RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 CCR6P51684 374 aa10.06□□□□□ -0.8
COL18A1-206ENST00000459895 FXYD3Q14802 87 aa10.06□□□□□ -0.8
COL18A1-206ENST00000459895 POU2AF1Q16633 256 aa10.06□□□□□ -0.8
COL18A1-206ENST00000459895 KHDC1LQ5JSQ8 128 aa10.06□□□□□ -0.8
COL18A1-206ENST00000459895 LCNL1Q6ZST4 164 aa10.06□□□□□ -0.8
COL18A1-206ENST00000459895 CENPVQ7Z7K6 275 aaPredicted RBP10.06□□□□□ -0.8
COL18A1-206ENST00000459895 ADAD2Q8NCV1 583 aaKnown RBP10.06□□□□□ -0.8
COL18A1-206ENST00000459895 TMEM167AQ8TBQ9 72 aa10.06□□□□□ -0.8
COL18A1-206ENST00000459895 S100ZQ8WXG8 99 aa10.06□□□□□ -0.8
COL18A1-206ENST00000459895 OR2A7Q96R45 310 aa10.06□□□□□ -0.8
COL18A1-206ENST00000459895 CCDC32Q9BV29 185 aa10.06□□□□□ -0.8
COL18A1-206ENST00000459895 BET1LQ9NYM9 111 aa10.06□□□□□ -0.8
COL18A1-206ENST00000459895 GPR132Q9UNW8 380 aa10.06□□□□□ -0.8
COL18A1-206ENST00000459895 WSB1Q9Y6I7 421 aa10.06□□□□□ -0.8
COL18A1-206ENST00000459895 CMYA5Q8N3K9 4069 aa10.06□□□□□ -0.8
COL18A1-206ENST00000459895 PLXNB1O43157 2135 aa10.06□□□□□ -0.8
COL18A1-206ENST00000459895 TRAV3A0A0B4J244 114 aa10.05□□□□□ -0.8
COL18A1-206ENST00000459895 C3orf85A0A1B0GTC6 90 aa10.05□□□□□ -0.8
COL18A1-206ENST00000459895 A0A1W2PRX2 142 aa10.05□□□□□ -0.8
COL18A1-206ENST00000459895 CRYM-AS1A6NIL9 109 aa10.05□□□□□ -0.8
COL18A1-206ENST00000459895 SOX15O60248 233 aa10.05□□□□□ -0.8
COL18A1-206ENST00000459895 CREBL2O60519 120 aaPredicted RBP10.05□□□□□ -0.8
COL18A1-206ENST00000459895 APELAP0DMC3 54 aa10.05□□□□□ -0.8
COL18A1-206ENST00000459895 G6PCP35575 357 aa10.05□□□□□ -0.8
COL18A1-206ENST00000459895 SLC35B1P78383 322 aa10.05□□□□□ -0.8
COL18A1-206ENST00000459895 ASPHD1Q5U4P2 390 aa10.05□□□□□ -0.8
COL18A1-206ENST00000459895 ZNF562Q6V9R5 426 aa10.05□□□□□ -0.8
COL18A1-206ENST00000459895 MMD2Q8IY49 270 aa10.05□□□□□ -0.8
COL18A1-206ENST00000459895 TCTEX1D1Q8N7M0 179 aa10.05□□□□□ -0.8
COL18A1-206ENST00000459895 DMBX1Q8NFW5 382 aa10.05□□□□□ -0.8
COL18A1-206ENST00000459895 SGMS2Q8NHU3 365 aa10.05□□□□□ -0.8
COL18A1-206ENST00000459895 VSTM2AQ8TAG5 236 aa10.05□□□□□ -0.8
COL18A1-206ENST00000459895 SRSF12Q8WXF0 261 aaKnown RBP10.05□□□□□ -0.8
COL18A1-206ENST00000459895 WDR12Q9GZL7 423 aaKnown RBP10.05□□□□□ -0.8
COL18A1-206ENST00000459895 NAA60Q9H7X0 242 aa10.05□□□□□ -0.8
COL18A1-206ENST00000459895 FAM212BQ9NTI7 297 aaPredicted RBP10.05□□□□□ -0.8
COL18A1-206ENST00000459895 TRRAPQ9Y4A5 3859 aa10.04□□□□□ -0.8
COL18A1-206ENST00000459895 A0A1B0GW64 132 aa10.04□□□□□ -0.8
COL18A1-206ENST00000459895 A0A1W2PN81 502 aa10.04□□□□□ -0.8
COL18A1-206ENST00000459895 CNIH1O95406 144 aa10.04□□□□□ -0.8
COL18A1-206ENST00000459895 IGHG4P01861 327 aa10.04□□□□□ -0.8
COL18A1-206ENST00000459895 OR5AC1P0C628 307 aa10.04□□□□□ -0.8
COL18A1-206ENST00000459895 UCP1P25874 307 aa10.04□□□□□ -0.8
COL18A1-206ENST00000459895 PPIFP30405 207 aaKnown RBP10.04□□□□□ -0.8
COL18A1-206ENST00000459895 CHRNA7P36544 502 aa10.04□□□□□ -0.8
COL18A1-206ENST00000459895 OR2B8PP59922 312 aa10.04□□□□□ -0.8
COL18A1-206ENST00000459895 ERVK-16P61578 105 aa10.04□□□□□ -0.8
COL18A1-206ENST00000459895 SP6Q3SY56 376 aa10.04□□□□□ -0.8
COL18A1-206ENST00000459895 UNQ5815/PRO19632Q6UWF5 114 aa10.04□□□□□ -0.8
COL18A1-206ENST00000459895 TMED4Q7Z7H5 227 aa10.04□□□□□ -0.8
COL18A1-206ENST00000459895 LHFPL5Q8TAF8 219 aa10.04□□□□□ -0.8
COL18A1-206ENST00000459895 CASTOR1Q8WTX7 329 aa10.04□□□□□ -0.8
COL18A1-206ENST00000459895 PRR13Q9NZ81 148 aa10.04□□□□□ -0.8
COL18A1-206ENST00000459895 FOXA2Q9Y261 457 aaPredicted RBP10.04□□□□□ -0.8
COL18A1-206ENST00000459895 VWFP04275 2813 aa10.03□□□□□ -0.8
COL18A1-206ENST00000459895 TEX22C9J3V5 150 aa10.03□□□□□ -0.8
COL18A1-206ENST00000459895 KRASP01116 189 aa10.03□□□□□ -0.8
COL18A1-206ENST00000459895 IGKV1-5P01602 117 aa10.03□□□□□ -0.8
COL18A1-206ENST00000459895 RPLP1P05386 114 aaKnown RBP10.03□□□□□ -0.8
COL18A1-206ENST00000459895 OR9G9P0C7N8 305 aa10.03□□□□□ -0.8
COL18A1-206ENST00000459895 HLA-GP17693 338 aa10.03□□□□□ -0.8
COL18A1-206ENST00000459895 PSMB8P28062 276 aa10.03□□□□□ -0.8
COL18A1-206ENST00000459895 RPL8P62917 257 aaKnown RBP10.03□□□□□ -0.8
COL18A1-206ENST00000459895 SUPT4H1P63272 117 aaKnown RBP10.03□□□□□ -0.8
COL18A1-206ENST00000459895 CD83Q01151 205 aa10.03□□□□□ -0.8
COL18A1-206ENST00000459895 DEFA5Q01523 94 aa10.03□□□□□ -0.8
COL18A1-206ENST00000459895 FOXE3Q13461 319 aa10.03□□□□□ -0.8
COL18A1-206ENST00000459895 ZNF846Q147U1 533 aa10.03□□□□□ -0.8
COL18A1-206ENST00000459895 RBMS2Q15434 407 aaKnown RBP10.03□□□□□ -0.8
COL18A1-206ENST00000459895 C2orf68Q2NKX9 166 aa10.03□□□□□ -0.8
COL18A1-206ENST00000459895 TRIM16LQ309B1 348 aa10.03□□□□□ -0.8
COL18A1-206ENST00000459895 NSUN5P1Q3KNT7 163 aa10.03□□□□□ -0.8
COL18A1-206ENST00000459895 C18orf65Q6ZTR6 163 aa10.03□□□□□ -0.8
COL18A1-206ENST00000459895 NDUFA11Q86Y39 141 aa10.03□□□□□ -0.8
COL18A1-206ENST00000459895 MINDY2Q8NBR6 621 aa10.03□□□□□ -0.8
COL18A1-206ENST00000459895 LFNGQ8NES3 379 aa10.03□□□□□ -0.8
COL18A1-206ENST00000459895 OR4A5Q8NH83 315 aa10.03□□□□□ -0.8
COL18A1-206ENST00000459895 SEC22AQ96IW7 307 aa10.03□□□□□ -0.8
COL18A1-206ENST00000459895 GON7Q9BXV9 100 aa10.03□□□□□ -0.8
COL18A1-206ENST00000459895 TMEM222Q9H0R3 208 aa10.03□□□□□ -0.8
COL18A1-206ENST00000459895 TBC1D24Q9ULP9 559 aa10.03□□□□□ -0.8
COL18A1-206ENST00000459895 A0A0G2JRQ6 117 aa10.02□□□□□ -0.81
COL18A1-206ENST00000459895 TEX13DA0A0J9YY54 714 aaPredicted RBP10.02□□□□□ -0.81
COL18A1-206ENST00000459895 TCRBV4S1A1TA0A5B7 111 aa10.02□□□□□ -0.81
COL18A1-206ENST00000459895 NAP1L6A6NFF2 107 aa10.02□□□□□ -0.81
COL18A1-206ENST00000459895 CGB1A6NKQ9 187 aa10.02□□□□□ -0.81
COL18A1-206ENST00000459895 E7EUB6 86 aa10.02□□□□□ -0.81
COL18A1-206ENST00000459895 UPK2O00526 184 aa10.02□□□□□ -0.81
COL18A1-206ENST00000459895 PLA2G10O15496 165 aa10.02□□□□□ -0.81
COL18A1-206ENST00000459895 LYRM1O43325 122 aa10.02□□□□□ -0.81
COL18A1-206ENST00000459895 NDUFB6O95139 128 aa10.02□□□□□ -0.81
COL18A1-206ENST00000459895 IGLV1-40P01703 118 aa10.02□□□□□ -0.81
COL18A1-206ENST00000459895 OPN1MWP04001 364 aa10.02□□□□□ -0.81
COL18A1-206ENST00000459895 SERPINE2P07093 398 aa10.02□□□□□ -0.81
COL18A1-206ENST00000459895 IL6RP08887 468 aaPredicted RBP10.02□□□□□ -0.81
COL18A1-206ENST00000459895 OPN1MW2P0DN77 364 aa10.02□□□□□ -0.81
COL18A1-206ENST00000459895 OPN1MW3P0DN78 364 aa10.02□□□□□ -0.81
COL18A1-206ENST00000459895 RPL27AP46776 148 aaKnown RBP10.02□□□□□ -0.81
COL18A1-206ENST00000459895 AKR1C2P52895 323 aa10.02□□□□□ -0.81
COL18A1-206ENST00000459895 RPL23AP62750 156 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms