RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 G6PCP35575 357 aa10.3□□□□□ -0.76
COL4A6-204ENST00000461897 PDLIM4P50479 330 aa10.3□□□□□ -0.76
COL4A6-204ENST00000461897 SELENOVP59797 346 aa10.3□□□□□ -0.76
COL4A6-204ENST00000461897 ADIRFQ15847 76 aa10.3□□□□□ -0.76
COL4A6-204ENST00000461897 DMRTC2Q8IXT2 367 aaPredicted RBP10.3□□□□□ -0.76
COL4A6-204ENST00000461897 UBALD1Q8TB05 177 aa10.3□□□□□ -0.76
COL4A6-204ENST00000461897 DTD1Q8TEA8 209 aa10.3□□□□□ -0.76
COL4A6-204ENST00000461897 ITLN1Q8WWA0 313 aa10.3□□□□□ -0.76
COL4A6-204ENST00000461897 RNASE6Q93091 150 aaKnown RBP10.3□□□□□ -0.76
COL4A6-204ENST00000461897 COQ2Q96H96 371 aa10.3□□□□□ -0.76
COL4A6-204ENST00000461897 PACRGQ96M98 296 aaPredicted RBP10.3□□□□□ -0.76
COL4A6-204ENST00000461897 PARLQ9H300 379 aa10.3□□□□□ -0.76
COL4A6-204ENST00000461897 CACNA1DQ01668 2161 aa10.29□□□□□ -0.76
COL4A6-204ENST00000461897 FAM90A9PA6NNJ1 464 aa10.29□□□□□ -0.76
COL4A6-204ENST00000461897 C17orf98A8MV24 154 aa10.29□□□□□ -0.76
COL4A6-204ENST00000461897 SRRM5B3KS81 715 aa10.29□□□□□ -0.76
COL4A6-204ENST00000461897 SHISA9B4DS77 424 aa10.29□□□□□ -0.76
COL4A6-204ENST00000461897 IFNL4K9M1U5 179 aa10.29□□□□□ -0.76
COL4A6-204ENST00000461897 GGCTO75223 188 aaKnown RBP10.29□□□□□ -0.76
COL4A6-204ENST00000461897 HRASP01112 189 aa10.29□□□□□ -0.76
COL4A6-204ENST00000461897 KRASP01116 189 aa10.29□□□□□ -0.76
COL4A6-204ENST00000461897 CD55P08174 381 aa10.29□□□□□ -0.76
COL4A6-204ENST00000461897 OR4A8P0C604 315 aa10.29□□□□□ -0.76
COL4A6-204ENST00000461897 FABP4P15090 132 aa10.29□□□□□ -0.76
COL4A6-204ENST00000461897 IL2RGP31785 369 aa10.29□□□□□ -0.76
COL4A6-204ENST00000461897 GPX4P36969 197 aaPredicted RBP10.29□□□□□ -0.76
COL4A6-204ENST00000461897 CFHR2P36980 270 aa10.29□□□□□ -0.76
COL4A6-204ENST00000461897 GATA4P43694 442 aa10.29□□□□□ -0.76
COL4A6-204ENST00000461897 FAM3BP58499 235 aaPredicted RBP10.29□□□□□ -0.76
COL4A6-204ENST00000461897 PKIAP61925 76 aa10.29□□□□□ -0.76
COL4A6-204ENST00000461897 SMIM21Q3B7S5 101 aa10.29□□□□□ -0.76
COL4A6-204ENST00000461897 C9orf152Q5JTZ5 239 aa10.29□□□□□ -0.76
COL4A6-204ENST00000461897 MOGAT3Q86VF5 341 aa10.29□□□□□ -0.76
COL4A6-204ENST00000461897 GCSAMQ8N6F7 178 aa10.29□□□□□ -0.76
COL4A6-204ENST00000461897 Q8N7P7 452 aa10.29□□□□□ -0.76
COL4A6-204ENST00000461897 RAB1CQ92928 201 aa10.29□□□□□ -0.76
COL4A6-204ENST00000461897 ACY3Q96HD9 319 aa10.29□□□□□ -0.76
COL4A6-204ENST00000461897 LURAP1Q96LR2 239 aa10.29□□□□□ -0.76
COL4A6-204ENST00000461897 SLC25A22Q9H936 323 aa10.29□□□□□ -0.76
COL4A6-204ENST00000461897 NGBQ9NPG2 151 aa10.29□□□□□ -0.76
COL4A6-204ENST00000461897 CLN8Q9UBY8 286 aa10.29□□□□□ -0.76
COL4A6-204ENST00000461897 DIDO1Q9BTC0 2240 aaKnown RBP10.28□□□□□ -0.76
COL4A6-204ENST00000461897 H7BYZ3 331 aa10.28□□□□□ -0.76
COL4A6-204ENST00000461897 ZG16O60844 167 aa10.28□□□□□ -0.76
COL4A6-204ENST00000461897 SRP14P37108 136 aaKnown RBP10.28□□□□□ -0.76
COL4A6-204ENST00000461897 KIAA2026Q5HYC2 2103 aa10.28□□□□□ -0.76
COL4A6-204ENST00000461897 FFAR4Q5NUL3 377 aa10.28□□□□□ -0.76
COL4A6-204ENST00000461897 OR52L2PQ8NGH6 319 aa10.28□□□□□ -0.76
COL4A6-204ENST00000461897 TMEM170AQ8WVE7 144 aa10.28□□□□□ -0.76
COL4A6-204ENST00000461897 RAB24Q969Q5 203 aa10.28□□□□□ -0.76
COL4A6-204ENST00000461897 NEIL1Q96FI4 390 aaPredicted RBP10.28□□□□□ -0.76
COL4A6-204ENST00000461897 SNX22Q96L94 193 aa10.28□□□□□ -0.76
COL4A6-204ENST00000461897 HSD17B10Q99714 261 aaKnown RBP10.28□□□□□ -0.76
COL4A6-204ENST00000461897 METRNQ9UJH8 293 aa10.28□□□□□ -0.76
COL4A6-204ENST00000461897 ACACBO00763 2458 aa10.28□□□□□ -0.76
COL4A6-204ENST00000461897 ROS1P08922 2347 aa10.28□□□□□ -0.76
COL4A6-204ENST00000461897 C17orf112F2Z3M2 114 aa10.27□□□□□ -0.76
COL4A6-204ENST00000461897 CD99P14209 185 aa10.27□□□□□ -0.76
COL4A6-204ENST00000461897 GALR1P47211 349 aa10.27□□□□□ -0.76
COL4A6-204ENST00000461897 HTD2P86397 168 aa10.27□□□□□ -0.76
COL4A6-204ENST00000461897 DEFA6Q01524 100 aa10.27□□□□□ -0.76
COL4A6-204ENST00000461897 ZNF816Q0VGE8 651 aaPredicted RBP10.27□□□□□ -0.76
COL4A6-204ENST00000461897 GAMTQ14353 236 aa10.27□□□□□ -0.76
COL4A6-204ENST00000461897 JOSD1Q15040 202 aaPredicted RBP10.27□□□□□ -0.76
COL4A6-204ENST00000461897 TRAT1Q6PIZ9 186 aa10.27□□□□□ -0.76
COL4A6-204ENST00000461897 OR1P1Q8NH06 330 aa10.27□□□□□ -0.76
COL4A6-204ENST00000461897 LINC01560Q8TB33 94 aa10.27□□□□□ -0.76
COL4A6-204ENST00000461897 NINJ1Q92982 152 aa10.27□□□□□ -0.76
COL4A6-204ENST00000461897 RPUSD4Q96CM3 377 aaKnown RBP10.27□□□□□ -0.76
COL4A6-204ENST00000461897 PLPPR2Q96GM1 343 aa10.27□□□□□ -0.76
COL4A6-204ENST00000461897 OR5B12Q96R08 314 aa10.27□□□□□ -0.76
COL4A6-204ENST00000461897 IL19Q9UHD0 177 aa10.27□□□□□ -0.76
COL4A6-204ENST00000461897 IGKV1D-17A0A075B6S4 117 aa10.27□□□□□ -0.77
COL4A6-204ENST00000461897 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.27□□□□□ -0.77
COL4A6-204ENST00000461897 TMPRSS2O15393 492 aa10.27□□□□□ -0.77
COL4A6-204ENST00000461897 LHBP01229 141 aa10.27□□□□□ -0.77
COL4A6-204ENST00000461897 GZMHP20718 246 aa10.27□□□□□ -0.77
COL4A6-204ENST00000461897 TNFAIP6P98066 277 aaPredicted RBP10.27□□□□□ -0.77
COL4A6-204ENST00000461897 COL10A1Q03692 680 aa10.27□□□□□ -0.77
COL4A6-204ENST00000461897 TFF3Q07654 80 aa10.27□□□□□ -0.77
COL4A6-204ENST00000461897 ACOT6Q3I5F7 207 aaPredicted RBP10.27□□□□□ -0.77
COL4A6-204ENST00000461897 C4orf17Q53FE4 359 aa10.27□□□□□ -0.77
COL4A6-204ENST00000461897 PDLIM3Q53GG5 364 aaPredicted RBP10.27□□□□□ -0.77
COL4A6-204ENST00000461897 H2BFWTQ7Z2G1 175 aa10.27□□□□□ -0.77
COL4A6-204ENST00000461897 CD177Q8N6Q3 437 aa10.27□□□□□ -0.77
COL4A6-204ENST00000461897 NEUROG1Q92886 237 aa10.27□□□□□ -0.77
COL4A6-204ENST00000461897 GCM1Q9NP62 436 aa10.27□□□□□ -0.77
COL4A6-204ENST00000461897 WDR83OSQ9Y284 106 aa10.27□□□□□ -0.77
COL4A6-204ENST00000461897 USF3Q68DE3 2245 aa10.27□□□□□ -0.77
COL4A6-204ENST00000461897 C15orf62A8K5M9 175 aa10.26□□□□□ -0.77
COL4A6-204ENST00000461897 PPP5D1E7EU14 171 aa10.26□□□□□ -0.77
COL4A6-204ENST00000461897 SIAH2O43255 324 aa10.26□□□□□ -0.77
COL4A6-204ENST00000461897 AMBPP02760 352 aa10.26□□□□□ -0.77
COL4A6-204ENST00000461897 LCN2P80188 198 aa10.26□□□□□ -0.77
COL4A6-204ENST00000461897 PDZD11Q5EBL8 140 aa10.26□□□□□ -0.77
COL4A6-204ENST00000461897 ACTL10Q5JWF8 245 aa10.26□□□□□ -0.77
COL4A6-204ENST00000461897 REC114Q7Z4M0 266 aa10.26□□□□□ -0.77
COL4A6-204ENST00000461897 ZNF808Q8N4W9 903 aaPredicted RBP10.26□□□□□ -0.77
COL4A6-204ENST00000461897 ZNF709Q8N972 641 aa10.26□□□□□ -0.77
COL4A6-204ENST00000461897 OR4F5Q8NH21 305 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms