RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 FAM24AA6NFZ4 105 aa4.82□□□□□ -1.64
SDC4P-201ENST00000453285 OOSP1A8MZH6 123 aa4.82□□□□□ -1.64
SDC4P-201ENST00000453285 H7C2Y5 167 aa4.82□□□□□ -1.64
SDC4P-201ENST00000453285 TIMM23O14925 209 aa4.82□□□□□ -1.64
SDC4P-201ENST00000453285 SHOXO15266 292 aa4.82□□□□□ -1.64
SDC4P-201ENST00000453285 SYNGR2O43760 224 aa4.82□□□□□ -1.64
SDC4P-201ENST00000453285 SSSCA1O60232 199 aa4.82□□□□□ -1.64
SDC4P-201ENST00000453285 PET100P0DJ07 73 aa4.82□□□□□ -1.64
SDC4P-201ENST00000453285 SAA1P0DJI8 122 aaPredicted RBP4.82□□□□□ -1.64
SDC4P-201ENST00000453285 IGHV4-31P0DP07 118 aa4.82□□□□□ -1.64
SDC4P-201ENST00000453285 CNTFRP26992 372 aa4.82□□□□□ -1.64
SDC4P-201ENST00000453285 CD1BP29016 333 aa4.82□□□□□ -1.64
SDC4P-201ENST00000453285 RPL12P30050 165 aaKnown RBP4.82□□□□□ -1.64
SDC4P-201ENST00000453285 S100A11P31949 105 aa4.82□□□□□ -1.64
SDC4P-201ENST00000453285 CEACAM3P40198 252 aa4.82□□□□□ -1.64
SDC4P-201ENST00000453285 P2RY1P47900 373 aa4.82□□□□□ -1.64
SDC4P-201ENST00000453285 RAB13P51153 203 aa4.82□□□□□ -1.64
SDC4P-201ENST00000453285 ERVK-16P61578 105 aa4.82□□□□□ -1.64
SDC4P-201ENST00000453285 RPS16P62249 146 aaKnown RBP4.82□□□□□ -1.64
SDC4P-201ENST00000453285 TNFRSF9Q07011 255 aa4.82□□□□□ -1.64
SDC4P-201ENST00000453285 EBI3Q14213 229 aa4.82□□□□□ -1.64
SDC4P-201ENST00000453285 PDLIM3Q53GG5 364 aaPredicted RBP4.82□□□□□ -1.64
SDC4P-201ENST00000453285 ZNF429Q86V71 674 aa4.82□□□□□ -1.64
SDC4P-201ENST00000453285 LINC01356Q8N9X3 169 aa4.82□□□□□ -1.64
SDC4P-201ENST00000453285 MAPK1IP1LQ8NDC0 245 aa4.82□□□□□ -1.64
SDC4P-201ENST00000453285 OR52E5Q8NH55 327 aa4.82□□□□□ -1.64
SDC4P-201ENST00000453285 TMEM167AQ8TBQ9 72 aa4.82□□□□□ -1.64
SDC4P-201ENST00000453285 MALSU1Q96EH3 234 aa4.82□□□□□ -1.64
SDC4P-201ENST00000453285 BSCL2Q96G97 398 aaPredicted RBP4.82□□□□□ -1.64
SDC4P-201ENST00000453285 SMIM8Q96KF7 97 aa4.82□□□□□ -1.64
SDC4P-201ENST00000453285 HARBI1Q96MB7 349 aa4.82□□□□□ -1.64
SDC4P-201ENST00000453285 RNF5Q99942 180 aa4.82□□□□□ -1.64
SDC4P-201ENST00000453285 MS4A7Q9GZW8 240 aaPredicted RBP4.82□□□□□ -1.64
SDC4P-201ENST00000453285 RBKSQ9H477 322 aa4.82□□□□□ -1.64
SDC4P-201ENST00000453285 CYTL1Q9NRR1 136 aa4.82□□□□□ -1.64
SDC4P-201ENST00000453285 TMEM14BQ9NUH8 114 aa4.82□□□□□ -1.64
SDC4P-201ENST00000453285 HIF1ANQ9NWT6 349 aa4.82□□□□□ -1.64
SDC4P-201ENST00000453285 HILPDAQ9Y5L2 63 aa4.82□□□□□ -1.64
SDC4P-201ENST00000453285 AUP1Q9Y679 476 aa4.82□□□□□ -1.64
SDC4P-201ENST00000453285 IGHV1-69DA0A0B4J2H0 117 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 TEX50A0A1B0GTY4 177 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 IGSF23A1L1A6 192 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 CGB1A6NKQ9 187 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 C15orf61A6NNL5 157 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 WRBO00258 174 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 NPFFO15130 113 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 GPR137BO60478 399 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 KBTBD11O94819 623 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 VENTXO95231 258 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 CFDP00746 253 aaPredicted RBP4.81□□□□□ -1.64
SDC4P-201ENST00000453285 IGHV1-69P01742 117 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 IGHV4-38-2P0DP08 117 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 IAPPP10997 89 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 MYOD1P15172 320 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 GATA3P23771 443 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 SAA4P35542 130 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 VDAC2P45880 294 aaPredicted RBP4.81□□□□□ -1.64
SDC4P-201ENST00000453285 LGALS7P47929 136 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 AP2S1P53680 142 aaPredicted RBP4.81□□□□□ -1.64
SDC4P-201ENST00000453285 LGALS4P56470 323 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 TAS2R30P59541 319 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 OR2B8PP59922 312 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 SPCS3P61009 180 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 UBE2KP61086 200 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 HSPE1P61604 102 aaKnown RBP4.81□□□□□ -1.64
SDC4P-201ENST00000453285 NHLH2Q02577 135 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 PSG5Q15238 335 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 SSX2Q16385 188 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 TMEM249Q2WGJ8 235 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 KLF17Q5JT82 389 aaPredicted RBP4.81□□□□□ -1.64
SDC4P-201ENST00000453285 GPR157Q5UAW9 335 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 RUSC1-AS1Q66K80 236 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 CLEC9AQ6UXN8 241 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 THNSL2Q86YJ6 484 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 OR2C3Q8N628 320 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 Q8N6K4 173 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 TMEM252Q8N6L7 170 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 TEX45Q8NA69 505 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 INO80EQ8NBZ0 244 aaPredicted RBP4.81□□□□□ -1.64
SDC4P-201ENST00000453285 WFDC11Q8NEX6 87 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 OR4A16Q8NH70 328 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 OR4A5Q8NH83 315 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 ZDHHC16Q969W1 377 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 EAF1Q96JC9 268 aaPredicted RBP4.81□□□□□ -1.64
SDC4P-201ENST00000453285 RAB40CQ96S21 281 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 FOXC2Q99958 501 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 AIFM2Q9BRQ8 373 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 GON7Q9BXV9 100 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 ARL6Q9H0F7 186 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 SLA2Q9H6Q3 261 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 C7orf69Q9H7B7 122 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 LYRM2Q9NU23 88 aaPredicted RBP4.81□□□□□ -1.64
SDC4P-201ENST00000453285 TCF19Q9Y242 345 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 FOXA2Q9Y261 457 aaPredicted RBP4.81□□□□□ -1.64
SDC4P-201ENST00000453285 WSB1Q9Y6I7 421 aa4.81□□□□□ -1.64
SDC4P-201ENST00000453285 ZNF469Q96JG9 3925 aaPredicted RBP4.81□□□□□ -1.64
SDC4P-201ENST00000453285 IGHV3OR16-10A0A075B7F0 116 aa4.8□□□□□ -1.64
SDC4P-201ENST00000453285 TRAV40A0A0B4J280 105 aa4.8□□□□□ -1.64
SDC4P-201ENST00000453285 A0A1B0GW64 132 aa4.8□□□□□ -1.64
SDC4P-201ENST00000453285 PMS2P5A8MQ11 134 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms