RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 ALKAL2Q6UX46 152 aa5.56□□□□□ -1.52
ECHDC1-210ENST00000454859 THNSL2Q86YJ6 484 aa5.56□□□□□ -1.52
ECHDC1-210ENST00000454859 OR5C1Q8NGR4 320 aa5.56□□□□□ -1.52
ECHDC1-210ENST00000454859 MMP26Q9NRE1 261 aa5.56□□□□□ -1.52
ECHDC1-210ENST00000454859 BEX4Q9NWD9 120 aaPredicted RBP5.56□□□□□ -1.52
ECHDC1-210ENST00000454859 NUP50Q9UKX7 468 aa5.56□□□□□ -1.52
ECHDC1-210ENST00000454859 SPTBN1Q01082 2364 aaKnown RBP5.56□□□□□ -1.52
ECHDC1-210ENST00000454859 DOPEY1Q5JWR5 2465 aa5.56□□□□□ -1.52
ECHDC1-210ENST00000454859 ABCA4P78363 2273 aa5.56□□□□□ -1.52
ECHDC1-210ENST00000454859 A0A1W2PPR1 153 aa5.56□□□□□ -1.52
ECHDC1-210ENST00000454859 FAM24AA6NFZ4 105 aa5.56□□□□□ -1.52
ECHDC1-210ENST00000454859 CEBPZOSA8MTT3 80 aa5.56□□□□□ -1.52
ECHDC1-210ENST00000454859 SHOXO15266 292 aa5.56□□□□□ -1.52
ECHDC1-210ENST00000454859 C1QL1O75973 258 aa5.56□□□□□ -1.52
ECHDC1-210ENST00000454859 TMEM50AO95807 157 aa5.56□□□□□ -1.52
ECHDC1-210ENST00000454859 IFNA17P01571 189 aa5.56□□□□□ -1.52
ECHDC1-210ENST00000454859 VDAC2P45880 294 aaPredicted RBP5.56□□□□□ -1.52
ECHDC1-210ENST00000454859 GNG10P50151 68 aa5.56□□□□□ -1.52
ECHDC1-210ENST00000454859 SUB1P53999 127 aaKnown RBP eCLIP5.56□□□□□ -1.52
ECHDC1-210ENST00000454859 BPIFB3P59826 476 aa5.56□□□□□ -1.52
ECHDC1-210ENST00000454859 OR2B8PP59922 312 aa5.56□□□□□ -1.52
ECHDC1-210ENST00000454859 LRRC75BQ2VPJ9 315 aa5.56□□□□□ -1.52
ECHDC1-210ENST00000454859 MMD2Q8IY49 270 aa5.56□□□□□ -1.52
ECHDC1-210ENST00000454859 ZNF295-AS1Q8N0V1 137 aa5.56□□□□□ -1.52
ECHDC1-210ENST00000454859 OR1L8Q8NGR8 309 aa5.56□□□□□ -1.52
ECHDC1-210ENST00000454859 CACNG8Q8WXS5 425 aa5.56□□□□□ -1.52
ECHDC1-210ENST00000454859 MARC2Q969Z3 335 aa5.56□□□□□ -1.52
ECHDC1-210ENST00000454859 MS4A7Q9GZW8 240 aaPredicted RBP5.56□□□□□ -1.52
ECHDC1-210ENST00000454859 FBXO7Q9Y3I1 522 aa5.56□□□□□ -1.52
ECHDC1-210ENST00000454859 INSIG2Q9Y5U4 225 aa5.56□□□□□ -1.52
ECHDC1-210ENST00000454859 BOD1L1Q8NFC6 3051 aa5.55□□□□□ -1.52
ECHDC1-210ENST00000454859 ROS1P08922 2347 aa5.55□□□□□ -1.52
ECHDC1-210ENST00000454859 NBEAQ8NFP9 2946 aa5.55□□□□□ -1.52
ECHDC1-210ENST00000454859 CHD6Q8TD26 2715 aa5.55□□□□□ -1.52
ECHDC1-210ENST00000454859 MFSD2BA6NFX1 497 aa5.55□□□□□ -1.52
ECHDC1-210ENST00000454859 C17orf112F2Z3M2 114 aa5.55□□□□□ -1.52
ECHDC1-210ENST00000454859 RBMXL2O75526 392 aaKnown RBP5.55□□□□□ -1.52
ECHDC1-210ENST00000454859 DYNLT3P51808 116 aa5.55□□□□□ -1.52
ECHDC1-210ENST00000454859 UBE2E1P51965 193 aa5.55□□□□□ -1.52
ECHDC1-210ENST00000454859 LMO4P61968 165 aa5.55□□□□□ -1.52
ECHDC1-210ENST00000454859 RPL8P62917 257 aaKnown RBP5.55□□□□□ -1.52
ECHDC1-210ENST00000454859 NHLH2Q02577 135 aa5.55□□□□□ -1.52
ECHDC1-210ENST00000454859 TMEM249Q2WGJ8 235 aa5.55□□□□□ -1.52
ECHDC1-210ENST00000454859 BSXQ3C1V8 233 aa5.55□□□□□ -1.52
ECHDC1-210ENST00000454859 TPTE2P1Q5T6R2 138 aa5.55□□□□□ -1.52
ECHDC1-210ENST00000454859 COMMD7Q86VX2 200 aa5.55□□□□□ -1.52
ECHDC1-210ENST00000454859 ZNF525Q8N782 197 aa5.55□□□□□ -1.52
ECHDC1-210ENST00000454859 OR1L6Q8NGR2 347 aa5.55□□□□□ -1.52
ECHDC1-210ENST00000454859 C10orf105Q8TEF2 133 aa5.55□□□□□ -1.52
ECHDC1-210ENST00000454859 TMEM190Q8WZ59 177 aa5.55□□□□□ -1.52
ECHDC1-210ENST00000454859 FAM168AQ92567 244 aa5.55□□□□□ -1.52
ECHDC1-210ENST00000454859 RPEQ96AT9 228 aa5.55□□□□□ -1.52
ECHDC1-210ENST00000454859 MALSU1Q96EH3 234 aa5.55□□□□□ -1.52
ECHDC1-210ENST00000454859 GPHA2Q96T91 129 aa5.55□□□□□ -1.52
ECHDC1-210ENST00000454859 MRPL20Q9BYC9 149 aaKnown RBP5.55□□□□□ -1.52
ECHDC1-210ENST00000454859 TCF19Q9Y242 345 aa5.55□□□□□ -1.52
ECHDC1-210ENST00000454859 MALRD1Q5VYJ5 2156 aa5.55□□□□□ -1.52
ECHDC1-210ENST00000454859 IGHV1-3A0A0C4DH29 117 aa5.54□□□□□ -1.52
ECHDC1-210ENST00000454859 C22orf46C9J442 243 aa5.54□□□□□ -1.52
ECHDC1-210ENST00000454859 CORTO00230 105 aa5.54□□□□□ -1.52
ECHDC1-210ENST00000454859 OR9G9P0C7N8 305 aa5.54□□□□□ -1.52
ECHDC1-210ENST00000454859 MDKP21741 143 aaPredicted RBP5.54□□□□□ -1.52
ECHDC1-210ENST00000454859 GPX4P36969 197 aaPredicted RBP5.54□□□□□ -1.52
ECHDC1-210ENST00000454859 ERHP84090 104 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-210ENST00000454859 SLC38A11Q08AI6 406 aa5.54□□□□□ -1.52
ECHDC1-210ENST00000454859 RAB31Q13636 194 aa5.54□□□□□ -1.52
ECHDC1-210ENST00000454859 EBI3Q14213 229 aa5.54□□□□□ -1.52
ECHDC1-210ENST00000454859 SSX2Q16385 188 aa5.54□□□□□ -1.52
ECHDC1-210ENST00000454859 C2orf83Q53S99 150 aa5.54□□□□□ -1.52
ECHDC1-210ENST00000454859 AVPI1Q5T686 147 aa5.54□□□□□ -1.52
ECHDC1-210ENST00000454859 Q8N7P7 452 aa5.54□□□□□ -1.52
ECHDC1-210ENST00000454859 ZNF114Q8NC26 417 aa5.54□□□□□ -1.52
ECHDC1-210ENST00000454859 OR4P4Q8NGL7 312 aa5.54□□□□□ -1.52
ECHDC1-210ENST00000454859 RNASEH2CQ8TDP1 164 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-210ENST00000454859 HARBI1Q96MB7 349 aa5.54□□□□□ -1.52
ECHDC1-210ENST00000454859 BBC3Q96PG8 261 aaPredicted RBP5.54□□□□□ -1.52
ECHDC1-210ENST00000454859 COMMD5Q9GZQ3 224 aa5.54□□□□□ -1.52
ECHDC1-210ENST00000454859 MAGT1Q9H0U3 335 aa5.54□□□□□ -1.52
ECHDC1-210ENST00000454859 SIRPDQ9H106 197 aa5.54□□□□□ -1.52
ECHDC1-210ENST00000454859 PLEKHA3Q9HB20 300 aa5.54□□□□□ -1.52
ECHDC1-210ENST00000454859 UQCC1Q9NVA1 299 aa5.54□□□□□ -1.52
ECHDC1-210ENST00000454859 OR51B2Q9Y5P1 312 aa5.54□□□□□ -1.52
ECHDC1-210ENST00000454859 FAM208BQ5VWN6 2430 aa5.54□□□□□ -1.52
ECHDC1-210ENST00000454859 PMS2P5A8MQ11 134 aa5.54□□□□□ -1.52
ECHDC1-210ENST00000454859 ZNF705EA8MWA4 302 aaPredicted RBP5.54□□□□□ -1.52
ECHDC1-210ENST00000454859 LYNX1G3V0Z9 82 aa5.54□□□□□ -1.52
ECHDC1-210ENST00000454859 IGHV4-39P01824 125 aa5.54□□□□□ -1.52
ECHDC1-210ENST00000454859 LYNX1P0DP58 116 aa5.54□□□□□ -1.52
ECHDC1-210ENST00000454859 SPANXN5Q5MJ07 72 aa5.54□□□□□ -1.52
ECHDC1-210ENST00000454859 PVRIGQ6DKI7 326 aa5.54□□□□□ -1.52
ECHDC1-210ENST00000454859 ETFRF1Q6IPR1 90 aa5.54□□□□□ -1.52
ECHDC1-210ENST00000454859 PRSS57Q6UWY2 283 aa5.54□□□□□ -1.52
ECHDC1-210ENST00000454859 LILRB2Q8N423 598 aa5.54□□□□□ -1.52
ECHDC1-210ENST00000454859 NPBQ8NG41 125 aa5.54□□□□□ -1.52
ECHDC1-210ENST00000454859 TMED6Q8WW62 240 aa5.54□□□□□ -1.52
ECHDC1-210ENST00000454859 MBD6Q96DN6 1003 aa5.54□□□□□ -1.52
ECHDC1-210ENST00000454859 RBMXL1Q96E39 390 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-210ENST00000454859 C19orf24Q9BVV8 132 aa5.54□□□□□ -1.52
ECHDC1-210ENST00000454859 QTRT1Q9BXR0 403 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-210ENST00000454859 WDR61Q9GZS3 305 aaKnown RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms