RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 OR1A1Q9P1Q5 309 aa8.37□□□□□ -1.07
CHCHD4P3-201ENST00000455954 KCNS2Q9ULS6 477 aa8.37□□□□□ -1.07
CHCHD4P3-201ENST00000455954 POLDIP2Q9Y2S7 368 aa8.37□□□□□ -1.07
CHCHD4P3-201ENST00000455954 HECTD1Q9ULT8 2610 aa8.36□□□□□ -1.07
CHCHD4P3-201ENST00000455954 LRRK2Q5S007 2527 aa8.36□□□□□ -1.07
CHCHD4P3-201ENST00000455954 PTPN13Q12923 2485 aa8.36□□□□□ -1.07
CHCHD4P3-201ENST00000455954 SAA2-SAA4A0A096LPE2 208 aa8.36□□□□□ -1.07
CHCHD4P3-201ENST00000455954 ZNF705FA8MVS1 300 aaPredicted RBP8.36□□□□□ -1.07
CHCHD4P3-201ENST00000455954 C9JCJ5 164 aa8.36□□□□□ -1.07
CHCHD4P3-201ENST00000455954 LILRA1O75019 489 aa8.36□□□□□ -1.07
CHCHD4P3-201ENST00000455954 MRPL33O75394 65 aaKnown RBP8.36□□□□□ -1.07
CHCHD4P3-201ENST00000455954 HPRT1P00492 218 aa8.36□□□□□ -1.07
CHCHD4P3-201ENST00000455954 MT-ND6P03923 174 aa8.36□□□□□ -1.07
CHCHD4P3-201ENST00000455954 ZNF705DP0CH99 300 aaPredicted RBP8.36□□□□□ -1.07
CHCHD4P3-201ENST00000455954 ZNF705BP0CI00 300 aaPredicted RBP8.36□□□□□ -1.07
CHCHD4P3-201ENST00000455954 ZNF25P17030 456 aaPredicted RBP8.36□□□□□ -1.07
CHCHD4P3-201ENST00000455954 GDF1P27539 372 aa8.36□□□□□ -1.07
CHCHD4P3-201ENST00000455954 OPRK1P41145 380 aa8.36□□□□□ -1.07
CHCHD4P3-201ENST00000455954 PRSS12P56730 875 aa8.36□□□□□ -1.07
CHCHD4P3-201ENST00000455954 GNB1P62873 340 aa8.36□□□□□ -1.07
CHCHD4P3-201ENST00000455954 PLP2Q04941 152 aa8.36□□□□□ -1.07
CHCHD4P3-201ENST00000455954 ZNF146Q15072 292 aa8.36□□□□□ -1.07
CHCHD4P3-201ENST00000455954 OR8G2PQ6IF36 304 aa8.36□□□□□ -1.07
CHCHD4P3-201ENST00000455954 OR4B1Q8NGF8 309 aa8.36□□□□□ -1.07
CHCHD4P3-201ENST00000455954 DTD1Q8TEA8 209 aa8.36□□□□□ -1.07
CHCHD4P3-201ENST00000455954 C11orf52Q96A22 123 aa8.36□□□□□ -1.07
CHCHD4P3-201ENST00000455954 SFRP2Q96HF1 295 aa8.36□□□□□ -1.07
CHCHD4P3-201ENST00000455954 POM121L2Q96KW2 1035 aa8.36□□□□□ -1.07
CHCHD4P3-201ENST00000455954 HS3ST6Q96QI5 342 aa8.36□□□□□ -1.07
CHCHD4P3-201ENST00000455954 TBX15Q96SF7 602 aa8.36□□□□□ -1.07
CHCHD4P3-201ENST00000455954 IL36BQ9NZH7 164 aa8.36□□□□□ -1.07
CHCHD4P3-201ENST00000455954 IL36RNQ9UBH0 155 aa8.36□□□□□ -1.07
CHCHD4P3-201ENST00000455954 PPP1R3CQ9UQK1 317 aa8.36□□□□□ -1.07
CHCHD4P3-201ENST00000455954 GOLT1BQ9Y3E0 138 aa8.36□□□□□ -1.07
CHCHD4P3-201ENST00000455954 RBM7Q9Y580 266 aaKnown RBP8.36□□□□□ -1.07
CHCHD4P3-201ENST00000455954 ICE1Q9Y2F5 2266 aa8.36□□□□□ -1.07
CHCHD4P3-201ENST00000455954 TMEM30CPA0ZSE6 113 aa8.35□□□□□ -1.07
CHCHD4P3-201ENST00000455954 ODAMA1E959 279 aa8.35□□□□□ -1.07
CHCHD4P3-201ENST00000455954 C5orf49A4QMS7 147 aa8.35□□□□□ -1.07
CHCHD4P3-201ENST00000455954 WDR1O75083 606 aa8.35□□□□□ -1.07
CHCHD4P3-201ENST00000455954 TRAPPC6AO75865 159 aa8.35□□□□□ -1.07
CHCHD4P3-201ENST00000455954 REG1AP05451 166 aa8.35□□□□□ -1.07
CHCHD4P3-201ENST00000455954 RAC2P15153 192 aa8.35□□□□□ -1.07
CHCHD4P3-201ENST00000455954 KITLGP21583 273 aa8.35□□□□□ -1.07
CHCHD4P3-201ENST00000455954 NPPCP23582 126 aa8.35□□□□□ -1.07
CHCHD4P3-201ENST00000455954 GFRA1P56159 465 aa8.35□□□□□ -1.07
CHCHD4P3-201ENST00000455954 ERVK11-1P61568 191 aa8.35□□□□□ -1.07
CHCHD4P3-201ENST00000455954 GABRA6Q16445 453 aa8.35□□□□□ -1.07
CHCHD4P3-201ENST00000455954 IZUMO4Q1ZYL8 232 aa8.35□□□□□ -1.07
CHCHD4P3-201ENST00000455954 YRDCQ86U90 279 aaKnown RBP8.35□□□□□ -1.07
CHCHD4P3-201ENST00000455954 OR10G8Q8NGN5 311 aa8.35□□□□□ -1.07
CHCHD4P3-201ENST00000455954 RND1Q92730 232 aa8.35□□□□□ -1.07
CHCHD4P3-201ENST00000455954 RDH5Q92781 318 aa8.35□□□□□ -1.07
CHCHD4P3-201ENST00000455954 SPRR3Q9UBC9 169 aa8.35□□□□□ -1.07
CHCHD4P3-201ENST00000455954 TRAPPC2LQ9UL33 140 aa8.35□□□□□ -1.07
CHCHD4P3-201ENST00000455954 USP9YO00507 2555 aaPredicted RBP8.35□□□□□ -1.07
CHCHD4P3-201ENST00000455954 DOPEY1Q5JWR5 2465 aa8.34□□□□□ -1.07
CHCHD4P3-201ENST00000455954 HSPB6O14558 160 aa8.34□□□□□ -1.07
CHCHD4P3-201ENST00000455954 SH2D1BO14796 132 aa8.34□□□□□ -1.07
CHCHD4P3-201ENST00000455954 NXPH2O95156 264 aa8.34□□□□□ -1.07
CHCHD4P3-201ENST00000455954 CXorf1O96002 111 aa8.34□□□□□ -1.07
CHCHD4P3-201ENST00000455954 MT-CO2P00403 227 aa8.34□□□□□ -1.07
CHCHD4P3-201ENST00000455954 STAG3L2P0CL84 134 aa8.34□□□□□ -1.07
CHCHD4P3-201ENST00000455954 STAG3L3P0CL85 134 aa8.34□□□□□ -1.07
CHCHD4P3-201ENST00000455954 AREGP15514 252 aa8.34□□□□□ -1.07
CHCHD4P3-201ENST00000455954 ZNF16P17020 682 aaPredicted RBP8.34□□□□□ -1.07
CHCHD4P3-201ENST00000455954 GRNP28799 593 aaKnown RBP8.34□□□□□ -1.07
CHCHD4P3-201ENST00000455954 GCH1P30793 250 aa8.34□□□□□ -1.07
CHCHD4P3-201ENST00000455954 ADMP35318 185 aa8.34□□□□□ -1.07
CHCHD4P3-201ENST00000455954 TIMP3P35625 211 aa8.34□□□□□ -1.07
CHCHD4P3-201ENST00000455954 CHRNA7P36544 502 aa8.34□□□□□ -1.07
CHCHD4P3-201ENST00000455954 TFF3Q07654 80 aa8.34□□□□□ -1.07
CHCHD4P3-201ENST00000455954 CDSNQ15517 529 aa8.34□□□□□ -1.07
CHCHD4P3-201ENST00000455954 PDLIM3Q53GG5 364 aaPredicted RBP8.34□□□□□ -1.07
CHCHD4P3-201ENST00000455954 TPTE2P1Q5T6R2 138 aa8.34□□□□□ -1.07
CHCHD4P3-201ENST00000455954 SLC35E4Q6ICL7 350 aa8.34□□□□□ -1.07
CHCHD4P3-201ENST00000455954 WDR73Q6P4I2 378 aa8.34□□□□□ -1.07
CHCHD4P3-201ENST00000455954 TRAT1Q6PIZ9 186 aa8.34□□□□□ -1.07
CHCHD4P3-201ENST00000455954 RPRMLQ8N4K4 120 aa8.34□□□□□ -1.07
CHCHD4P3-201ENST00000455954 OR1K1Q8NGR3 316 aa8.34□□□□□ -1.07
CHCHD4P3-201ENST00000455954 OR52E5Q8NH55 327 aa8.34□□□□□ -1.07
CHCHD4P3-201ENST00000455954 NANOS1Q8WY41 292 aaKnown RBP8.34□□□□□ -1.07
CHCHD4P3-201ENST00000455954 TMEM208Q9BTX3 173 aa8.34□□□□□ -1.07
CHCHD4P3-201ENST00000455954 VAMP8Q9BV40 100 aa8.34□□□□□ -1.07
CHCHD4P3-201ENST00000455954 CRIM1Q9NZV1 1036 aa8.34□□□□□ -1.07
CHCHD4P3-201ENST00000455954 SETXQ7Z333 2677 aaKnown RBP8.34□□□□□ -1.07
CHCHD4P3-201ENST00000455954 ARHGAP21Q5T5U3 1957 aa8.33□□□□□ -1.08
CHCHD4P3-201ENST00000455954 GTF3C1Q12789 2109 aa8.33□□□□□ -1.08
CHCHD4P3-201ENST00000455954 A0A1W2PPV4 95 aa8.33□□□□□ -1.08
CHCHD4P3-201ENST00000455954 A8MXE2 369 aa8.33□□□□□ -1.08
CHCHD4P3-201ENST00000455954 CDIPTO14735 213 aa8.33□□□□□ -1.08
CHCHD4P3-201ENST00000455954 IL6RP08887 468 aaPredicted RBP8.33□□□□□ -1.08
CHCHD4P3-201ENST00000455954 OR10J4P0C629 311 aa8.33□□□□□ -1.08
CHCHD4P3-201ENST00000455954 CRISP2P16562 243 aa8.33□□□□□ -1.08
CHCHD4P3-201ENST00000455954 G0S2P27469 103 aa8.33□□□□□ -1.08
CHCHD4P3-201ENST00000455954 CHRNB4P30926 498 aa8.33□□□□□ -1.08
CHCHD4P3-201ENST00000455954 RPL29P47914 159 aaKnown RBP8.33□□□□□ -1.08
CHCHD4P3-201ENST00000455954 LHX2P50458 406 aa8.33□□□□□ -1.08
CHCHD4P3-201ENST00000455954 TGFBR3Q03167 851 aa8.33□□□□□ -1.08
CHCHD4P3-201ENST00000455954 COL5A1-AS1Q5SY13 56 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms