RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 C15orf40Q8WUR7 153 aa11.91□□□□□ -0.5
VARS-219ENST00000461328 BCL7BQ9BQE9 202 aa11.91□□□□□ -0.5
VARS-219ENST00000461328 AIFM2Q9BRQ8 373 aa11.91□□□□□ -0.5
VARS-219ENST00000461328 HRASLSQ9HDD0 168 aa11.91□□□□□ -0.5
VARS-219ENST00000461328 IGHV4OR15-8A0A075B7B6 117 aa11.9□□□□□ -0.5
VARS-219ENST00000461328 A0A087WW49 117 aa11.9□□□□□ -0.5
VARS-219ENST00000461328 RBFOX2O43251 390 aaKnown RBP eCLIP11.9□□□□□ -0.5
VARS-219ENST00000461328 OR9G9P0C7N8 305 aa11.9□□□□□ -0.5
VARS-219ENST00000461328 S100GP29377 79 aa11.9□□□□□ -0.5
VARS-219ENST00000461328 GNRHRP30968 328 aa11.9□□□□□ -0.5
VARS-219ENST00000461328 RPL27AP46776 148 aaKnown RBP11.9□□□□□ -0.5
VARS-219ENST00000461328 SLURP1P55000 103 aa11.9□□□□□ -0.5
VARS-219ENST00000461328 BRWD1-AS2P59051 145 aa11.9□□□□□ -0.5
VARS-219ENST00000461328 ERVK-16P61578 105 aa11.9□□□□□ -0.5
VARS-219ENST00000461328 DEFA5Q01523 94 aa11.9□□□□□ -0.5
VARS-219ENST00000461328 ASPHD1Q5U4P2 390 aa11.9□□□□□ -0.5
VARS-219ENST00000461328 LYSMD2Q8IV50 215 aa11.9□□□□□ -0.5
VARS-219ENST00000461328 LAX1Q8IWV1 398 aa11.9□□□□□ -0.5
VARS-219ENST00000461328 DNAH3Q8TD57 4116 aa11.9□□□□□ -0.5
VARS-219ENST00000461328 CD300LFQ8TDQ1 290 aa11.9□□□□□ -0.5
VARS-219ENST00000461328 FYTTD1Q96QD9 318 aaKnown RBP11.9□□□□□ -0.5
VARS-219ENST00000461328 CCDC59Q9P031 241 aaKnown RBP11.9□□□□□ -0.5
VARS-219ENST00000461328 SCOCQ9UIL1 159 aa11.9□□□□□ -0.5
VARS-219ENST00000461328 DPPA5A6NC42 116 aa11.89□□□□□ -0.51
VARS-219ENST00000461328 M0QYG6 137 aa11.89□□□□□ -0.51
VARS-219ENST00000461328 GPR31O00270 319 aa11.89□□□□□ -0.51
VARS-219ENST00000461328 HPRT1P00492 218 aa11.89□□□□□ -0.51
VARS-219ENST00000461328 IFNA6P05013 189 aa11.89□□□□□ -0.51
VARS-219ENST00000461328 NQO2P16083 231 aa11.89□□□□□ -0.51
VARS-219ENST00000461328 TAS2R31P59538 309 aa11.89□□□□□ -0.51
VARS-219ENST00000461328 RPL8P62917 257 aaKnown RBP11.89□□□□□ -0.51
VARS-219ENST00000461328 DCTN2Q13561 401 aaKnown RBP11.89□□□□□ -0.51
VARS-219ENST00000461328 PHLDA2Q53GA4 152 aa11.89□□□□□ -0.51
VARS-219ENST00000461328 RNASE10Q5GAN6 216 aaKnown RBP11.89□□□□□ -0.51
VARS-219ENST00000461328 OR4A47Q6IF82 309 aa11.89□□□□□ -0.51
VARS-219ENST00000461328 PUSL1Q8N0Z8 303 aaKnown RBP11.89□□□□□ -0.51
VARS-219ENST00000461328 DMBX1Q8NFW5 382 aa11.89□□□□□ -0.51
VARS-219ENST00000461328 OR52I2Q8NH67 350 aa11.89□□□□□ -0.51
VARS-219ENST00000461328 TMEM167AQ8TBQ9 72 aa11.89□□□□□ -0.51
VARS-219ENST00000461328 TINAGL1Q9GZM7 467 aaPredicted RBP11.89□□□□□ -0.51
VARS-219ENST00000461328 ANKRD34BA5PLL1 514 aa11.88□□□□□ -0.51
VARS-219ENST00000461328 CCDC160A6NGH7 325 aa11.88□□□□□ -0.51
VARS-219ENST00000461328 OVOL1O14753 267 aa11.88□□□□□ -0.51
VARS-219ENST00000461328 S1PR2O95136 353 aa11.88□□□□□ -0.51
VARS-219ENST00000461328 HSPB1P04792 205 aaKnown RBP11.88□□□□□ -0.51
VARS-219ENST00000461328 MAS1LP35410 378 aa11.88□□□□□ -0.51
VARS-219ENST00000461328 ECI1P42126 302 aa11.88□□□□□ -0.51
VARS-219ENST00000461328 LPCAT3Q6P1A2 487 aa11.88□□□□□ -0.51
VARS-219ENST00000461328 SLC25A42Q86VD7 318 aa11.88□□□□□ -0.51
VARS-219ENST00000461328 ADAD2Q8NCV1 583 aaKnown RBP11.88□□□□□ -0.51
VARS-219ENST00000461328 OR4A5Q8NH83 315 aa11.88□□□□□ -0.51
VARS-219ENST00000461328 FCAMRQ8WWV6 532 aa11.88□□□□□ -0.51
VARS-219ENST00000461328 DCUN1D4Q92564 292 aa11.88□□□□□ -0.51
VARS-219ENST00000461328 ISOC1Q96CN7 298 aa11.88□□□□□ -0.51
VARS-219ENST00000461328 C6orf62Q9GZU0 229 aaPredicted RBP11.88□□□□□ -0.51
VARS-219ENST00000461328 MIXL1Q9H2W2 232 aa11.88□□□□□ -0.51
VARS-219ENST00000461328 COMMD9Q9P000 198 aa11.88□□□□□ -0.51
VARS-219ENST00000461328 HMX3A6NHT5 357 aa11.87□□□□□ -0.51
VARS-219ENST00000461328 H3BMQ9 156 aa11.87□□□□□ -0.51
VARS-219ENST00000461328 CTDSP2O14595 271 aa11.87□□□□□ -0.51
VARS-219ENST00000461328 PGLYRP1O75594 196 aaPredicted RBP11.87□□□□□ -0.51
VARS-219ENST00000461328 TPPPO94811 219 aa11.87□□□□□ -0.51
VARS-219ENST00000461328 PRH1P02810 166 aa11.87□□□□□ -0.51
VARS-219ENST00000461328 PGAM2P15259 253 aa11.87□□□□□ -0.51
VARS-219ENST00000461328 RPA2P15927 270 aa11.87□□□□□ -0.51
VARS-219ENST00000461328 HLA-GP17693 338 aa11.87□□□□□ -0.51
VARS-219ENST00000461328 CD69Q07108 199 aa11.87□□□□□ -0.51
VARS-219ENST00000461328 VAX1Q5SQQ9 334 aa11.87□□□□□ -0.51
VARS-219ENST00000461328 DYNC2LI1Q8TCX1 351 aa11.87□□□□□ -0.51
VARS-219ENST00000461328 DLX4Q92988 240 aaPredicted RBP11.87□□□□□ -0.51
VARS-219ENST00000461328 USMG5Q96IX5 58 aa11.87□□□□□ -0.51
VARS-219ENST00000461328 ABHD1Q96SE0 405 aa11.87□□□□□ -0.51
VARS-219ENST00000461328 PLEKHA2Q9HB19 425 aa11.87□□□□□ -0.51
VARS-219ENST00000461328 TMEM140Q9NV12 185 aa11.87□□□□□ -0.51
VARS-219ENST00000461328 BET1LQ9NYM9 111 aa11.87□□□□□ -0.51
VARS-219ENST00000461328 KLK11Q9UBX7 282 aa11.87□□□□□ -0.51
VARS-219ENST00000461328 SAP30O75446 220 aa11.86□□□□□ -0.51
VARS-219ENST00000461328 CD3DP04234 171 aa11.86□□□□□ -0.51
VARS-219ENST00000461328 TBPP20226 339 aa11.86□□□□□ -0.51
VARS-219ENST00000461328 ZP3P21754 424 aa11.86□□□□□ -0.51
VARS-219ENST00000461328 F2RP25116 425 aa11.86□□□□□ -0.51
VARS-219ENST00000461328 INSL3P51460 131 aa11.86□□□□□ -0.51
VARS-219ENST00000461328 RHOGP84095 191 aa11.86□□□□□ -0.51
VARS-219ENST00000461328 IL18Q14116 193 aa11.86□□□□□ -0.51
VARS-219ENST00000461328 SLC38A6Q8IZM9 456 aa11.86□□□□□ -0.51
VARS-219ENST00000461328 DGCR14Q96DF8 476 aaKnown RBP11.86□□□□□ -0.51
VARS-219ENST00000461328 DIRAS2Q96HU8 199 aa11.86□□□□□ -0.51
VARS-219ENST00000461328 PRR25Q96S07 402 aa11.86□□□□□ -0.51
VARS-219ENST00000461328 RANGRFQ9HD47 186 aaPredicted RBP11.86□□□□□ -0.51
VARS-219ENST00000461328 MTFP1Q9UDX5 166 aa11.86□□□□□ -0.51
VARS-219ENST00000461328 FAM223BA6NKX1 122 aa11.85□□□□□ -0.51
VARS-219ENST00000461328 TEX22C9J3V5 150 aa11.85□□□□□ -0.51
VARS-219ENST00000461328 GABARAPH6UMI1 98 aa11.85□□□□□ -0.51
VARS-219ENST00000461328 MYOD1P15172 320 aa11.85□□□□□ -0.51
VARS-219ENST00000461328 LPAR6P43657 344 aa11.85□□□□□ -0.51
VARS-219ENST00000461328 TAS2R19P59542 299 aa11.85□□□□□ -0.51
VARS-219ENST00000461328 MRPS10P82664 201 aaKnown RBP11.85□□□□□ -0.51
VARS-219ENST00000461328 FAM223AQ8IWN6 122 aa11.85□□□□□ -0.51
VARS-219ENST00000461328 TTC9CQ8N5M4 171 aa11.85□□□□□ -0.51
VARS-219ENST00000461328 B9D2Q9BPU9 175 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms