RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 HOXB5P09067 269 aa13.21□□□□□ -0.29
CCDC90B-202ENST00000455220 C5orf64Q2M2E5 130 aa13.21□□□□□ -0.29
CCDC90B-202ENST00000455220 GGNBP1Q5YKI7 109 aa13.21□□□□□ -0.29
CCDC90B-202ENST00000455220 H2BFWTQ7Z2G1 175 aa13.21□□□□□ -0.29
CCDC90B-202ENST00000455220 UXS1Q8NBZ7 420 aa13.21□□□□□ -0.29
CCDC90B-202ENST00000455220 OR4A5Q8NH83 315 aa13.21□□□□□ -0.29
CCDC90B-202ENST00000455220 TMEM167AQ8TBQ9 72 aa13.21□□□□□ -0.29
CCDC90B-202ENST00000455220 ZNF418Q8TF45 676 aaPredicted RBP13.21□□□□□ -0.29
CCDC90B-202ENST00000455220 ESM1Q9NQ30 184 aa13.21□□□□□ -0.29
CCDC90B-202ENST00000455220 KIAA1456Q9P272 454 aa13.21□□□□□ -0.29
CCDC90B-202ENST00000455220 SIGLEC9Q9Y336 463 aa13.21□□□□□ -0.29
CCDC90B-202ENST00000455220 DNAJC9-AS1A6NH13 148 aa13.2□□□□□ -0.3
CCDC90B-202ENST00000455220 CHST1O43916 411 aa13.2□□□□□ -0.3
CCDC90B-202ENST00000455220 FGF2P09038 288 aa13.2□□□□□ -0.3
CCDC90B-202ENST00000455220 OR9G9P0C7N8 305 aa13.2□□□□□ -0.3
CCDC90B-202ENST00000455220 HILS1P60008 231 aa13.2□□□□□ -0.3
CCDC90B-202ENST00000455220 MRGPRG-AS1Q2M3A8 158 aa13.2□□□□□ -0.3
CCDC90B-202ENST00000455220 C2orf68Q2NKX9 166 aa13.2□□□□□ -0.3
CCDC90B-202ENST00000455220 C5orf56Q8N8D9 126 aa13.2□□□□□ -0.3
CCDC90B-202ENST00000455220 RNASE11Q8TAA1 199 aaKnown RBP13.2□□□□□ -0.3
CCDC90B-202ENST00000455220 GPR146Q96CH1 333 aa13.2□□□□□ -0.3
CCDC90B-202ENST00000455220 FBXL15Q9H469 300 aa13.2□□□□□ -0.3
CCDC90B-202ENST00000455220 TPSG1Q9NRR2 321 aa13.2□□□□□ -0.3
CCDC90B-202ENST00000455220 METTL1Q9UBP6 276 aaKnown RBP13.2□□□□□ -0.3
CCDC90B-202ENST00000455220 C2CD3Q4AC94 2353 aa13.2□□□□□ -0.3
CCDC90B-202ENST00000455220 NCBP2LA6PVI3 153 aaKnown RBP13.2□□□□□ -0.3
CCDC90B-202ENST00000455220 M0QZK8 103 aa13.2□□□□□ -0.3
CCDC90B-202ENST00000455220 UPK2O00526 184 aa13.2□□□□□ -0.3
CCDC90B-202ENST00000455220 IFNA21P01568 189 aa13.2□□□□□ -0.3
CCDC90B-202ENST00000455220 SLC25A6P12236 298 aa13.2□□□□□ -0.3
CCDC90B-202ENST00000455220 RRAS2P62070 204 aaPredicted RBP13.2□□□□□ -0.3
CCDC90B-202ENST00000455220 RELBQ01201 579 aa13.2□□□□□ -0.3
CCDC90B-202ENST00000455220 IZUMO4Q1ZYL8 232 aa13.2□□□□□ -0.3
CCDC90B-202ENST00000455220 Q6ZRM9 215 aa13.2□□□□□ -0.3
CCDC90B-202ENST00000455220 PPP1R27Q86WC6 154 aa13.2□□□□□ -0.3
CCDC90B-202ENST00000455220 OR5M8Q8NGP6 311 aa13.2□□□□□ -0.3
CCDC90B-202ENST00000455220 CHIAQ9BZP6 476 aa13.2□□□□□ -0.3
CCDC90B-202ENST00000455220 PLXNB1O43157 2135 aa13.19□□□□□ -0.3
CCDC90B-202ENST00000455220 TRAV3A0A0B4J244 114 aa13.19□□□□□ -0.3
CCDC90B-202ENST00000455220 MPTX1A8MV57 137 aa13.19□□□□□ -0.3
CCDC90B-202ENST00000455220 AMY1AP04745 511 aa13.19□□□□□ -0.3
CCDC90B-202ENST00000455220 SULT1A3P0DMM9 295 aa13.19□□□□□ -0.3
CCDC90B-202ENST00000455220 SULT1A4P0DMN0 295 aa13.19□□□□□ -0.3
CCDC90B-202ENST00000455220 PRSS8Q16651 343 aa13.19□□□□□ -0.3
CCDC90B-202ENST00000455220 FOXRED2Q8IWF2 684 aa13.19□□□□□ -0.3
CCDC90B-202ENST00000455220 MED28Q9H204 178 aa13.19□□□□□ -0.3
CCDC90B-202ENST00000455220 COA4Q9NYJ1 87 aa13.19□□□□□ -0.3
CCDC90B-202ENST00000455220 A0A1B0GU03 582 aa13.18□□□□□ -0.3
CCDC90B-202ENST00000455220 A0A1B0GVG6 124 aa13.18□□□□□ -0.3
CCDC90B-202ENST00000455220 CCSO14618 274 aa13.18□□□□□ -0.3
CCDC90B-202ENST00000455220 GOSR2O14653 212 aa13.18□□□□□ -0.3
CCDC90B-202ENST00000455220 FCN2Q15485 313 aa13.18□□□□□ -0.3
CCDC90B-202ENST00000455220 AARDQ4LEZ3 155 aa13.18□□□□□ -0.3
CCDC90B-202ENST00000455220 MMD2Q8IY49 270 aa13.18□□□□□ -0.3
CCDC90B-202ENST00000455220 SPIN2AQ99865 258 aa13.18□□□□□ -0.3
CCDC90B-202ENST00000455220 SPIN2BQ9BPZ2 258 aa13.18□□□□□ -0.3
CCDC90B-202ENST00000455220 ZNF430Q9H8G1 570 aaPredicted RBP13.18□□□□□ -0.3
CCDC90B-202ENST00000455220 TNFRSF19Q9NS68 423 aa13.18□□□□□ -0.3
CCDC90B-202ENST00000455220 CACNG5Q9UF02 275 aa13.18□□□□□ -0.3
CCDC90B-202ENST00000455220 C15orf61A6NNL5 157 aa13.17□□□□□ -0.3
CCDC90B-202ENST00000455220 PITX3O75364 302 aa13.17□□□□□ -0.3
CCDC90B-202ENST00000455220 HLA-DRB1P01911 266 aa13.17□□□□□ -0.3
CCDC90B-202ENST00000455220 RPL8P62917 257 aaKnown RBP13.17□□□□□ -0.3
CCDC90B-202ENST00000455220 PJVKQ0ZLH3 352 aa13.17□□□□□ -0.3
CCDC90B-202ENST00000455220 SMCO1Q147U7 214 aa13.17□□□□□ -0.3
CCDC90B-202ENST00000455220 PLGLAQ15195 96 aa13.17□□□□□ -0.3
CCDC90B-202ENST00000455220 OR10C1Q96KK4 312 aa13.17□□□□□ -0.3
CCDC90B-202ENST00000455220 JMJD8Q96S16 334 aa13.17□□□□□ -0.3
CCDC90B-202ENST00000455220 RASL11BQ9BPW5 248 aa13.17□□□□□ -0.3
CCDC90B-202ENST00000455220 RANBP3Q9H6Z4 567 aaPredicted RBP13.17□□□□□ -0.3
CCDC90B-202ENST00000455220 TMEM14BQ9NUH8 114 aa13.17□□□□□ -0.3
CCDC90B-202ENST00000455220 MGAT4CQ9UBM8 478 aa13.17□□□□□ -0.3
CCDC90B-202ENST00000455220 NSG2Q9Y328 171 aa13.17□□□□□ -0.3
CCDC90B-202ENST00000455220 NIPBLQ6KC79 2804 aaeCLIP13.16□□□□□ -0.3
CCDC90B-202ENST00000455220 FCN1O00602 326 aa13.16□□□□□ -0.3
CCDC90B-202ENST00000455220 GPR137BO60478 399 aa13.16□□□□□ -0.3
CCDC90B-202ENST00000455220 SNAPC5O75971 98 aa13.16□□□□□ -0.3
CCDC90B-202ENST00000455220 RNASE1P07998 156 aaKnown RBP13.16□□□□□ -0.3
CCDC90B-202ENST00000455220 CXCL3P19876 107 aa13.16□□□□□ -0.3
CCDC90B-202ENST00000455220 SSBP2P81877 361 aaPredicted RBP13.16□□□□□ -0.3
CCDC90B-202ENST00000455220 ZNF429Q86V71 674 aa13.16□□□□□ -0.3
CCDC90B-202ENST00000455220 OR11H7Q8NGC8 314 aa13.16□□□□□ -0.3
CCDC90B-202ENST00000455220 OR4A16Q8NH70 328 aa13.16□□□□□ -0.3
CCDC90B-202ENST00000455220 DUX5Q96PT3 197 aa13.16□□□□□ -0.3
CCDC90B-202ENST00000455220 PRNDQ9UKY0 176 aa13.16□□□□□ -0.3
CCDC90B-202ENST00000455220 FOXA2Q9Y261 457 aaPredicted RBP13.16□□□□□ -0.3
CCDC90B-202ENST00000455220 CA2P00918 260 aa13.15□□□□□ -0.3
CCDC90B-202ENST00000455220 MAS1LP35410 378 aa13.15□□□□□ -0.3
CCDC90B-202ENST00000455220 H2BFSP57053 126 aa13.15□□□□□ -0.3
CCDC90B-202ENST00000455220 OR2B8PP59922 312 aa13.15□□□□□ -0.3
CCDC90B-202ENST00000455220 IAH1Q2TAA2 248 aaPredicted RBP13.15□□□□□ -0.3
CCDC90B-202ENST00000455220 THOC7Q6I9Y2 204 aaKnown RBP13.15□□□□□ -0.3
CCDC90B-202ENST00000455220 GSG1LQ6UXU4 331 aa13.15□□□□□ -0.3
CCDC90B-202ENST00000455220 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.15□□□□□ -0.3
CCDC90B-202ENST00000455220 TET2Q6N021 2002 aaPredicted RBP13.15□□□□□ -0.3
CCDC90B-202ENST00000455220 hCG_2014768A0A024R1R8 64 aa13.15□□□□□ -0.3
CCDC90B-202ENST00000455220 C13orf42A0A1B0GVH6 325 aa13.15□□□□□ -0.3
CCDC90B-202ENST00000455220 C5orf51A6NDU8 294 aa13.15□□□□□ -0.3
CCDC90B-202ENST00000455220 HMX3A6NHT5 357 aa13.15□□□□□ -0.3
CCDC90B-202ENST00000455220 FAM25EA8MYX2 175 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms