RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 THBS3P49746 956 aa11.39□□□□□ -0.59
TOP3B-213ENST00000457179 COMPP49747 757 aaPredicted RBP11.39□□□□□ -0.59
TOP3B-213ENST00000457179 FBLN7Q53RD9 439 aa11.39□□□□□ -0.59
TOP3B-213ENST00000457179 Q6ZSR3 168 aa11.39□□□□□ -0.59
TOP3B-213ENST00000457179 GPR146Q96CH1 333 aa11.39□□□□□ -0.59
TOP3B-213ENST00000457179 POM121L2Q96KW2 1035 aa11.39□□□□□ -0.59
TOP3B-213ENST00000457179 C1QTNF5Q9BXJ0 243 aa11.39□□□□□ -0.59
TOP3B-213ENST00000457179 UQCR10Q9UDW1 63 aa11.39□□□□□ -0.59
TOP3B-213ENST00000457179 CACNG5Q9UF02 275 aa11.39□□□□□ -0.59
TOP3B-213ENST00000457179 ERRFI1Q9UJM3 462 aaPredicted RBP11.39□□□□□ -0.59
TOP3B-213ENST00000457179 COL27A1Q8IZC6 1860 aaPredicted RBP11.39□□□□□ -0.59
TOP3B-213ENST00000457179 TRAPPC2LH3BP13 241 aa11.39□□□□□ -0.59
TOP3B-213ENST00000457179 TGFBR3Q03167 851 aa11.39□□□□□ -0.59
TOP3B-213ENST00000457179 TMEM45BQ96B21 275 aa11.39□□□□□ -0.59
TOP3B-213ENST00000457179 NEIL1Q96FI4 390 aaPredicted RBP11.39□□□□□ -0.59
TOP3B-213ENST00000457179 OBP2BQ9NPH6 170 aa11.39□□□□□ -0.59
TOP3B-213ENST00000457179 SVEP1Q4LDE5 3571 aa11.38□□□□□ -0.59
TOP3B-213ENST00000457179 K7EP13 123 aa11.38□□□□□ -0.59
TOP3B-213ENST00000457179 FAM214BQ7L5A3 538 aa11.38□□□□□ -0.59
TOP3B-213ENST00000457179 HAPLN4Q86UW8 402 aa11.38□□□□□ -0.59
TOP3B-213ENST00000457179 ZNF114Q8NC26 417 aa11.38□□□□□ -0.59
TOP3B-213ENST00000457179 COX11Q9Y6N1 276 aa11.38□□□□□ -0.59
TOP3B-213ENST00000457179 C11orf94C9JXX5 98 aa11.38□□□□□ -0.59
TOP3B-213ENST00000457179 CDIPTO14735 213 aa11.38□□□□□ -0.59
TOP3B-213ENST00000457179 SERPINE2P07093 398 aa11.38□□□□□ -0.59
TOP3B-213ENST00000457179 ACSM6Q6P461 480 aa11.38□□□□□ -0.59
TOP3B-213ENST00000457179 Q6ZRM9 215 aa11.38□□□□□ -0.59
TOP3B-213ENST00000457179 TMEM204Q9BSN7 226 aa11.38□□□□□ -0.59
TOP3B-213ENST00000457179 REPIN1Q9BWE0 567 aaKnown RBP11.38□□□□□ -0.59
TOP3B-213ENST00000457179 PLSCR2Q9NRY7 297 aa11.38□□□□□ -0.59
TOP3B-213ENST00000457179 ZNF586Q9NXT0 402 aa11.38□□□□□ -0.59
TOP3B-213ENST00000457179 ELOVL5Q9NYP7 299 aa11.38□□□□□ -0.59
TOP3B-213ENST00000457179 SLC45A2Q9UMX9 530 aa11.38□□□□□ -0.59
TOP3B-213ENST00000457179 BSNQ9UPA5 3926 aa11.38□□□□□ -0.59
TOP3B-213ENST00000457179 ACACBO00763 2458 aa11.37□□□□□ -0.59
TOP3B-213ENST00000457179 KIAA1324LA8MWY0 1029 aaPredicted RBP11.37□□□□□ -0.59
TOP3B-213ENST00000457179 WNT2P09544 360 aa11.37□□□□□ -0.59
TOP3B-213ENST00000457179 ZNF16P17020 682 aaPredicted RBP11.37□□□□□ -0.59
TOP3B-213ENST00000457179 NPPCP23582 126 aa11.37□□□□□ -0.59
TOP3B-213ENST00000457179 ARR3P36575 388 aa11.37□□□□□ -0.59
TOP3B-213ENST00000457179 CEBPDP49716 269 aaPredicted RBP11.37□□□□□ -0.59
TOP3B-213ENST00000457179 HBG1P69891 147 aa11.37□□□□□ -0.59
TOP3B-213ENST00000457179 HBG2P69892 147 aa11.37□□□□□ -0.59
TOP3B-213ENST00000457179 SERF2P84101 59 aa11.37□□□□□ -0.59
TOP3B-213ENST00000457179 LRRC75BQ2VPJ9 315 aa11.37□□□□□ -0.59
TOP3B-213ENST00000457179 C20orf204Q6ZNR8 217 aa11.37□□□□□ -0.59
TOP3B-213ENST00000457179 ZNF826PQ6ZT77 177 aa11.37□□□□□ -0.59
TOP3B-213ENST00000457179 LINC01551Q86U37 167 aa11.37□□□□□ -0.59
TOP3B-213ENST00000457179 MKXQ8IYA7 352 aa11.37□□□□□ -0.59
TOP3B-213ENST00000457179 WDR61Q9GZS3 305 aaKnown RBP11.37□□□□□ -0.59
TOP3B-213ENST00000457179 RBM7Q9Y580 266 aaKnown RBP11.37□□□□□ -0.59
TOP3B-213ENST00000457179 SPINK4O60575 86 aa11.37□□□□□ -0.59
TOP3B-213ENST00000457179 NDUFB4O95168 129 aa11.37□□□□□ -0.59
TOP3B-213ENST00000457179 AMTP48728 403 aa11.37□□□□□ -0.59
TOP3B-213ENST00000457179 ST6GALNAC3Q8NDV1 305 aa11.37□□□□□ -0.59
TOP3B-213ENST00000457179 NUDT10Q8NFP7 164 aa11.37□□□□□ -0.59
TOP3B-213ENST00000457179 TAF15Q92804 592 aaKnown RBP eCLIP11.37□□□□□ -0.59
TOP3B-213ENST00000457179 PINX1Q96BK5 328 aaKnown RBP11.37□□□□□ -0.59
TOP3B-213ENST00000457179 PLPPR2Q96GM1 343 aa11.37□□□□□ -0.59
TOP3B-213ENST00000457179 ABHD14BQ96IU4 210 aa11.37□□□□□ -0.59
TOP3B-213ENST00000457179 PSMG3Q9BT73 122 aaPredicted RBP11.37□□□□□ -0.59
TOP3B-213ENST00000457179 MRPL18Q9H0U6 180 aaKnown RBP11.37□□□□□ -0.59
TOP3B-213ENST00000457179 ANKHD1Q8IWZ3 2542 aaKnown RBP11.37□□□□□ -0.59
TOP3B-213ENST00000457179 SIRPB1O00241 398 aa11.37□□□□□ -0.59
TOP3B-213ENST00000457179 SYNGR2O43760 224 aa11.37□□□□□ -0.59
TOP3B-213ENST00000457179 NAPSAO96009 420 aa11.37□□□□□ -0.59
TOP3B-213ENST00000457179 IGLC2P0DOY2 106 aa11.37□□□□□ -0.59
TOP3B-213ENST00000457179 IGLC3P0DOY3 106 aa11.37□□□□□ -0.59
TOP3B-213ENST00000457179 PSG2P11465 335 aa11.37□□□□□ -0.59
TOP3B-213ENST00000457179 ASCL4Q6XD76 172 aa11.37□□□□□ -0.59
TOP3B-213ENST00000457179 C1orf174Q8IYL3 243 aa11.37□□□□□ -0.59
TOP3B-213ENST00000457179 RAB40CQ96S21 281 aa11.37□□□□□ -0.59
TOP3B-213ENST00000457179 PRDM14Q9GZV8 571 aa11.37□□□□□ -0.59
TOP3B-213ENST00000457179 GSX1Q9H4S2 264 aaPredicted RBP11.37□□□□□ -0.59
TOP3B-213ENST00000457179 TBL2Q9Y4P3 447 aaKnown RBP11.37□□□□□ -0.59
TOP3B-213ENST00000457179 FRMD6-AS1P0C7T7 363 aa11.36□□□□□ -0.59
TOP3B-213ENST00000457179 UCP1P25874 307 aa11.36□□□□□ -0.59
TOP3B-213ENST00000457179 ZNF90Q03938 601 aa11.36□□□□□ -0.59
TOP3B-213ENST00000457179 TBC1D28Q2M2D7 210 aa11.36□□□□□ -0.59
TOP3B-213ENST00000457179 OR10G9Q8NGN4 311 aa11.36□□□□□ -0.59
TOP3B-213ENST00000457179 OR10G7Q8NGN6 311 aa11.36□□□□□ -0.59
TOP3B-213ENST00000457179 SLC25A40Q8TBP6 338 aa11.36□□□□□ -0.59
TOP3B-213ENST00000457179 RPH3ALQ9UNE2 315 aa11.36□□□□□ -0.59
TOP3B-213ENST00000457179 MDFIC2A0A1B0GVS7 189 aa11.36□□□□□ -0.59
TOP3B-213ENST00000457179 ZNF891A8MT65 544 aaPredicted RBP11.36□□□□□ -0.59
TOP3B-213ENST00000457179 F6UZH7 168 aa11.36□□□□□ -0.59
TOP3B-213ENST00000457179 FCN1O00602 326 aa11.36□□□□□ -0.59
TOP3B-213ENST00000457179 KITLGP21583 273 aa11.36□□□□□ -0.59
TOP3B-213ENST00000457179 TMEM144Q7Z5S9 345 aa11.36□□□□□ -0.59
TOP3B-213ENST00000457179 SARAFQ96BY9 339 aa11.36□□□□□ -0.59
TOP3B-213ENST00000457179 GMPPAQ96IJ6 420 aaPredicted RBP11.36□□□□□ -0.59
TOP3B-213ENST00000457179 RNF2Q99496 336 aa11.36□□□□□ -0.59
TOP3B-213ENST00000457179 COL25A1Q9BXS0 654 aaPredicted RBP11.36□□□□□ -0.59
TOP3B-213ENST00000457179 RBFOX2O43251 390 aaKnown RBP eCLIP11.35□□□□□ -0.597e-8■■□□□ 13
TOP3B-213ENST00000457179 IER3P46695 156 aa11.35□□□□□ -0.59
TOP3B-213ENST00000457179 ATP5G3P48201 142 aa11.35□□□□□ -0.59
TOP3B-213ENST00000457179 SLC38A11Q08AI6 406 aa11.35□□□□□ -0.59
TOP3B-213ENST00000457179 KRTAP27-1Q3LI81 207 aa11.35□□□□□ -0.59
TOP3B-213ENST00000457179 TMEM211Q6ICI0 200 aa11.35□□□□□ -0.59
TOP3B-213ENST00000457179 MRGPRDQ8TDS7 321 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms