RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 DIRAS2Q96HU8 199 aa14.03□□□□□ -0.16
PDLIM2-215ENST00000456545 C6orf62Q9GZU0 229 aaPredicted RBP14.03□□□□□ -0.16
PDLIM2-215ENST00000456545 ALX4Q9H161 411 aaPredicted RBP14.03□□□□□ -0.16
PDLIM2-215ENST00000456545 CCDC59Q9P031 241 aaKnown RBP14.03□□□□□ -0.16
PDLIM2-215ENST00000456545 LINC01619G3V211 115 aa14.02□□□□□ -0.17
PDLIM2-215ENST00000456545 M0QYG6 137 aa14.02□□□□□ -0.17
PDLIM2-215ENST00000456545 PGLYRP1O75594 196 aaPredicted RBP14.02□□□□□ -0.17
PDLIM2-215ENST00000456545 RLN1P04808 185 aa14.02□□□□□ -0.17
PDLIM2-215ENST00000456545 OR9G9P0C7N8 305 aa14.02□□□□□ -0.17
PDLIM2-215ENST00000456545 NQO2P16083 231 aa14.02□□□□□ -0.17
PDLIM2-215ENST00000456545 HOXD3P31249 432 aaPredicted RBP14.02□□□□□ -0.17
PDLIM2-215ENST00000456545 MAS1LP35410 378 aa14.02□□□□□ -0.17
PDLIM2-215ENST00000456545 BRWD1-AS2P59051 145 aa14.02□□□□□ -0.17
PDLIM2-215ENST00000456545 TAS2R31P59538 309 aa14.02□□□□□ -0.17
PDLIM2-215ENST00000456545 ERVK-16P61578 105 aa14.02□□□□□ -0.17
PDLIM2-215ENST00000456545 MRGPRG-AS1Q2M3A8 158 aa14.02□□□□□ -0.17
PDLIM2-215ENST00000456545 RNASE10Q5GAN6 216 aaKnown RBP14.02□□□□□ -0.17
PDLIM2-215ENST00000456545 C9orf66Q5T8R8 295 aa14.02□□□□□ -0.17
PDLIM2-215ENST00000456545 TMEM167AQ8TBQ9 72 aa14.02□□□□□ -0.17
PDLIM2-215ENST00000456545 DYNC2LI1Q8TCX1 351 aa14.02□□□□□ -0.17
PDLIM2-215ENST00000456545 ISOC1Q96CN7 298 aa14.02□□□□□ -0.17
PDLIM2-215ENST00000456545 FYTTD1Q96QD9 318 aaKnown RBP14.02□□□□□ -0.17
PDLIM2-215ENST00000456545 ABHD1Q96SE0 405 aa14.02□□□□□ -0.17
PDLIM2-215ENST00000456545 MIXL1Q9H2W2 232 aa14.02□□□□□ -0.17
PDLIM2-215ENST00000456545 NOTCH3Q9UM47 2321 aa14.01□□□□□ -0.17
PDLIM2-215ENST00000456545 SEC14L6B5MCN3 397 aa14.01□□□□□ -0.17
PDLIM2-215ENST00000456545 HSPB1P04792 205 aaKnown RBP14.01□□□□□ -0.17
PDLIM2-215ENST00000456545 RPL27AP46776 148 aaKnown RBP14.01□□□□□ -0.17
PDLIM2-215ENST00000456545 IL18Q14116 193 aa14.01□□□□□ -0.17
PDLIM2-215ENST00000456545 PHLDA2Q53GA4 152 aa14.01□□□□□ -0.17
PDLIM2-215ENST00000456545 ASPHD1Q5U4P2 390 aa14.01□□□□□ -0.17
PDLIM2-215ENST00000456545 SLC25A42Q86VD7 318 aa14.01□□□□□ -0.17
PDLIM2-215ENST00000456545 PUSL1Q8N0Z8 303 aaKnown RBP14.01□□□□□ -0.17
PDLIM2-215ENST00000456545 OR4A5Q8NH83 315 aa14.01□□□□□ -0.17
PDLIM2-215ENST00000456545 MRAPQ8TCY5 172 aa14.01□□□□□ -0.17
PDLIM2-215ENST00000456545 TINAGL1Q9GZM7 467 aaPredicted RBP14.01□□□□□ -0.17
PDLIM2-215ENST00000456545 FXYD6Q9H0Q3 95 aa14.01□□□□□ -0.17
PDLIM2-215ENST00000456545 PLEKHA2Q9HB19 425 aa14.01□□□□□ -0.17
PDLIM2-215ENST00000456545 AURKAIP1Q9NWT8 199 aaPredicted RBP14.01□□□□□ -0.17
PDLIM2-215ENST00000456545 MTFP1Q9UDX5 166 aa14.01□□□□□ -0.17
PDLIM2-215ENST00000456545 MEGF8Q7Z7M0 2845 aa14□□□□□ -0.17
PDLIM2-215ENST00000456545 H3BMQ9 156 aa14□□□□□ -0.17
PDLIM2-215ENST00000456545 GABARAPH6UMI1 98 aa14□□□□□ -0.17
PDLIM2-215ENST00000456545 PGAM2P15259 253 aa14□□□□□ -0.17
PDLIM2-215ENST00000456545 F2RP25116 425 aa14□□□□□ -0.17
PDLIM2-215ENST00000456545 LPAR6P43657 344 aa14□□□□□ -0.17
PDLIM2-215ENST00000456545 RPL8P62917 257 aaKnown RBP14□□□□□ -0.17
PDLIM2-215ENST00000456545 MRPS10P82664 201 aaKnown RBP14□□□□□ -0.17
PDLIM2-215ENST00000456545 FHL3Q13643 280 aa14□□□□□ -0.17
PDLIM2-215ENST00000456545 VAX1Q5SQQ9 334 aa14□□□□□ -0.17
PDLIM2-215ENST00000456545 C10orf55Q5SWW7 151 aa14□□□□□ -0.17
PDLIM2-215ENST00000456545 OR4A47Q6IF82 309 aa14□□□□□ -0.17
PDLIM2-215ENST00000456545 SLC38A6Q8IZM9 456 aa14□□□□□ -0.17
PDLIM2-215ENST00000456545 DGCR14Q96DF8 476 aaKnown RBP14□□□□□ -0.17
PDLIM2-215ENST00000456545 BET1LQ9NYM9 111 aa14□□□□□ -0.17
PDLIM2-215ENST00000456545 RABL2AQ9UBK7 228 aaPredicted RBP14□□□□□ -0.17
PDLIM2-215ENST00000456545 RABL2BQ9UNT1 228 aa14□□□□□ -0.17
PDLIM2-215ENST00000456545 IGHV4OR15-8A0A075B7B6 117 aa13.99□□□□□ -0.17
PDLIM2-215ENST00000456545 A0A087WW49 117 aa13.99□□□□□ -0.17
PDLIM2-215ENST00000456545 ANKRD34BA5PLL1 514 aa13.99□□□□□ -0.17
PDLIM2-215ENST00000456545 OVOL1O14753 267 aa13.99□□□□□ -0.17
PDLIM2-215ENST00000456545 S1PR2O95136 353 aa13.99□□□□□ -0.17
PDLIM2-215ENST00000456545 CD3DP04234 171 aa13.99□□□□□ -0.17
PDLIM2-215ENST00000456545 RPA2P15927 270 aa13.99□□□□□ -0.17
PDLIM2-215ENST00000456545 TBPP20226 339 aa13.99□□□□□ -0.17
PDLIM2-215ENST00000456545 TAS2R19P59542 299 aa13.99□□□□□ -0.17
PDLIM2-215ENST00000456545 TMEM229BQ8NBD8 167 aa13.99□□□□□ -0.17
PDLIM2-215ENST00000456545 MCFD2Q8NI22 146 aa13.99□□□□□ -0.17
PDLIM2-215ENST00000456545 DCUN1D4Q92564 292 aa13.99□□□□□ -0.17
PDLIM2-215ENST00000456545 USMG5Q96IX5 58 aa13.99□□□□□ -0.17
PDLIM2-215ENST00000456545 RANGRFQ9HD47 186 aaPredicted RBP13.99□□□□□ -0.17
PDLIM2-215ENST00000456545 NOTCH1P46531 2555 aa13.99□□□□□ -0.17
PDLIM2-215ENST00000456545 HMX3A6NHT5 357 aa13.98□□□□□ -0.17
PDLIM2-215ENST00000456545 HLA-GP17693 338 aa13.98□□□□□ -0.17
PDLIM2-215ENST00000456545 SLURP1P55000 103 aa13.98□□□□□ -0.17
PDLIM2-215ENST00000456545 UCP3P55916 312 aa13.98□□□□□ -0.17
PDLIM2-215ENST00000456545 DGCR2P98153 550 aa13.98□□□□□ -0.17
PDLIM2-215ENST00000456545 DEFB121Q5J5C9 76 aa13.98□□□□□ -0.17
PDLIM2-215ENST00000456545 TTC9CQ8N5M4 171 aa13.98□□□□□ -0.17
PDLIM2-215ENST00000456545 ADAD2Q8NCV1 583 aaKnown RBP13.98□□□□□ -0.17
PDLIM2-215ENST00000456545 RSRP1Q9BUV0 290 aa13.98□□□□□ -0.17
PDLIM2-215ENST00000456545 COMMD5Q9GZQ3 224 aa13.98□□□□□ -0.17
PDLIM2-215ENST00000456545 COMMD9Q9P000 198 aa13.98□□□□□ -0.17
PDLIM2-215ENST00000456545 CEPT1Q9Y6K0 416 aa13.98□□□□□ -0.17
PDLIM2-215ENST00000456545 UPK2O00526 184 aa13.97□□□□□ -0.17
PDLIM2-215ENST00000456545 BRI3O95415 125 aa13.97□□□□□ -0.17
PDLIM2-215ENST00000456545 RAB3DO95716 219 aa13.97□□□□□ -0.17
PDLIM2-215ENST00000456545 DHFRP00374 187 aa13.97□□□□□ -0.17
PDLIM2-215ENST00000456545 SSBP1Q04837 148 aaKnown RBP13.97□□□□□ -0.17
PDLIM2-215ENST00000456545 ATP5G2Q06055 141 aa13.97□□□□□ -0.17
PDLIM2-215ENST00000456545 SCGB2B2Q4G0G5 96 aa13.97□□□□□ -0.17
PDLIM2-215ENST00000456545 TBC1D26Q86UD7 250 aa13.97□□□□□ -0.17
PDLIM2-215ENST00000456545 ARRDC1Q8N5I2 433 aa13.97□□□□□ -0.17
PDLIM2-215ENST00000456545 DLX4Q92988 240 aaPredicted RBP13.97□□□□□ -0.17
PDLIM2-215ENST00000456545 TMEM140Q9NV12 185 aa13.97□□□□□ -0.17
PDLIM2-215ENST00000456545 FABP12A6NFH5 140 aa13.96□□□□□ -0.17
PDLIM2-215ENST00000456545 SNAPC5O75971 98 aa13.96□□□□□ -0.17
PDLIM2-215ENST00000456545 KRASP01116 189 aa13.96□□□□□ -0.17
PDLIM2-215ENST00000456545 PRH1P02810 166 aa13.96□□□□□ -0.17
PDLIM2-215ENST00000456545 DEFA4P12838 97 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms