RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 HIST1H1BP16401 226 aaKnown RBP16.2■□□□□ 0.18
CPNE1-220ENST00000458038 CBLN1P23435 193 aa16.2■□□□□ 0.18
CPNE1-220ENST00000458038 RPL27AP46776 148 aaKnown RBP16.2■□□□□ 0.18
CPNE1-220ENST00000458038 KLK9Q2XQG4 91 aa16.2■□□□□ 0.18
CPNE1-220ENST00000458038 ANKRD55Q3KP44 614 aa16.2■□□□□ 0.18
CPNE1-220ENST00000458038 AIFM2Q9BRQ8 373 aa16.2■□□□□ 0.18
CPNE1-220ENST00000458038 KLK9Q9UKQ9 250 aa16.2■□□□□ 0.18
CPNE1-220ENST00000458038 BLOC1S6Q9UL45 172 aa16.2■□□□□ 0.18
CPNE1-220ENST00000458038 HMX3A6NHT5 357 aa16.19■□□□□ 0.18
CPNE1-220ENST00000458038 HRASP01112 189 aa16.19■□□□□ 0.18
CPNE1-220ENST00000458038 CRYGCP07315 174 aa16.19■□□□□ 0.18
CPNE1-220ENST00000458038 IL6RP08887 468 aaPredicted RBP16.19■□□□□ 0.18
CPNE1-220ENST00000458038 ZNF735P0CB33 412 aa16.19■□□□□ 0.18
CPNE1-220ENST00000458038 NFYAP23511 347 aaPredicted RBP16.19■□□□□ 0.18
CPNE1-220ENST00000458038 ARL3P36405 182 aa16.19■□□□□ 0.18
CPNE1-220ENST00000458038 ZNF57Q68EA5 555 aaPredicted RBP16.19■□□□□ 0.18
CPNE1-220ENST00000458038 OR4A47Q6IF82 309 aa16.19■□□□□ 0.18
CPNE1-220ENST00000458038 PUSL1Q8N0Z8 303 aaKnown RBP16.19■□□□□ 0.18
CPNE1-220ENST00000458038 EPPK1P58107 5090 aaKnown RBP16.18■□□□□ 0.18
CPNE1-220ENST00000458038 J3QRK9 145 aa16.18■□□□□ 0.18
CPNE1-220ENST00000458038 IGLV2-14P01704 120 aa16.18■□□□□ 0.18
CPNE1-220ENST00000458038 RPL30P62888 115 aaKnown RBP16.18■□□□□ 0.18
CPNE1-220ENST00000458038 ZNF66Q6ZN08 573 aa16.18■□□□□ 0.18
CPNE1-220ENST00000458038 VKORC1L1Q8N0U8 176 aa16.18■□□□□ 0.18
CPNE1-220ENST00000458038 TCTEX1D2Q8WW35 142 aa16.18■□□□□ 0.18
CPNE1-220ENST00000458038 EEF1AKMT3Q96AZ1 226 aa16.18■□□□□ 0.18
CPNE1-220ENST00000458038 WDR89Q96FK6 387 aaPredicted RBP16.18■□□□□ 0.18
CPNE1-220ENST00000458038 FYTTD1Q96QD9 318 aaKnown RBP16.18■□□□□ 0.18
CPNE1-220ENST00000458038 TRBV7-1A0A0A6YYK4 115 aa16.17■□□□□ 0.18
CPNE1-220ENST00000458038 A8MWP6 167 aa16.17■□□□□ 0.18
CPNE1-220ENST00000458038 HLA-AP01891 365 aaKnown RBP16.17■□□□□ 0.18
CPNE1-220ENST00000458038 PSMB6P28072 239 aa16.17■□□□□ 0.18
CPNE1-220ENST00000458038 OR2B11Q5JQS5 317 aa16.17■□□□□ 0.18
CPNE1-220ENST00000458038 NRG4Q8WWG1 115 aa16.17■□□□□ 0.18
CPNE1-220ENST00000458038 FANCD2OSQ96PS1 177 aa16.17■□□□□ 0.18
CPNE1-220ENST00000458038 VCX3BQ9H321 246 aa16.17■□□□□ 0.18
CPNE1-220ENST00000458038 ELF5Q9UKW6 265 aaPredicted RBP16.17■□□□□ 0.18
CPNE1-220ENST00000458038 IGKV1D-13A0A0B4J2D9 117 aa16.16■□□□□ 0.18
CPNE1-220ENST00000458038 IGKV1-13P0DP09 117 aa16.16■□□□□ 0.18
CPNE1-220ENST00000458038 HSPA13P48723 471 aa16.16■□□□□ 0.18
CPNE1-220ENST00000458038 RPL8P62917 257 aaKnown RBP16.16■□□□□ 0.18
CPNE1-220ENST00000458038 EIF4EBP1Q13541 118 aaPredicted RBP16.16■□□□□ 0.18
CPNE1-220ENST00000458038 MSMO1Q15800 293 aa16.16■□□□□ 0.18
CPNE1-220ENST00000458038 CLEC19AQ6UXS0 136 aa16.16■□□□□ 0.18
CPNE1-220ENST00000458038 MFSD4AQ8N468 514 aa16.16■□□□□ 0.18
CPNE1-220ENST00000458038 OR52B4Q8NGK2 314 aa16.16■□□□□ 0.18
CPNE1-220ENST00000458038 OR4A5Q8NH83 315 aa16.16■□□□□ 0.18
CPNE1-220ENST00000458038 MARC2Q969Z3 335 aa16.16■□□□□ 0.18
CPNE1-220ENST00000458038 CXorf58Q96LI9 332 aa16.16■□□□□ 0.18
CPNE1-220ENST00000458038 CCDC140Q96MF4 163 aa16.16■□□□□ 0.18
CPNE1-220ENST00000458038 WFDC10AQ9H1F0 79 aa16.16■□□□□ 0.18
CPNE1-220ENST00000458038 ANXA10Q9UJ72 324 aa16.16■□□□□ 0.18
CPNE1-220ENST00000458038 TRAV25A0A0B4J276 109 aa16.15■□□□□ 0.18
CPNE1-220ENST00000458038 ZNF320A2RRD8 509 aa16.15■□□□□ 0.18
CPNE1-220ENST00000458038 NOTOA8MTQ0 251 aa16.15■□□□□ 0.18
CPNE1-220ENST00000458038 NDUFB8O95169 186 aa16.15■□□□□ 0.18
CPNE1-220ENST00000458038 CTRB1P17538 263 aa16.15■□□□□ 0.18
CPNE1-220ENST00000458038 GNG2P59768 71 aa16.15■□□□□ 0.18
CPNE1-220ENST00000458038 CTRB2Q6GPI1 263 aa16.15■□□□□ 0.18
CPNE1-220ENST00000458038 C22orf42Q6IC83 251 aa16.15■□□□□ 0.18
CPNE1-220ENST00000458038 TMEM61Q8N0U2 210 aa16.15■□□□□ 0.18
CPNE1-220ENST00000458038 GGTLC1Q9BX51 225 aa16.15■□□□□ 0.18
CPNE1-220ENST00000458038 SPATA2Q9UM82 520 aa16.15■□□□□ 0.18
CPNE1-220ENST00000458038 TMEM213A2RRL7 107 aa16.14■□□□□ 0.17
CPNE1-220ENST00000458038 E7EUB6 86 aa16.14■□□□□ 0.17
CPNE1-220ENST00000458038 DEFA4P12838 97 aa16.14■□□□□ 0.17
CPNE1-220ENST00000458038 TPRA1Q86W33 373 aa16.14■□□□□ 0.17
CPNE1-220ENST00000458038 NR2C2APQ86WQ0 139 aa16.14■□□□□ 0.17
CPNE1-220ENST00000458038 UXS1Q8NBZ7 420 aa16.14■□□□□ 0.17
CPNE1-220ENST00000458038 BET1LQ9NYM9 111 aa16.14■□□□□ 0.17
CPNE1-220ENST00000458038 BIRC6Q9NR09 4857 aa16.14■□□□□ 0.17
CPNE1-220ENST00000458038 LOC102724200A0A096LPH7 203 aaPredicted RBP16.13■□□□□ 0.17
CPNE1-220ENST00000458038 A0A1B0GW64 132 aa16.13■□□□□ 0.17
CPNE1-220ENST00000458038 TMEM235A6NFC5 223 aa16.13■□□□□ 0.17
CPNE1-220ENST00000458038 MRPS14O60783 128 aaKnown RBP16.13■□□□□ 0.17
CPNE1-220ENST00000458038 AREGP15514 252 aa16.13■□□□□ 0.17
CPNE1-220ENST00000458038 FGF9P31371 208 aaPredicted RBP16.13■□□□□ 0.17
CPNE1-220ENST00000458038 BRWD1-AS2P59051 145 aa16.13■□□□□ 0.17
CPNE1-220ENST00000458038 ZBTB34Q8NCN2 500 aa16.13■□□□□ 0.17
CPNE1-220ENST00000458038 NUDCD2Q8WVJ2 157 aa16.13■□□□□ 0.17
CPNE1-220ENST00000458038 TAS2R8Q9NYW2 309 aa16.13■□□□□ 0.17
CPNE1-220ENST00000458038 MLXQ9UH92 298 aa16.13■□□□□ 0.17
CPNE1-220ENST00000458038 RBFOX2O43251 390 aaKnown RBP eCLIP16.12■□□□□ 0.173e-14■■■■■ 31.7
CPNE1-220ENST00000458038 IGHV3-23P01764 117 aa16.12■□□□□ 0.17
CPNE1-220ENST00000458038 HLA-GP17693 338 aa16.12■□□□□ 0.17
CPNE1-220ENST00000458038 EDN2P20800 178 aa16.12■□□□□ 0.17
CPNE1-220ENST00000458038 ELLP55199 621 aaPredicted RBP16.12■□□□□ 0.17
CPNE1-220ENST00000458038 CACNG8Q8WXS5 425 aa16.12■□□□□ 0.17
CPNE1-220ENST00000458038 SRSF8Q9BRL6 282 aaKnown RBP16.12■□□□□ 0.17
CPNE1-220ENST00000458038 OVOL2Q9BRP0 275 aa16.12■□□□□ 0.17
CPNE1-220ENST00000458038 THYN1Q9P016 225 aa16.12■□□□□ 0.17
CPNE1-220ENST00000458038 IGLV11-55A0A075B6I3 123 aa16.11■□□□□ 0.17
CPNE1-220ENST00000458038 CYB5BO43169 146 aa16.11■□□□□ 0.17
CPNE1-220ENST00000458038 CLEC3BP05452 202 aa16.11■□□□□ 0.17
CPNE1-220ENST00000458038 FGF2P09038 288 aa16.11■□□□□ 0.17
CPNE1-220ENST00000458038 C8orf88P0DMB2 117 aa16.11■□□□□ 0.17
CPNE1-220ENST00000458038 RBPMS2Q6ZRY4 209 aaKnown RBP16.11■□□□□ 0.17
CPNE1-220ENST00000458038 SSX9Q7RTT3 188 aa16.11■□□□□ 0.17
CPNE1-220ENST00000458038 MRPL27Q9P0M9 148 aaKnown RBP16.11■□□□□ 0.17
CPNE1-220ENST00000458038 SSX5O60225 188 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms