RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 LGALSLQ3ZCW2 172 aaPredicted RBP7.21□□□□□ -1.26
CDC42EP3-204ENST00000457889 OR4A47Q6IF82 309 aa7.21□□□□□ -1.26
CDC42EP3-204ENST00000457889 TEX29Q8N6K0 151 aa7.21□□□□□ -1.26
CDC42EP3-204ENST00000457889 OR5B3Q8NH48 314 aa7.21□□□□□ -1.26
CDC42EP3-204ENST00000457889 OR4A16Q8NH70 328 aa7.21□□□□□ -1.26
CDC42EP3-204ENST00000457889 GRPEL2Q8TAA5 225 aa7.21□□□□□ -1.26
CDC42EP3-204ENST00000457889 CLCC1Q96S66 551 aa7.21□□□□□ -1.26
CDC42EP3-204ENST00000457889 FOXC2Q99958 501 aa7.21□□□□□ -1.26
CDC42EP3-204ENST00000457889 REG4Q9BYZ8 158 aa7.21□□□□□ -1.26
CDC42EP3-204ENST00000457889 MS4A7Q9GZW8 240 aaPredicted RBP7.21□□□□□ -1.26
CDC42EP3-204ENST00000457889 SLA2Q9H6Q3 261 aa7.21□□□□□ -1.26
CDC42EP3-204ENST00000457889 LYRM2Q9NU23 88 aaPredicted RBP7.21□□□□□ -1.26
CDC42EP3-204ENST00000457889 TMEM14BQ9NUH8 114 aa7.21□□□□□ -1.26
CDC42EP3-204ENST00000457889 OR5AC2Q9NZP5 309 aa7.21□□□□□ -1.26
CDC42EP3-204ENST00000457889 ZNRD1Q9P1U0 126 aa7.21□□□□□ -1.26
CDC42EP3-204ENST00000457889 LSM5Q9Y4Y9 91 aaKnown RBP7.21□□□□□ -1.26
CDC42EP3-204ENST00000457889 AUP1Q9Y679 476 aa7.21□□□□□ -1.26
CDC42EP3-204ENST00000457889 KANTRA0A1W2PQU2 76 aa7.2□□□□□ -1.26
CDC42EP3-204ENST00000457889 BCL2L11O43521 198 aa7.2□□□□□ -1.26
CDC42EP3-204ENST00000457889 SSSCA1O60232 199 aa7.2□□□□□ -1.26
CDC42EP3-204ENST00000457889 RBMXL2O75526 392 aaKnown RBP7.2□□□□□ -1.26
CDC42EP3-204ENST00000457889 KBTBD11O94819 623 aa7.2□□□□□ -1.26
CDC42EP3-204ENST00000457889 IGKV1-16P04430 117 aa7.2□□□□□ -1.26
CDC42EP3-204ENST00000457889 IL6RP08887 468 aaPredicted RBP7.2□□□□□ -1.26
CDC42EP3-204ENST00000457889 CXCL2P19875 107 aa7.2□□□□□ -1.26
CDC42EP3-204ENST00000457889 RPL12P30050 165 aaKnown RBP7.2□□□□□ -1.26
CDC42EP3-204ENST00000457889 BRS3P32247 399 aa7.2□□□□□ -1.26
CDC42EP3-204ENST00000457889 MAS1LP35410 378 aa7.2□□□□□ -1.26
CDC42EP3-204ENST00000457889 REG1BP48304 166 aa7.2□□□□□ -1.26
CDC42EP3-204ENST00000457889 LINC00205P59089 165 aa7.2□□□□□ -1.26
CDC42EP3-204ENST00000457889 RPP30P78346 268 aaKnown RBP7.2□□□□□ -1.26
CDC42EP3-204ENST00000457889 CXorf66Q5JRM2 361 aaPredicted RBP7.2□□□□□ -1.26
CDC42EP3-204ENST00000457889 Q6ZRM9 215 aa7.2□□□□□ -1.26
CDC42EP3-204ENST00000457889 TMUB2Q71RG4 321 aa7.2□□□□□ -1.26
CDC42EP3-204ENST00000457889 MOB3BQ86TA1 216 aa7.2□□□□□ -1.26
CDC42EP3-204ENST00000457889 SLC51BQ86UW2 128 aa7.2□□□□□ -1.26
CDC42EP3-204ENST00000457889 MRPL41Q8IXM3 137 aaKnown RBP7.2□□□□□ -1.26
CDC42EP3-204ENST00000457889 PUSL1Q8N0Z8 303 aaKnown RBP7.2□□□□□ -1.26
CDC42EP3-204ENST00000457889 OR2C3Q8N628 320 aa7.2□□□□□ -1.26
CDC42EP3-204ENST00000457889 TEX45Q8NA69 505 aa7.2□□□□□ -1.26
CDC42EP3-204ENST00000457889 OR8H1Q8NGG4 311 aa7.2□□□□□ -1.26
CDC42EP3-204ENST00000457889 TMEM167AQ8TBQ9 72 aa7.2□□□□□ -1.26
CDC42EP3-204ENST00000457889 SMIM8Q96KF7 97 aa7.2□□□□□ -1.26
CDC42EP3-204ENST00000457889 ARL6Q9H0F7 186 aa7.2□□□□□ -1.26
CDC42EP3-204ENST00000457889 C11orf1Q9H5F2 150 aa7.2□□□□□ -1.26
CDC42EP3-204ENST00000457889 ABCA2Q9BZC7 2435 aa7.19□□□□□ -1.26
CDC42EP3-204ENST00000457889 IGHV1-69DA0A0B4J2H0 117 aa7.19□□□□□ -1.26
CDC42EP3-204ENST00000457889 UPK2O00526 184 aa7.19□□□□□ -1.26
CDC42EP3-204ENST00000457889 RGS13O14921 159 aa7.19□□□□□ -1.26
CDC42EP3-204ENST00000457889 TIMM23O14925 209 aa7.19□□□□□ -1.26
CDC42EP3-204ENST00000457889 NPFFO15130 113 aa7.19□□□□□ -1.26
CDC42EP3-204ENST00000457889 VENTXO95231 258 aa7.19□□□□□ -1.26
CDC42EP3-204ENST00000457889 MOSP00540 346 aa7.19□□□□□ -1.26
CDC42EP3-204ENST00000457889 IGHV1-69P01742 117 aa7.19□□□□□ -1.26
CDC42EP3-204ENST00000457889 SAA1P0DJI8 122 aaPredicted RBP7.19□□□□□ -1.26
CDC42EP3-204ENST00000457889 DYNLT3P51808 116 aa7.19□□□□□ -1.26
CDC42EP3-204ENST00000457889 AP2S1P53680 142 aaPredicted RBP7.19□□□□□ -1.26
CDC42EP3-204ENST00000457889 RPS16P62249 146 aaKnown RBP7.19□□□□□ -1.26
CDC42EP3-204ENST00000457889 POLR2GP62487 172 aaKnown RBP eCLIP7.19□□□□□ -1.26
CDC42EP3-204ENST00000457889 RPL8P62917 257 aaKnown RBP7.19□□□□□ -1.26
CDC42EP3-204ENST00000457889 UBA52P62987 128 aaKnown RBP7.19□□□□□ -1.26
CDC42EP3-204ENST00000457889 KLRD1Q13241 179 aa7.19□□□□□ -1.26
CDC42EP3-204ENST00000457889 OPCMLQ14982 345 aa7.19□□□□□ -1.26
CDC42EP3-204ENST00000457889 ZNF767PQ75MW2 155 aa7.19□□□□□ -1.26
CDC42EP3-204ENST00000457889 STX12Q86Y82 276 aa7.19□□□□□ -1.26
CDC42EP3-204ENST00000457889 THNSL2Q86YJ6 484 aa7.19□□□□□ -1.26
CDC42EP3-204ENST00000457889 STPG2Q8N412 459 aa7.19□□□□□ -1.26
CDC42EP3-204ENST00000457889 OR2T10Q8NGZ9 312 aa7.19□□□□□ -1.26
CDC42EP3-204ENST00000457889 ARPC5LQ9BPX5 153 aa7.19□□□□□ -1.26
CDC42EP3-204ENST00000457889 KRTAP9-2Q9BYQ4 174 aa7.19□□□□□ -1.26
CDC42EP3-204ENST00000457889 ZC4H2Q9NQZ6 224 aa7.19□□□□□ -1.26
CDC42EP3-204ENST00000457889 HIF1ANQ9NWT6 349 aa7.19□□□□□ -1.26
CDC42EP3-204ENST00000457889 NUP50Q9UKX7 468 aa7.19□□□□□ -1.26
CDC42EP3-204ENST00000457889 ARHGAP32A7KAX9 2087 aa7.18□□□□□ -1.26
CDC42EP3-204ENST00000457889 CENPVL3A0A0U1RRI6 287 aa7.18□□□□□ -1.26
CDC42EP3-204ENST00000457889 INS-IGF2F8WCM5 200 aa7.18□□□□□ -1.26
CDC42EP3-204ENST00000457889 CHST1O43916 411 aa7.18□□□□□ -1.26
CDC42EP3-204ENST00000457889 JTBO76095 146 aa7.18□□□□□ -1.26
CDC42EP3-204ENST00000457889 IFNA7P01567 189 aa7.18□□□□□ -1.26
CDC42EP3-204ENST00000457889 IFNA17P01571 189 aa7.18□□□□□ -1.26
CDC42EP3-204ENST00000457889 OR9G9P0C7N8 305 aa7.18□□□□□ -1.26
CDC42EP3-204ENST00000457889 FAM106CPP0CH98 169 aa7.18□□□□□ -1.26
CDC42EP3-204ENST00000457889 HKR1P10072 659 aa7.18□□□□□ -1.26
CDC42EP3-204ENST00000457889 SAA4P35542 130 aa7.18□□□□□ -1.26
CDC42EP3-204ENST00000457889 CAV2P51636 162 aa7.18□□□□□ -1.26
CDC42EP3-204ENST00000457889 HSPE1P61604 102 aaKnown RBP7.18□□□□□ -1.26
CDC42EP3-204ENST00000457889 HBG1P69891 147 aa7.18□□□□□ -1.26
CDC42EP3-204ENST00000457889 HBG2P69892 147 aa7.18□□□□□ -1.26
CDC42EP3-204ENST00000457889 EBI3Q14213 229 aa7.18□□□□□ -1.26
CDC42EP3-204ENST00000457889 DIAPH2-AS1Q14236 149 aa7.18□□□□□ -1.26
CDC42EP3-204ENST00000457889 AANATQ16613 207 aa7.18□□□□□ -1.26
CDC42EP3-204ENST00000457889 TMEM249Q2WGJ8 235 aa7.18□□□□□ -1.26
CDC42EP3-204ENST00000457889 SSX9Q7RTT3 188 aa7.18□□□□□ -1.26
CDC42EP3-204ENST00000457889 HSD17B13Q7Z5P4 300 aaPredicted RBP7.18□□□□□ -1.26
CDC42EP3-204ENST00000457889 KRTAP1-3Q8IUG1 177 aa7.18□□□□□ -1.26
CDC42EP3-204ENST00000457889 MMD2Q8IY49 270 aa7.18□□□□□ -1.26
CDC42EP3-204ENST00000457889 STOML3Q8TAV4 291 aa7.18□□□□□ -1.26
CDC42EP3-204ENST00000457889 DTD1Q8TEA8 209 aa7.18□□□□□ -1.26
CDC42EP3-204ENST00000457889 CFHR4Q92496 578 aa7.18□□□□□ -1.26
CDC42EP3-204ENST00000457889 PHYHIPLQ96FC7 376 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms