RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 MPLP40238 635 aa7.1□□□□□ -1.27
VPS50-208ENST00000458707 CATR1Q13166 79 aa7.1□□□□□ -1.27
VPS50-208ENST00000458707 SLAQ13239 276 aa7.1□□□□□ -1.27
VPS50-208ENST00000458707 OR5I1Q13606 314 aa7.1□□□□□ -1.27
VPS50-208ENST00000458707 C11orf42Q8N5U0 333 aa7.1□□□□□ -1.27
VPS50-208ENST00000458707 WDR31Q8NA23 367 aa7.1□□□□□ -1.27
VPS50-208ENST00000458707 PRSS33Q8NF86 280 aa7.1□□□□□ -1.27
VPS50-208ENST00000458707 APH1AQ96BI3 265 aa7.1□□□□□ -1.27
VPS50-208ENST00000458707 ZNF703Q9H7S9 590 aaPredicted RBP7.1□□□□□ -1.27
VPS50-208ENST00000458707 FSCN3Q9NQT6 498 aa7.1□□□□□ -1.27
VPS50-208ENST00000458707 PGPEP1Q9NXJ5 209 aa7.1□□□□□ -1.27
VPS50-208ENST00000458707 PILRBQ9UKJ0 227 aa7.1□□□□□ -1.27
VPS50-208ENST00000458707 WDR83OSQ9Y284 106 aa7.1□□□□□ -1.27
VPS50-208ENST00000458707 TRAV9-1A0A075B6T8 112 aa7.09□□□□□ -1.27
VPS50-208ENST00000458707 H0Y8G0 127 aa7.09□□□□□ -1.27
VPS50-208ENST00000458707 YPEL1O60688 119 aa7.09□□□□□ -1.27
VPS50-208ENST00000458707 S1PR2O95136 353 aa7.09□□□□□ -1.27
VPS50-208ENST00000458707 SCGB1D1O95968 90 aa7.09□□□□□ -1.27
VPS50-208ENST00000458707 SELEP16581 610 aa7.09□□□□□ -1.27
VPS50-208ENST00000458707 GCH1P30793 250 aa7.09□□□□□ -1.27
VPS50-208ENST00000458707 OTX2P32243 289 aa7.09□□□□□ -1.27
VPS50-208ENST00000458707 PMP22Q01453 160 aa7.09□□□□□ -1.27
VPS50-208ENST00000458707 TMEM256Q8N2U0 113 aa7.09□□□□□ -1.27
VPS50-208ENST00000458707 UBALD1Q8TB05 177 aa7.09□□□□□ -1.27
VPS50-208ENST00000458707 GALMQ96C23 342 aa7.09□□□□□ -1.27
VPS50-208ENST00000458707 YPEL2Q96QA6 119 aa7.09□□□□□ -1.27
VPS50-208ENST00000458707 FAM173AQ9BQD7 235 aa7.09□□□□□ -1.27
VPS50-208ENST00000458707 OR2D2Q9H210 308 aa7.09□□□□□ -1.27
VPS50-208ENST00000458707 HES4Q9HCC6 221 aa7.09□□□□□ -1.27
VPS50-208ENST00000458707 CBLN4Q9NTU7 201 aa7.09□□□□□ -1.27
VPS50-208ENST00000458707 KCNIP1Q9NZI2 227 aa7.09□□□□□ -1.27
VPS50-208ENST00000458707 DSCAML1Q8TD84 2053 aa7.09□□□□□ -1.27
VPS50-208ENST00000458707 TMEM30CPA0ZSE6 113 aa7.09□□□□□ -1.28
VPS50-208ENST00000458707 OOEPA6NGQ2 149 aa7.09□□□□□ -1.28
VPS50-208ENST00000458707 C15orf62A8K5M9 175 aa7.09□□□□□ -1.28
VPS50-208ENST00000458707 C17orf98A8MV24 154 aa7.09□□□□□ -1.28
VPS50-208ENST00000458707 NUPR1O60356 82 aa7.09□□□□□ -1.28
VPS50-208ENST00000458707 MPDU1O75352 247 aa7.09□□□□□ -1.28
VPS50-208ENST00000458707 MT-CO3P00414 261 aa7.09□□□□□ -1.28
VPS50-208ENST00000458707 HPRT1P00492 218 aa7.09□□□□□ -1.28
VPS50-208ENST00000458707 SPINK2P20155 84 aa7.09□□□□□ -1.28
VPS50-208ENST00000458707 ATP5G3P48201 142 aa7.09□□□□□ -1.28
VPS50-208ENST00000458707 SRYQ05066 204 aa7.09□□□□□ -1.28
VPS50-208ENST00000458707 ZNF816Q0VGE8 651 aaPredicted RBP7.09□□□□□ -1.28
VPS50-208ENST00000458707 RNF151Q2KHN1 245 aa7.09□□□□□ -1.28
VPS50-208ENST00000458707 C5orf64Q2M2E5 130 aa7.09□□□□□ -1.28
VPS50-208ENST00000458707 ZNF766Q5HY98 468 aa7.09□□□□□ -1.28
VPS50-208ENST00000458707 Q5PR19 223 aa7.09□□□□□ -1.28
VPS50-208ENST00000458707 SLC35E4Q6ICL7 350 aa7.09□□□□□ -1.28
VPS50-208ENST00000458707 TMEM108Q6UXF1 575 aa7.09□□□□□ -1.28
VPS50-208ENST00000458707 ZCCHC14Q8WYQ9 949 aaKnown RBP7.09□□□□□ -1.28
VPS50-208ENST00000458707 SFRP2Q96HF1 295 aa7.09□□□□□ -1.28
VPS50-208ENST00000458707 MS4A10Q96PG2 267 aa7.09□□□□□ -1.28
VPS50-208ENST00000458707 C20orf144Q9BQM9 153 aa7.09□□□□□ -1.28
VPS50-208ENST00000458707 TRBV20OR9-2A0A075B6H5 130 aa7.08□□□□□ -1.28
VPS50-208ENST00000458707 C12orf77C9JDV5 145 aa7.08□□□□□ -1.28
VPS50-208ENST00000458707 IFNL4K9M1U5 179 aa7.08□□□□□ -1.28
VPS50-208ENST00000458707 RBFOX2O43251 390 aaKnown RBP eCLIP7.08□□□□□ -1.28
VPS50-208ENST00000458707 NEURL1O76050 574 aa7.08□□□□□ -1.28
VPS50-208ENST00000458707 NDUFB4O95168 129 aa7.08□□□□□ -1.28
VPS50-208ENST00000458707 CELA3AP09093 270 aa7.08□□□□□ -1.28
VPS50-208ENST00000458707 C1QTNF9P0C862 333 aa7.08□□□□□ -1.28
VPS50-208ENST00000458707 DEFA4P12838 97 aa7.08□□□□□ -1.28
VPS50-208ENST00000458707 CD1BP29016 333 aa7.08□□□□□ -1.28
VPS50-208ENST00000458707 ADMP35318 185 aa7.08□□□□□ -1.28
VPS50-208ENST00000458707 RAB7AP51149 207 aa7.08□□□□□ -1.28
VPS50-208ENST00000458707 UBE2G2P60604 165 aa7.08□□□□□ -1.28
VPS50-208ENST00000458707 PAFAH1B2P68402 229 aa7.08□□□□□ -1.28
VPS50-208ENST00000458707 IGFBP7Q16270 282 aa7.08□□□□□ -1.28
VPS50-208ENST00000458707 PMS2CLQ68D20 193 aa7.08□□□□□ -1.28
VPS50-208ENST00000458707 SPINK14Q6IE38 97 aa7.08□□□□□ -1.28
VPS50-208ENST00000458707 TEX43Q6ZNM6 134 aa7.08□□□□□ -1.28
VPS50-208ENST00000458707 H2BFWTQ7Z2G1 175 aa7.08□□□□□ -1.28
VPS50-208ENST00000458707 ZNF114Q8NC26 417 aa7.08□□□□□ -1.28
VPS50-208ENST00000458707 SGMS2Q8NHU3 365 aa7.08□□□□□ -1.28
VPS50-208ENST00000458707 BCL2L2Q92843 193 aaPredicted RBP7.08□□□□□ -1.28
VPS50-208ENST00000458707 ABHD17AQ96GS6 310 aa7.08□□□□□ -1.28
VPS50-208ENST00000458707 GMPPAQ96IJ6 420 aaPredicted RBP7.08□□□□□ -1.28
VPS50-208ENST00000458707 SPXQ9BT56 116 aa7.08□□□□□ -1.28
VPS50-208ENST00000458707 DERL1Q9BUN8 251 aa7.08□□□□□ -1.28
VPS50-208ENST00000458707 OR2J1Q9GZK6 312 aa7.08□□□□□ -1.28
VPS50-208ENST00000458707 TMEM106BQ9NUM4 274 aa7.08□□□□□ -1.28
VPS50-208ENST00000458707 PLA2G3Q9NZ20 509 aa7.08□□□□□ -1.28
VPS50-208ENST00000458707 B4GALT7Q9UBV7 327 aa7.08□□□□□ -1.28
VPS50-208ENST00000458707 TP53TG3Q9ULZ0 132 aa7.08□□□□□ -1.28
VPS50-208ENST00000458707 TANC2Q9HCD6 1990 aa7.08□□□□□ -1.28
VPS50-208ENST00000458707 A0A1B0GUS0 222 aa7.07□□□□□ -1.28
VPS50-208ENST00000458707 MDFIC2A0A1B0GVS7 189 aa7.07□□□□□ -1.28
VPS50-208ENST00000458707 FAM90A9PA6NNJ1 464 aa7.07□□□□□ -1.28
VPS50-208ENST00000458707 ZNF891A8MT65 544 aaPredicted RBP7.07□□□□□ -1.28
VPS50-208ENST00000458707 CDIPTO14735 213 aa7.07□□□□□ -1.28
VPS50-208ENST00000458707 PSPNO60542 156 aa7.07□□□□□ -1.28
VPS50-208ENST00000458707 HAND1O96004 215 aa7.07□□□□□ -1.28
VPS50-208ENST00000458707 CRYAAP02489 173 aa7.07□□□□□ -1.28
VPS50-208ENST00000458707 STAG3L2P0CL84 134 aa7.07□□□□□ -1.28
VPS50-208ENST00000458707 TIMP3P35625 211 aa7.07□□□□□ -1.28
VPS50-208ENST00000458707 OPRK1P41145 380 aa7.07□□□□□ -1.28
VPS50-208ENST00000458707 DUSP3P51452 185 aaPredicted RBP7.07□□□□□ -1.28
VPS50-208ENST00000458707 TMPRSS3P57727 454 aa7.07□□□□□ -1.28
VPS50-208ENST00000458707 GABRA6Q16445 453 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms