RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 FHL3Q13643 280 aa17.99■□□□□ 0.47
CBX3-204ENST00000456948 RNASE10Q5GAN6 216 aaKnown RBP17.99■□□□□ 0.47
CBX3-204ENST00000456948 VAX1Q5SQQ9 334 aa17.99■□□□□ 0.47
CBX3-204ENST00000456948 C9orf66Q5T8R8 295 aa17.99■□□□□ 0.47
CBX3-204ENST00000456948 VKORC1L1Q8N0U8 176 aa17.99■□□□□ 0.47
CBX3-204ENST00000456948 TMEM167AQ8TBQ9 72 aa17.99■□□□□ 0.47
CBX3-204ENST00000456948 GPHA2Q96T91 129 aa17.99■□□□□ 0.47
CBX3-204ENST00000456948 HRASLSQ9HDD0 168 aa17.99■□□□□ 0.47
CBX3-204ENST00000456948 DPPA5A6NC42 116 aa17.98■□□□□ 0.47
CBX3-204ENST00000456948 CCDC160A6NGH7 325 aa17.98■□□□□ 0.47
CBX3-204ENST00000456948 LINC01619G3V211 115 aa17.98■□□□□ 0.47
CBX3-204ENST00000456948 PGLYRP1O75594 196 aaPredicted RBP17.98■□□□□ 0.47
CBX3-204ENST00000456948 HSPB1P04792 205 aaKnown RBP17.98■□□□□ 0.47
CBX3-204ENST00000456948 OR9G9P0C7N8 305 aa17.98■□□□□ 0.47
CBX3-204ENST00000456948 ERVK-16P61578 105 aa17.98■□□□□ 0.47
CBX3-204ENST00000456948 SSBP1Q04837 148 aaKnown RBP17.98■□□□□ 0.47
CBX3-204ENST00000456948 SSX9Q7RTT3 188 aa17.98■□□□□ 0.47
CBX3-204ENST00000456948 PUSL1Q8N0Z8 303 aaKnown RBP17.98■□□□□ 0.47
CBX3-204ENST00000456948 DMBX1Q8NFW5 382 aa17.98■□□□□ 0.47
CBX3-204ENST00000456948 DYNC2LI1Q8TCX1 351 aa17.98■□□□□ 0.47
CBX3-204ENST00000456948 DIRAS2Q96HU8 199 aa17.98■□□□□ 0.47
CBX3-204ENST00000456948 USMG5Q96IX5 58 aa17.98■□□□□ 0.47
CBX3-204ENST00000456948 BET1LQ9NYM9 111 aa17.98■□□□□ 0.47
CBX3-204ENST00000456948 MTFP1Q9UDX5 166 aa17.98■□□□□ 0.47
CBX3-204ENST00000456948 CTDSP2O14595 271 aa17.97■□□□□ 0.47
CBX3-204ENST00000456948 RAMP3O60896 148 aa17.97■□□□□ 0.47
CBX3-204ENST00000456948 PRB2P02812 416 aaPredicted RBP17.97■□□□□ 0.47
CBX3-204ENST00000456948 F2RP25116 425 aa17.97■□□□□ 0.47
CBX3-204ENST00000456948 BRWD1-AS2P59051 145 aa17.97■□□□□ 0.47
CBX3-204ENST00000456948 RPL8P62917 257 aaKnown RBP17.97■□□□□ 0.47
CBX3-204ENST00000456948 RNASE12Q5GAN4 147 aaKnown RBP17.97■□□□□ 0.47
CBX3-204ENST00000456948 SLC38A6Q8IZM9 456 aa17.97■□□□□ 0.47
CBX3-204ENST00000456948 OR52I2Q8NH67 350 aa17.97■□□□□ 0.47
CBX3-204ENST00000456948 ISOC1Q96CN7 298 aa17.97■□□□□ 0.47
CBX3-204ENST00000456948 TINAGL1Q9GZM7 467 aaPredicted RBP17.97■□□□□ 0.47
CBX3-204ENST00000456948 C6orf62Q9GZU0 229 aaPredicted RBP17.97■□□□□ 0.47
CBX3-204ENST00000456948 COMMD9Q9P000 198 aa17.97■□□□□ 0.47
CBX3-204ENST00000456948 KLK11Q9UBX7 282 aa17.97■□□□□ 0.47
CBX3-204ENST00000456948 TGP01266 2768 aa17.97■□□□□ 0.47
CBX3-204ENST00000456948 SEC14L6B5MCN3 397 aa17.96■□□□□ 0.47
CBX3-204ENST00000456948 H3BMQ9 156 aa17.96■□□□□ 0.47
CBX3-204ENST00000456948 GABARAPH6UMI1 98 aa17.96■□□□□ 0.47
CBX3-204ENST00000456948 DHFRP00374 187 aa17.96■□□□□ 0.47
CBX3-204ENST00000456948 IGHV3-11P01762 117 aa17.96■□□□□ 0.47
CBX3-204ENST00000456948 RLN1P04808 185 aa17.96■□□□□ 0.47
CBX3-204ENST00000456948 RPL27AP46776 148 aaKnown RBP17.96■□□□□ 0.47
CBX3-204ENST00000456948 UCP3P55916 312 aa17.96■□□□□ 0.47
CBX3-204ENST00000456948 TAS2R19P59542 299 aa17.96■□□□□ 0.47
CBX3-204ENST00000456948 MRGPRG-AS1Q2M3A8 158 aa17.96■□□□□ 0.47
CBX3-204ENST00000456948 LAX1Q8IWV1 398 aa17.96■□□□□ 0.47
CBX3-204ENST00000456948 ARRDC1Q8N5I2 433 aa17.96■□□□□ 0.47
CBX3-204ENST00000456948 DGCR14Q96DF8 476 aaKnown RBP17.96■□□□□ 0.47
CBX3-204ENST00000456948 ABHD1Q96SE0 405 aa17.96■□□□□ 0.47
CBX3-204ENST00000456948 RANGRFQ9HD47 186 aaPredicted RBP17.96■□□□□ 0.47
CBX3-204ENST00000456948 APELAP0DMC3 54 aa17.95■□□□□ 0.46
CBX3-204ENST00000456948 INSL3P51460 131 aa17.95■□□□□ 0.46
CBX3-204ENST00000456948 IL18Q14116 193 aa17.95■□□□□ 0.46
CBX3-204ENST00000456948 POU2AF1Q16633 256 aa17.95■□□□□ 0.46
CBX3-204ENST00000456948 OR4A47Q6IF82 309 aa17.95■□□□□ 0.46
CBX3-204ENST00000456948 TMEM229BQ8NBD8 167 aa17.95■□□□□ 0.46
CBX3-204ENST00000456948 FYTTD1Q96QD9 318 aaKnown RBP17.95■□□□□ 0.46
CBX3-204ENST00000456948 MIXL1Q9H2W2 232 aa17.95■□□□□ 0.46
CBX3-204ENST00000456948 HLA-GP17693 338 aa17.94■□□□□ 0.46
CBX3-204ENST00000456948 EGFEM1PQ0D2K5 195 aa17.94■□□□□ 0.46
CBX3-204ENST00000456948 ASPHD1Q5U4P2 390 aa17.94■□□□□ 0.46
CBX3-204ENST00000456948 TTC9CQ8N5M4 171 aa17.94■□□□□ 0.46
CBX3-204ENST00000456948 ADAD2Q8NCV1 583 aaKnown RBP17.94■□□□□ 0.46
CBX3-204ENST00000456948 MRAPQ8TCY5 172 aa17.94■□□□□ 0.46
CBX3-204ENST00000456948 RSRP1Q9BUV0 290 aa17.94■□□□□ 0.46
CBX3-204ENST00000456948 COMMD5Q9GZQ3 224 aa17.94■□□□□ 0.46
CBX3-204ENST00000456948 FXYD6Q9H0Q3 95 aa17.94■□□□□ 0.46
CBX3-204ENST00000456948 FAM212BQ9NTI7 297 aaPredicted RBP17.94■□□□□ 0.46
CBX3-204ENST00000456948 AURKAIP1Q9NWT8 199 aaPredicted RBP17.94■□□□□ 0.46
CBX3-204ENST00000456948 ZNF257Q9Y2Q1 563 aa17.94■□□□□ 0.46
CBX3-204ENST00000456948 FAM223BA6NKX1 122 aa17.93■□□□□ 0.46
CBX3-204ENST00000456948 M0QYG6 137 aa17.93■□□□□ 0.46
CBX3-204ENST00000456948 OVOL1O14753 267 aa17.93■□□□□ 0.46
CBX3-204ENST00000456948 FGF2P09038 288 aa17.93■□□□□ 0.46
CBX3-204ENST00000456948 ZP3P21754 424 aa17.93■□□□□ 0.46
CBX3-204ENST00000456948 HOXD3P31249 432 aaPredicted RBP17.93■□□□□ 0.46
CBX3-204ENST00000456948 PHLDA2Q53GA4 152 aa17.93■□□□□ 0.46
CBX3-204ENST00000456948 FAM209BQ5JX69 171 aa17.93■□□□□ 0.46
CBX3-204ENST00000456948 FAM223AQ8IWN6 122 aa17.93■□□□□ 0.46
CBX3-204ENST00000456948 MCFD2Q8NI22 146 aa17.93■□□□□ 0.46
CBX3-204ENST00000456948 ALX4Q9H161 411 aaPredicted RBP17.93■□□□□ 0.46
CBX3-204ENST00000456948 RSL24D1Q9UHA3 163 aaKnown RBP17.93■□□□□ 0.46
CBX3-204ENST00000456948 CD3DP04234 171 aa17.92■□□□□ 0.46
CBX3-204ENST00000456948 PGAM2P15259 253 aa17.92■□□□□ 0.46
CBX3-204ENST00000456948 LPAR6P43657 344 aa17.92■□□□□ 0.46
CBX3-204ENST00000456948 DGCR2P98153 550 aa17.92■□□□□ 0.46
CBX3-204ENST00000456948 DCTN2Q13561 401 aaKnown RBP17.92■□□□□ 0.46
CBX3-204ENST00000456948 MEF2DQ14814 521 aa17.92■□□□□ 0.46
CBX3-204ENST00000456948 ZNF486Q96H40 463 aaPredicted RBP17.92■□□□□ 0.46
CBX3-204ENST00000456948 SLC2A9Q9NRM0 540 aa17.92■□□□□ 0.46
CBX3-204ENST00000456948 TMEM140Q9NV12 185 aa17.92■□□□□ 0.46
CBX3-204ENST00000456948 CEPT1Q9Y6K0 416 aa17.92■□□□□ 0.46
CBX3-204ENST00000456948 PRKDCP78527 4128 aaKnown RBP17.91■□□□□ 0.46
CBX3-204ENST00000456948 IGHV4OR15-8A0A075B7B6 117 aa17.91■□□□□ 0.46
CBX3-204ENST00000456948 A0A087WW49 117 aa17.91■□□□□ 0.46
CBX3-204ENST00000456948 UPK2O00526 184 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms