RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 PRDM13Q9H4Q3 707 aa9.42□□□□□ -0.9
DDR1-240ENST00000454612 A8MXE2 369 aa9.41□□□□□ -0.9
DDR1-240ENST00000454612 CD5P06127 495 aa9.41□□□□□ -0.9
DDR1-240ENST00000454612 FTH1P19P0C7X4 201 aa9.41□□□□□ -0.9
DDR1-240ENST00000454612 CD33P20138 364 aa9.41□□□□□ -0.9
DDR1-240ENST00000454612 GATA2P23769 480 aaPredicted RBP9.41□□□□□ -0.9
DDR1-240ENST00000454612 PRDX2P32119 198 aa9.41□□□□□ -0.9
DDR1-240ENST00000454612 FAM27E3Q08E93 113 aa9.41□□□□□ -0.9
DDR1-240ENST00000454612 OR2D3Q8NGH3 330 aa9.41□□□□□ -0.9
DDR1-240ENST00000454612 ITLN1Q8WWA0 313 aa9.41□□□□□ -0.9
DDR1-240ENST00000454612 ACTR3CQ9C0K3 210 aaPredicted RBP9.41□□□□□ -0.9
DDR1-240ENST00000454612 TUBA4BQ9H853 241 aa9.41□□□□□ -0.9
DDR1-240ENST00000454612 A8MWP6 167 aa9.41□□□□□ -0.9
DDR1-240ENST00000454612 OR4A8P0C604 315 aa9.41□□□□□ -0.9
DDR1-240ENST00000454612 C9orf106Q8NAJ2 232 aa9.41□□□□□ -0.9
DDR1-240ENST00000454612 C18orf12Q96KH6 178 aa9.41□□□□□ -0.9
DDR1-240ENST00000454612 FGF23Q9GZV9 251 aaPredicted RBP9.41□□□□□ -0.9
DDR1-240ENST00000454612 GYPAP02724 150 aa9.41□□□□□ -0.9
DDR1-240ENST00000454612 OR10J4P0C629 311 aa9.41□□□□□ -0.9
DDR1-240ENST00000454612 MYOD1P15172 320 aa9.41□□□□□ -0.9
DDR1-240ENST00000454612 MIC13Q5XKP0 118 aa9.41□□□□□ -0.9
DDR1-240ENST00000454612 DECR2Q9NUI1 292 aa9.41□□□□□ -0.9
DDR1-240ENST00000454612 TUBD1Q9UJT1 453 aa9.41□□□□□ -0.9
DDR1-240ENST00000454612 IFITM10A6NMD0 228 aa9.4□□□□□ -0.9
DDR1-240ENST00000454612 H3BTX0 84 aa9.4□□□□□ -0.9
DDR1-240ENST00000454612 CECR9P0C854 216 aa9.4□□□□□ -0.9
DDR1-240ENST00000454612 CEACAM1P13688 526 aa9.4□□□□□ -0.9
DDR1-240ENST00000454612 ARL16Q0P5N6 197 aa9.4□□□□□ -0.9
DDR1-240ENST00000454612 LDLRAD2Q5SZI1 272 aa9.4□□□□□ -0.9
DDR1-240ENST00000454612 RCC1LQ96I51 464 aaKnown RBP9.4□□□□□ -0.9
DDR1-240ENST00000454612 ZNRD1Q9P1U0 126 aa9.4□□□□□ -0.9
DDR1-240ENST00000454612 TLN2Q9Y4G6 2542 aa9.4□□□□□ -0.9
DDR1-240ENST00000454612 C21orf140B9A014 251 aa9.4□□□□□ -0.9
DDR1-240ENST00000454612 PITX3O75364 302 aa9.4□□□□□ -0.9
DDR1-240ENST00000454612 ACP1P24666 158 aa9.4□□□□□ -0.9
DDR1-240ENST00000454612 CNN1P51911 297 aaKnown RBP9.4□□□□□ -0.9
DDR1-240ENST00000454612 RPL30P62888 115 aaKnown RBP9.4□□□□□ -0.9
DDR1-240ENST00000454612 FOXC1Q12948 553 aa9.4□□□□□ -0.9
DDR1-240ENST00000454612 ATOH7Q8N100 152 aa9.4□□□□□ -0.9
DDR1-240ENST00000454612 RPRMLQ8N4K4 120 aa9.4□□□□□ -0.9
DDR1-240ENST00000454612 OR5AU1Q8NGC0 362 aa9.4□□□□□ -0.9
DDR1-240ENST00000454612 OR1L6Q8NGR2 347 aa9.4□□□□□ -0.9
DDR1-240ENST00000454612 TPPP3Q9BW30 176 aa9.4□□□□□ -0.9
DDR1-240ENST00000454612 TRBV6-7A0A0A0MS04 114 aa9.4□□□□□ -0.91
DDR1-240ENST00000454612 GRIFINA4D1Z8 144 aa9.4□□□□□ -0.91
DDR1-240ENST00000454612 H0Y980 276 aa9.4□□□□□ -0.91
DDR1-240ENST00000454612 CRISP2P16562 243 aa9.4□□□□□ -0.91
DDR1-240ENST00000454612 RAB31Q13636 194 aa9.4□□□□□ -0.91
DDR1-240ENST00000454612 TMEM108Q6UXF1 575 aa9.4□□□□□ -0.91
DDR1-240ENST00000454612 NUDT11Q96G61 164 aa9.4□□□□□ -0.91
DDR1-240ENST00000454612 HSD17B10Q99714 261 aaKnown RBP9.4□□□□□ -0.91
DDR1-240ENST00000454612 GINS3Q9BRX5 216 aa9.4□□□□□ -0.91
DDR1-240ENST00000454612 ODAMA1E959 279 aa9.39□□□□□ -0.91
DDR1-240ENST00000454612 SMPD2O60906 423 aa9.39□□□□□ -0.91
DDR1-240ENST00000454612 NDUFB4O95168 129 aa9.39□□□□□ -0.91
DDR1-240ENST00000454612 AMBPP02760 352 aa9.39□□□□□ -0.91
DDR1-240ENST00000454612 C1orf185Q5T7R7 199 aa9.39□□□□□ -0.91
DDR1-240ENST00000454612 STUMQ69YW2 141 aa9.39□□□□□ -0.91
DDR1-240ENST00000454612 FAM216AQ8WUB2 273 aa9.39□□□□□ -0.91
DDR1-240ENST00000454612 NUDT16L1Q9BRJ7 211 aaKnown RBP9.39□□□□□ -0.91
DDR1-240ENST00000454612 CLCF1Q9UBD9 225 aa9.39□□□□□ -0.91
DDR1-240ENST00000454612 C11orf94C9JXX5 98 aa9.39□□□□□ -0.91
DDR1-240ENST00000454612 UCP1P25874 307 aa9.39□□□□□ -0.91
DDR1-240ENST00000454612 RIPPLY3P57055 190 aa9.39□□□□□ -0.91
DDR1-240ENST00000454612 C16orf82Q7Z2V1 217 aa9.39□□□□□ -0.91
DDR1-240ENST00000454612 TCTEX1D1Q8N7M0 179 aa9.39□□□□□ -0.91
DDR1-240ENST00000454612 NHLRC2Q8NBF2 726 aa9.39□□□□□ -0.91
DDR1-240ENST00000454612 TAF15Q92804 592 aaKnown RBP eCLIP9.39□□□□□ -0.91
DDR1-240ENST00000454612 BCL2L2Q92843 193 aaPredicted RBP9.39□□□□□ -0.91
DDR1-240ENST00000454612 DIRC2Q96SL1 478 aa9.39□□□□□ -0.91
DDR1-240ENST00000454612 KIAA1456Q9P272 454 aa9.39□□□□□ -0.91
DDR1-240ENST00000454612 MYO18BQ8IUG5 2567 aa9.39□□□□□ -0.91
DDR1-240ENST00000454612 A0A1B0GU03 582 aa9.39□□□□□ -0.91
DDR1-240ENST00000454612 FAM157AC9JC47 383 aa9.39□□□□□ -0.91
DDR1-240ENST00000454612 DIRC3C9JPN6 131 aa9.39□□□□□ -0.91
DDR1-240ENST00000454612 C17orf112F2Z3M2 114 aa9.39□□□□□ -0.91
DDR1-240ENST00000454612 DLL1O00548 723 aa9.39□□□□□ -0.91
DDR1-240ENST00000454612 TNFSF4P23510 183 aa9.39□□□□□ -0.91
DDR1-240ENST00000454612 TNFAIP6P98066 277 aaPredicted RBP9.39□□□□□ -0.91
DDR1-240ENST00000454612 ELOBQ15370 118 aa9.39□□□□□ -0.91
DDR1-240ENST00000454612 OR4P4Q8NGL7 312 aa9.39□□□□□ -0.91
DDR1-240ENST00000454612 QTRT1Q9BXR0 403 aaKnown RBP9.39□□□□□ -0.91
DDR1-240ENST00000454612 WASHC3Q9Y3C0 194 aa9.39□□□□□ -0.91
DDR1-240ENST00000454612 PNRC1Q12796 327 aaPredicted RBP9.38□□□□□ -0.91
DDR1-240ENST00000454612 CLEC2AQ6UVW9 174 aa9.38□□□□□ -0.91
DDR1-240ENST00000454612 OR10X1Q8NGY0 326 aa9.38□□□□□ -0.91
DDR1-240ENST00000454612 CXXC4Q9H2H0 198 aa9.38□□□□□ -0.91
DDR1-240ENST00000454612 PPIAL4AQ9Y536 164 aa9.38□□□□□ -0.91
DDR1-240ENST00000454612 ATMQ13315 3056 aa9.38□□□□□ -0.91
DDR1-240ENST00000454612 TRGV8A0A0C4DH27 118 aa9.38□□□□□ -0.91
DDR1-240ENST00000454612 A0A1W2PNU3 283 aaPredicted RBP9.38□□□□□ -0.91
DDR1-240ENST00000454612 ETV2O00321 342 aaPredicted RBP9.38□□□□□ -0.91
DDR1-240ENST00000454612 GZMBP10144 247 aa9.38□□□□□ -0.91
DDR1-240ENST00000454612 BCL2P10415 239 aa9.38□□□□□ -0.91
DDR1-240ENST00000454612 KLF3P57682 345 aaPredicted RBP9.38□□□□□ -0.91
DDR1-240ENST00000454612 MMDQ15546 238 aa9.38□□□□□ -0.91
DDR1-240ENST00000454612 OR5R1Q8NH85 324 aa9.38□□□□□ -0.91
DDR1-240ENST00000454612 HSBP1O75506 76 aa9.38□□□□□ -0.91
DDR1-240ENST00000454612 SRP19P09132 144 aaKnown RBP9.38□□□□□ -0.91
DDR1-240ENST00000454612 LINC00614P0C842 121 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms