RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 ZNF818PQ6ZRF7 136 aa16.28■□□□□ 0.2
HMGB3-205ENST00000455596 SSX9Q7RTT3 188 aa16.28■□□□□ 0.2
HMGB3-205ENST00000455596 FAM223AQ8IWN6 122 aa16.28■□□□□ 0.2
HMGB3-205ENST00000455596 OR5H2Q8NGV7 314 aa16.28■□□□□ 0.2
HMGB3-205ENST00000455596 TRBV9A0A0B4J1U6 114 aa16.27■□□□□ 0.2
HMGB3-205ENST00000455596 SMIM31A0A1B0GVY4 71 aa16.27■□□□□ 0.2
HMGB3-205ENST00000455596 HMX3A6NHT5 357 aa16.27■□□□□ 0.2
HMGB3-205ENST00000455596 SULT1C2O00338 296 aa16.27■□□□□ 0.2
HMGB3-205ENST00000455596 APOA1P02647 267 aa16.27■□□□□ 0.2
HMGB3-205ENST00000455596 PMP2P02689 132 aa16.27■□□□□ 0.2
HMGB3-205ENST00000455596 PRH1P02810 166 aa16.27■□□□□ 0.2
HMGB3-205ENST00000455596 RFX2P48378 723 aa16.27■□□□□ 0.2
HMGB3-205ENST00000455596 RHOGP84095 191 aa16.27■□□□□ 0.2
HMGB3-205ENST00000455596 KLF5Q13887 457 aaPredicted RBP16.27■□□□□ 0.2
HMGB3-205ENST00000455596 OR4A5Q8NH83 315 aa16.27■□□□□ 0.2
HMGB3-205ENST00000455596 ZNF2Q9BSG1 426 aaPredicted RBP16.27■□□□□ 0.2
HMGB3-205ENST00000455596 AKIP1Q9NQ31 210 aa16.27■□□□□ 0.2
HMGB3-205ENST00000455596 BET1LQ9NYM9 111 aa16.27■□□□□ 0.2
HMGB3-205ENST00000455596 RBMXL2O75526 392 aaKnown RBP16.26■□□□□ 0.19
HMGB3-205ENST00000455596 HPRT1P00492 218 aa16.26■□□□□ 0.19
HMGB3-205ENST00000455596 SMIM18P0DKX4 95 aa16.26■□□□□ 0.19
HMGB3-205ENST00000455596 GP9P14770 177 aa16.26■□□□□ 0.19
HMGB3-205ENST00000455596 RORCP51449 518 aa16.26■□□□□ 0.19
HMGB3-205ENST00000455596 ZNF45Q02386 682 aa16.26■□□□□ 0.19
HMGB3-205ENST00000455596 ATP5G2Q06055 141 aa16.26■□□□□ 0.19
HMGB3-205ENST00000455596 OR51H1Q8NH63 302 aa16.26■□□□□ 0.19
HMGB3-205ENST00000455596 MOB3AQ96BX8 217 aa16.26■□□□□ 0.19
HMGB3-205ENST00000455596 FYTTD1Q96QD9 318 aaKnown RBP16.26■□□□□ 0.19
HMGB3-205ENST00000455596 RSRP1Q9BUV0 290 aa16.26■□□□□ 0.19
HMGB3-205ENST00000455596 ZNF257Q9Y2Q1 563 aa16.26■□□□□ 0.19
HMGB3-205ENST00000455596 SMAD5-AS1Q9Y6J3 95 aa16.26■□□□□ 0.19
HMGB3-205ENST00000455596 DPPA5A6NC42 116 aa16.25■□□□□ 0.19
HMGB3-205ENST00000455596 TEX22C9J3V5 150 aa16.25■□□□□ 0.19
HMGB3-205ENST00000455596 TRBV12-3P01733 135 aa16.25■□□□□ 0.19
HMGB3-205ENST00000455596 ZNF735P0CB33 412 aa16.25■□□□□ 0.19
HMGB3-205ENST00000455596 NHLRC4P0CG21 123 aaPredicted RBP16.25■□□□□ 0.19
HMGB3-205ENST00000455596 GNRHRP30968 328 aa16.25■□□□□ 0.19
HMGB3-205ENST00000455596 TAS2R31P59538 309 aa16.25■□□□□ 0.19
HMGB3-205ENST00000455596 RPL8P62917 257 aaKnown RBP16.25■□□□□ 0.19
HMGB3-205ENST00000455596 EXOSC2Q13868 293 aaKnown RBP16.25■□□□□ 0.19
HMGB3-205ENST00000455596 TATDN3Q17R31 274 aa16.25■□□□□ 0.19
HMGB3-205ENST00000455596 RPEL1Q2QD12 228 aa16.25■□□□□ 0.19
HMGB3-205ENST00000455596 AADACL3Q5VUY0 350 aa16.25■□□□□ 0.19
HMGB3-205ENST00000455596 OR4A47Q6IF82 309 aa16.25■□□□□ 0.19
HMGB3-205ENST00000455596 ANKRD13BQ86YJ7 626 aa16.25■□□□□ 0.19
HMGB3-205ENST00000455596 NECAP1Q8NC96 275 aa16.25■□□□□ 0.19
HMGB3-205ENST00000455596 OR9G4Q8NGQ1 327 aa16.25■□□□□ 0.19
HMGB3-205ENST00000455596 CD300LFQ8TDQ1 290 aa16.25■□□□□ 0.19
HMGB3-205ENST00000455596 HRASLSQ9HDD0 168 aa16.25■□□□□ 0.19
HMGB3-205ENST00000455596 SLC2A9Q9NRM0 540 aa16.25■□□□□ 0.19
HMGB3-205ENST00000455596 ADAM30Q9UKF2 790 aa16.25■□□□□ 0.19
HMGB3-205ENST00000455596 NPIPB5A8MRT5 1133 aa16.24■□□□□ 0.19
HMGB3-205ENST00000455596 E7EUB6 86 aa16.24■□□□□ 0.19
HMGB3-205ENST00000455596 IL6RP08887 468 aaPredicted RBP16.24■□□□□ 0.19
HMGB3-205ENST00000455596 NQO2P16083 231 aa16.24■□□□□ 0.19
HMGB3-205ENST00000455596 SYNJ2BPP57105 145 aa16.24■□□□□ 0.19
HMGB3-205ENST00000455596 GPX8Q8TED1 209 aa16.24■□□□□ 0.19
HMGB3-205ENST00000455596 HPGDSO60760 199 aa16.23■□□□□ 0.19
HMGB3-205ENST00000455596 OR2J3O76001 311 aa16.23■□□□□ 0.19
HMGB3-205ENST00000455596 GABARAPO95166 117 aa16.23■□□□□ 0.19
HMGB3-205ENST00000455596 IGLV1-51P01701 117 aa16.23■□□□□ 0.19
HMGB3-205ENST00000455596 HLA-GP17693 338 aa16.23■□□□□ 0.19
HMGB3-205ENST00000455596 ELK1P19419 428 aa16.23■□□□□ 0.19
HMGB3-205ENST00000455596 HLA-DMAP28067 261 aa16.23■□□□□ 0.19
HMGB3-205ENST00000455596 HRH1P35367 487 aa16.23■□□□□ 0.19
HMGB3-205ENST00000455596 POU2AF1Q16633 256 aa16.23■□□□□ 0.19
HMGB3-205ENST00000455596 MZT2AQ6P582 158 aa16.23■□□□□ 0.19
HMGB3-205ENST00000455596 HAPLN4Q86UW8 402 aa16.23■□□□□ 0.19
HMGB3-205ENST00000455596 SNX29P2Q8IUI4 249 aa16.23■□□□□ 0.19
HMGB3-205ENST00000455596 LYSMD2Q8IV50 215 aa16.23■□□□□ 0.19
HMGB3-205ENST00000455596 OR6F1Q8NGZ6 308 aa16.23■□□□□ 0.19
HMGB3-205ENST00000455596 NAA50Q9GZZ1 169 aaKnown RBP16.23■□□□□ 0.19
HMGB3-205ENST00000455596 PLEKHA2Q9HB19 425 aa16.23■□□□□ 0.19
HMGB3-205ENST00000455596 SCPEP1Q9HB40 452 aa16.23■□□□□ 0.19
HMGB3-205ENST00000455596 A0A1B0GW64 132 aa16.22■□□□□ 0.19
HMGB3-205ENST00000455596 CTF1Q16619 201 aa16.22■□□□□ 0.19
HMGB3-205ENST00000455596 C15orf32Q32M92 178 aa16.22■□□□□ 0.19
HMGB3-205ENST00000455596 FAM209BQ5JX69 171 aa16.22■□□□□ 0.19
HMGB3-205ENST00000455596 DMBX1Q8NFW5 382 aa16.22■□□□□ 0.19
HMGB3-205ENST00000455596 AP3S1Q92572 193 aa16.22■□□□□ 0.19
HMGB3-205ENST00000455596 COMMD9Q9P000 198 aa16.22■□□□□ 0.19
HMGB3-205ENST00000455596 COL7A1Q02388 2944 aa16.22■□□□□ 0.19
HMGB3-205ENST00000455596 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.21■□□□□ 0.19
HMGB3-205ENST00000455596 FAM25AB3EWG3 89 aa16.21■□□□□ 0.19
HMGB3-205ENST00000455596 FAM25CB3EWG5 89 aa16.21■□□□□ 0.19
HMGB3-205ENST00000455596 FAM25GB3EWG6 89 aa16.21■□□□□ 0.19
HMGB3-205ENST00000455596 PGLYRP1O75594 196 aaPredicted RBP16.21■□□□□ 0.19
HMGB3-205ENST00000455596 S1PR2O95136 353 aa16.21■□□□□ 0.19
HMGB3-205ENST00000455596 DHFRP00374 187 aa16.21■□□□□ 0.19
HMGB3-205ENST00000455596 RLN1P04808 185 aa16.21■□□□□ 0.19
HMGB3-205ENST00000455596 MYOD1P15172 320 aa16.21■□□□□ 0.19
HMGB3-205ENST00000455596 AREGP15514 252 aa16.21■□□□□ 0.19
HMGB3-205ENST00000455596 PSMB6P28072 239 aa16.21■□□□□ 0.19
HMGB3-205ENST00000455596 GPR107Q5VW38 600 aa16.21■□□□□ 0.19
HMGB3-205ENST00000455596 CMTM1Q8IZ96 169 aa16.21■□□□□ 0.19
HMGB3-205ENST00000455596 MRPS26Q9BYN8 205 aaKnown RBP16.21■□□□□ 0.19
HMGB3-205ENST00000455596 FXYD6Q9H0Q3 95 aa16.21■□□□□ 0.19
HMGB3-205ENST00000455596 TMEM140Q9NV12 185 aa16.21■□□□□ 0.19
HMGB3-205ENST00000455596 FBXL7Q9UJT9 491 aa16.21■□□□□ 0.19
HMGB3-205ENST00000455596 BMPR1BO00238 502 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms