aa9.13□□□□□ -0.95
TRAF3IP1-204ENST00000462122 IL6RP08887 468 aaPredicted RBP9.13□□□□□ -0.95
TRAF3IP1-204ENST00000462122 OR5AC1P0C628 307 aa9.13□□□□□ -0.95
TRAF3IP1-204ENST00000462122 HLA-GP17693 338 aa9.13□□□□□ -0.95
TRAF3IP1-204ENST00000462122 PSMB8P28062 276 aa9.13□□□□□ -0.95
TRAF3IP1-204ENST00000462122 SLC6A1P30531 599 aa9.13□□□□□ -0.95
TRAF3IP1-204ENST00000462122 G6PCP35575 357 aa9.13□□□□□ -0.95
TRAF3IP1-204ENST00000462122 CHRNA7P36544 502 aa9.13□□□□□ -0.95
TRAF3IP1-204ENST00000462122 DHODHQ02127 395 aa9.13□□□□□ -0.95
TRAF3IP1-204ENST00000462122 TRIM16LQ309B1 348 aa9.13□□□□□ -0.95
TRAF3IP1-204ENST00000462122 KHDC1LQ5JSQ8 128 aa9.13□□□□□ -0.95
TRAF3IP1-204ENST00000462122 TMEM65Q6PI78 240 aa9.13□□□□□ -0.95
TRAF3IP1-204ENST00000462122 GALNT14Q96FL9 552 aa9.13□□□□□ -0.95
TRAF3IP1-204ENST00000462122 SEC22AQ96IW7 307 aa9.13□□□□□ -0.95
TRAF3IP1-204ENST00000462122 TMEM222Q9H0R3 208 aa9.13□□□□□ -0.95
TRAF3IP1-204ENST00000462122 KCNIP3Q9Y2W7 256 aa9.13□□□□□ -0.95
TRAF3IP1-204ENST00000462122 CMYA5Q8N3K9 4069 aa9.13□□□□□ -0.95
TRAF3IP1-204ENST00000462122 PIGBOS1A0A0B4J2F0 54 aa9.12□□□□□ -0.95
TRAF3IP1-204ENST00000462122 LINC00854A0A1B0GVQ3 168 aa9.12□□□□□ -0.95
TRAF3IP1-204ENST00000462122 MSGN1A6NI15 193 aa9.12□□□□□ -0.95
TRAF3IP1-204ENST00000462122 H3BUA1 57 aa9.12□□□□□ -0.95
TRAF3IP1-204ENST00000462122 SNAPC5O75971 98 aa9.12□□□□□ -0.95
TRAF3IP1-204ENST00000462122 IGKV1-39P01597 117 aa9.12□□□□□ -0.95
TRAF3IP1-204ENST00000462122 IGKV1D-39P04432 117 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms