RNA–Protein interactions for RNA: ENST00000460431.1

SMARCD3-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-204ENST00000460431 OR1N2Q8NGR9 330 aa12.75□□□□□ -0.37
SMARCD3-204ENST00000460431 DIRAS2Q96HU8 199 aa12.75□□□□□ -0.37
SMARCD3-204ENST00000460431 OR5B12Q96R08 314 aa12.75□□□□□ -0.37
SMARCD3-204ENST00000460431 MCRIP2Q9BUT9 160 aaKnown RBP12.75□□□□□ -0.37
SMARCD3-204ENST00000460431 NXF2Q9GZY0 626 aaKnown RBP12.75□□□□□ -0.37
SMARCD3-204ENST00000460431 PLEKHA2Q9HB19 425 aa12.75□□□□□ -0.37
SMARCD3-204ENST00000460431 M0QYG6 137 aa12.74□□□□□ -0.37
SMARCD3-204ENST00000460431 TRGV3P03979 118 aa12.74□□□□□ -0.37
SMARCD3-204ENST00000460431 CD3DP04234 171 aa12.74□□□□□ -0.37
SMARCD3-204ENST00000460431 LGALS1P09382 135 aaKnown RBP12.74□□□□□ -0.37
SMARCD3-204ENST00000460431 TBPP20226 339 aa12.74□□□□□ -0.37
SMARCD3-204ENST00000460431 MAS1LP35410 378 aa12.74□□□□□ -0.37
SMARCD3-204ENST00000460431 TPPP2P59282 170 aa12.74□□□□□ -0.37
SMARCD3-204ENST00000460431 TAS2R31P59538 309 aa12.74□□□□□ -0.37
SMARCD3-204ENST00000460431 DGCR2P98153 550 aa12.74□□□□□ -0.37
SMARCD3-204ENST00000460431 ZNF616Q08AN1 781 aa12.74□□□□□ -0.37
SMARCD3-204ENST00000460431 SSX9Q7RTT3 188 aa12.74□□□□□ -0.37
SMARCD3-204ENST00000460431 PHB2Q99623 299 aa12.74□□□□□ -0.37
SMARCD3-204ENST00000460431 SPIN2AQ99865 258 aa12.74□□□□□ -0.37
SMARCD3-204ENST00000460431 SPIN2BQ9BPZ2 258 aa12.74□□□□□ -0.37
SMARCD3-204ENST00000460431 RSRP1Q9BUV0 290 aa12.74□□□□□ -0.37
SMARCD3-204ENST00000460431 TINAGL1Q9GZM7 467 aaPredicted RBP12.74□□□□□ -0.37
SMARCD3-204ENST00000460431 ZNF355PQ9NSJ1 428 aa12.74□□□□□ -0.37
SMARCD3-204ENST00000460431 BET1LQ9NYM9 111 aa12.74□□□□□ -0.37
SMARCD3-204ENST00000460431 RABL2AQ9UBK7 228 aaPredicted RBP12.74□□□□□ -0.37
SMARCD3-204ENST00000460431 RABL2BQ9UNT1 228 aa12.74□□□□□ -0.37
SMARCD3-204ENST00000460431 CTDSPLO15194 276 aa12.73□□□□□ -0.37
SMARCD3-204ENST00000460431 RLN1P04808 185 aa12.73□□□□□ -0.37
SMARCD3-204ENST00000460431 IFNA6P05013 189 aa12.73□□□□□ -0.37
SMARCD3-204ENST00000460431 IL6RP08887 468 aaPredicted RBP12.73□□□□□ -0.37
SMARCD3-204ENST00000460431 OR9G9P0C7N8 305 aa12.73□□□□□ -0.37
SMARCD3-204ENST00000460431 APELAP0DMC3 54 aa12.73□□□□□ -0.37
SMARCD3-204ENST00000460431 NQO2P16083 231 aa12.73□□□□□ -0.37
SMARCD3-204ENST00000460431 F2RP25116 425 aa12.73□□□□□ -0.37
SMARCD3-204ENST00000460431 RAB25P57735 213 aa12.73□□□□□ -0.37
SMARCD3-204ENST00000460431 SSBP1Q04837 148 aaKnown RBP12.73□□□□□ -0.37
SMARCD3-204ENST00000460431 RNASE10Q5GAN6 216 aaKnown RBP12.73□□□□□ -0.37
SMARCD3-204ENST00000460431 C10orf55Q5SWW7 151 aa12.73□□□□□ -0.37
SMARCD3-204ENST00000460431 OR4A47Q6IF82 309 aa12.73□□□□□ -0.37
SMARCD3-204ENST00000460431 TMEM229BQ8NBD8 167 aa12.73□□□□□ -0.37
SMARCD3-204ENST00000460431 ADAD2Q8NCV1 583 aaKnown RBP12.73□□□□□ -0.37
SMARCD3-204ENST00000460431 OR4A5Q8NH83 315 aa12.73□□□□□ -0.37
SMARCD3-204ENST00000460431 DGCR14Q96DF8 476 aaKnown RBP12.73□□□□□ -0.37
SMARCD3-204ENST00000460431 GPR61Q9BZJ8 451 aa12.73□□□□□ -0.37
SMARCD3-204ENST00000460431 C6orf62Q9GZU0 229 aaPredicted RBP12.73□□□□□ -0.37
SMARCD3-204ENST00000460431 RBM38Q9H0Z9 239 aaKnown RBP12.73□□□□□ -0.37
SMARCD3-204ENST00000460431 ALX4Q9H161 411 aaPredicted RBP12.73□□□□□ -0.37
SMARCD3-204ENST00000460431 A0A0G2JLM5 398 aa12.72□□□□□ -0.37
SMARCD3-204ENST00000460431 IGHV3-11P01762 117 aa12.72□□□□□ -0.37
SMARCD3-204ENST00000460431 CD74P04233 296 aa12.72□□□□□ -0.37
SMARCD3-204ENST00000460431 OR8U8P0C7N1 319 aa12.72□□□□□ -0.37
SMARCD3-204ENST00000460431 TAS2R19P59542 299 aa12.72□□□□□ -0.37
SMARCD3-204ENST00000460431 RPL8P62917 257 aaKnown RBP12.72□□□□□ -0.37
SMARCD3-204ENST00000460431 LHFPL1Q86WI0 220 aa12.72□□□□□ -0.37
SMARCD3-204ENST00000460431 SLC38A6Q8IZM9 456 aa12.72□□□□□ -0.37
SMARCD3-204ENST00000460431 ARRDC1Q8N5I2 433 aa12.72□□□□□ -0.37
SMARCD3-204ENST00000460431 TTC9CQ8N5M4 171 aa12.72□□□□□ -0.37
SMARCD3-204ENST00000460431 MCFD2Q8NI22 146 aa12.72□□□□□ -0.37
SMARCD3-204ENST00000460431 SMIM4Q8WVI0 70 aa12.72□□□□□ -0.37
SMARCD3-204ENST00000460431 DPF1Q92782 380 aa12.72□□□□□ -0.37
SMARCD3-204ENST00000460431 SOSTQ9BQB4 213 aa12.72□□□□□ -0.37
SMARCD3-204ENST00000460431 COA4Q9NYJ1 87 aa12.72□□□□□ -0.37
SMARCD3-204ENST00000460431 COMMD9Q9P000 198 aa12.72□□□□□ -0.37
SMARCD3-204ENST00000460431 CCDC160A6NGH7 325 aa12.71□□□□□ -0.37
SMARCD3-204ENST00000460431 TEX22C9J3V5 150 aa12.71□□□□□ -0.37
SMARCD3-204ENST00000460431 E7EUB6 86 aa12.71□□□□□ -0.37
SMARCD3-204ENST00000460431 MPPED1O15442 326 aa12.71□□□□□ -0.37
SMARCD3-204ENST00000460431 S1PR2O95136 353 aa12.71□□□□□ -0.37
SMARCD3-204ENST00000460431 HSPB1P04792 205 aaKnown RBP12.71□□□□□ -0.37
SMARCD3-204ENST00000460431 ZNF735P0CB33 412 aa12.71□□□□□ -0.37
SMARCD3-204ENST00000460431 S100GP29377 79 aa12.71□□□□□ -0.37
SMARCD3-204ENST00000460431 TNFSF8P32971 234 aa12.71□□□□□ -0.37
SMARCD3-204ENST00000460431 LPAR6P43657 344 aa12.71□□□□□ -0.37
SMARCD3-204ENST00000460431 RPL27AP46776 148 aaKnown RBP12.71□□□□□ -0.37
SMARCD3-204ENST00000460431 EGFEM1PQ0D2K5 195 aa12.71□□□□□ -0.37
SMARCD3-204ENST00000460431 IL18Q14116 193 aa12.71□□□□□ -0.37
SMARCD3-204ENST00000460431 ZNF585BQ52M93 769 aa12.71□□□□□ -0.37
SMARCD3-204ENST00000460431 PHLDA2Q53GA4 152 aa12.71□□□□□ -0.37
SMARCD3-204ENST00000460431 HRASLSQ9HDD0 168 aa12.71□□□□□ -0.37
SMARCD3-204ENST00000460431 FAM212BQ9NTI7 297 aaPredicted RBP12.71□□□□□ -0.37
SMARCD3-204ENST00000460431 SORL1Q92673 2214 aa12.7□□□□□ -0.38
SMARCD3-204ENST00000460431 C13orf42A0A1B0GVH6 325 aa12.7□□□□□ -0.38
SMARCD3-204ENST00000460431 A0A1B0GW64 132 aa12.7□□□□□ -0.38
SMARCD3-204ENST00000460431 LINC01619G3V211 115 aa12.7□□□□□ -0.38
SMARCD3-204ENST00000460431 ZNF701M0R085 212 aaPredicted RBP12.7□□□□□ -0.38
SMARCD3-204ENST00000460431 UPK2O00526 184 aa12.7□□□□□ -0.38
SMARCD3-204ENST00000460431 RAB3DO95716 219 aa12.7□□□□□ -0.38
SMARCD3-204ENST00000460431 FGF2P09038 288 aa12.7□□□□□ -0.38
SMARCD3-204ENST00000460431 HLA-GP17693 338 aa12.7□□□□□ -0.38
SMARCD3-204ENST00000460431 STEAP1BQ6NZ63 245 aa12.7□□□□□ -0.38
SMARCD3-204ENST00000460431 CADM3Q8N126 398 aa12.7□□□□□ -0.38
SMARCD3-204ENST00000460431 DMBX1Q8NFW5 382 aa12.7□□□□□ -0.38
SMARCD3-204ENST00000460431 OR4D10Q8NGI6 311 aa12.7□□□□□ -0.38
SMARCD3-204ENST00000460431 TERB2Q8NHR7 220 aa12.7□□□□□ -0.38
SMARCD3-204ENST00000460431 USMG5Q96IX5 58 aa12.7□□□□□ -0.38
SMARCD3-204ENST00000460431 SLC2A9Q9NRM0 540 aa12.7□□□□□ -0.38
SMARCD3-204ENST00000460431 TMEM140Q9NV12 185 aa12.7□□□□□ -0.38
SMARCD3-204ENST00000460431 AURKAIP1Q9NWT8 199 aaPredicted RBP12.7□□□□□ -0.38
SMARCD3-204ENST00000460431 RSL24D1Q9UHA3 163 aaKnown RBP12.7□□□□□ -0.38
SMARCD3-204ENST00000460431 IGHV4OR15-8A0A075B7B6 117 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms