RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 K7EP34 96 aa7.22□□□□□ -1.25
LSM5-208ENST00000450169 ARL14EPLP0DKL9 152 aa7.22□□□□□ -1.25
LSM5-208ENST00000450169 PLP1P60201 277 aa7.22□□□□□ -1.25
LSM5-208ENST00000450169 WDR82Q6UXN9 313 aa7.22□□□□□ -1.25
LSM5-208ENST00000450169 TMEM45BQ96B21 275 aa7.22□□□□□ -1.25
LSM5-208ENST00000450169 OR2W1Q9Y3N9 320 aa7.22□□□□□ -1.25
LSM5-208ENST00000450169 SELENOKQ9Y6D0 94 aa7.22□□□□□ -1.25
LSM5-208ENST00000450169 PRUNE2Q8WUY3 3088 aa7.22□□□□□ -1.25
LSM5-208ENST00000450169 MYO9BQ13459 2157 aa7.21□□□□□ -1.25
LSM5-208ENST00000450169 TMEM265A0A087WTH1 108 aa7.21□□□□□ -1.25
LSM5-208ENST00000450169 OR10J4P0C629 311 aa7.21□□□□□ -1.25
LSM5-208ENST00000450169 TCL1AP56279 114 aa7.21□□□□□ -1.25
LSM5-208ENST00000450169 GAB4Q2WGN9 574 aa7.21□□□□□ -1.25
LSM5-208ENST00000450169 TMEM240Q5SV17 173 aa7.21□□□□□ -1.25
LSM5-208ENST00000450169 RNASEKQ6P5S7 137 aaKnown RBP7.21□□□□□ -1.25
LSM5-208ENST00000450169 BHLHA15Q7RTS1 189 aaPredicted RBP7.21□□□□□ -1.25
LSM5-208ENST00000450169 KIR3DL3Q8N743 410 aa7.21□□□□□ -1.25
LSM5-208ENST00000450169 LMX1AQ8TE12 382 aa7.21□□□□□ -1.25
LSM5-208ENST00000450169 OR2D2Q9H210 308 aa7.21□□□□□ -1.25
LSM5-208ENST00000450169 SCRT2Q9NQ03 307 aa7.21□□□□□ -1.25
LSM5-208ENST00000450169 WNT16Q9UBV4 365 aa7.21□□□□□ -1.25
LSM5-208ENST00000450169 C19orf25Q9UFG5 118 aaPredicted RBP7.21□□□□□ -1.25
LSM5-208ENST00000450169 ATP23Q9Y6H3 246 aa7.21□□□□□ -1.25
LSM5-208ENST00000450169 TDRD6O60522 2096 aaKnown RBP7.21□□□□□ -1.26
LSM5-208ENST00000450169 TRAV26-1A0A087WT03 109 aa7.21□□□□□ -1.26
LSM5-208ENST00000450169 PMS2P5A8MQ11 134 aa7.21□□□□□ -1.26
LSM5-208ENST00000450169 SHISA8B8ZZ34 492 aa7.21□□□□□ -1.26
LSM5-208ENST00000450169 CRXO43186 299 aaPredicted RBP7.21□□□□□ -1.26
LSM5-208ENST00000450169 CD3EP07766 207 aa7.21□□□□□ -1.26
LSM5-208ENST00000450169 GPR183P32249 361 aa7.21□□□□□ -1.26
LSM5-208ENST00000450169 CEACAM3P40198 252 aa7.21□□□□□ -1.26
LSM5-208ENST00000450169 CRYBA4P53673 196 aa7.21□□□□□ -1.26
LSM5-208ENST00000450169 FBXW4P57775 412 aa7.21□□□□□ -1.26
LSM5-208ENST00000450169 SEC11AP67812 179 aa7.21□□□□□ -1.26
LSM5-208ENST00000450169 SLAQ13239 276 aa7.21□□□□□ -1.26
LSM5-208ENST00000450169 VWC2Q2TAL6 325 aa7.21□□□□□ -1.26
LSM5-208ENST00000450169 PCSK4Q6UW60 755 aa7.21□□□□□ -1.26
LSM5-208ENST00000450169 FOXL2NBQ6ZUU3 175 aa7.21□□□□□ -1.26
LSM5-208ENST00000450169 STXBP6Q8NFX7 210 aa7.21□□□□□ -1.26
LSM5-208ENST00000450169 FAM216AQ8WUB2 273 aa7.21□□□□□ -1.26
LSM5-208ENST00000450169 SPTSSAQ969W0 71 aa7.21□□□□□ -1.26
LSM5-208ENST00000450169 JMJD8Q96S16 334 aa7.21□□□□□ -1.26
LSM5-208ENST00000450169 YTHDF2Q9Y5A9 579 aaKnown RBP7.21□□□□□ -1.26
LSM5-208ENST00000450169 C9orf118A6NHY6 69 aa7.2□□□□□ -1.26
LSM5-208ENST00000450169 TMEM150CB9EJG8 249 aa7.2□□□□□ -1.26
LSM5-208ENST00000450169 CXorf1O96002 111 aa7.2□□□□□ -1.26
LSM5-208ENST00000450169 SRFP11831 508 aa7.2□□□□□ -1.26
LSM5-208ENST00000450169 REG1BP48304 166 aa7.2□□□□□ -1.26
LSM5-208ENST00000450169 FOXL2P58012 376 aa7.2□□□□□ -1.26
LSM5-208ENST00000450169 RPS16P62249 146 aaKnown RBP7.2□□□□□ -1.26
LSM5-208ENST00000450169 ZNF776Q68DI1 518 aaPredicted RBP7.2□□□□□ -1.26
LSM5-208ENST00000450169 MRPL43Q8N983 215 aaKnown RBP7.2□□□□□ -1.26
LSM5-208ENST00000450169 OR5A2Q8NGI9 324 aa7.2□□□□□ -1.26
LSM5-208ENST00000450169 OR2T6Q8NHC8 308 aa7.2□□□□□ -1.26
LSM5-208ENST00000450169 NPFFR1Q9GZQ6 430 aa7.2□□□□□ -1.26
LSM5-208ENST00000450169 SAP30LQ9HAJ7 183 aa7.2□□□□□ -1.26
LSM5-208ENST00000450169 TNFRSF19Q9NS68 423 aa7.2□□□□□ -1.26
LSM5-208ENST00000450169 LIN7CQ9NUP9 197 aaKnown RBP7.2□□□□□ -1.26
LSM5-208ENST00000450169 PLEK2Q9NYT0 353 aa7.2□□□□□ -1.26
LSM5-208ENST00000450169 TECRQ9NZ01 308 aaKnown RBP7.2□□□□□ -1.26
LSM5-208ENST00000450169 C1RLQ9NZP8 487 aa7.2□□□□□ -1.26
LSM5-208ENST00000450169 THYN1Q9P016 225 aa7.2□□□□□ -1.26
LSM5-208ENST00000450169 TRGV10A0A0A0MS01 117 aa7.2□□□□□ -1.26
LSM5-208ENST00000450169 HSPB6O14558 160 aa7.2□□□□□ -1.26
LSM5-208ENST00000450169 TNFSF11O14788 317 aa7.2□□□□□ -1.26
LSM5-208ENST00000450169 USF1P22415 310 aaPredicted RBP7.2□□□□□ -1.26
LSM5-208ENST00000450169 CD1BP29016 333 aa7.2□□□□□ -1.26
LSM5-208ENST00000450169 EDDM3BP56851 147 aa7.2□□□□□ -1.26
LSM5-208ENST00000450169 CKS1BP61024 79 aa7.2□□□□□ -1.26
LSM5-208ENST00000450169 FXYD3Q14802 87 aa7.2□□□□□ -1.26
LSM5-208ENST00000450169 ZNF718Q3SXZ3 478 aa7.2□□□□□ -1.26
LSM5-208ENST00000450169 ZNF585BQ52M93 769 aa7.2□□□□□ -1.26
LSM5-208ENST00000450169 TMEM42Q69YG0 159 aa7.2□□□□□ -1.26
LSM5-208ENST00000450169 SFTPA2Q8IWL1 248 aa7.2□□□□□ -1.26
LSM5-208ENST00000450169 SPACA3Q8IXA5 215 aa7.2□□□□□ -1.26
LSM5-208ENST00000450169 Q8N7P7 452 aa7.2□□□□□ -1.26
LSM5-208ENST00000450169 OR2K2Q8NGT1 345 aa7.2□□□□□ -1.26
LSM5-208ENST00000450169 OR4A5Q8NH83 315 aa7.2□□□□□ -1.26
LSM5-208ENST00000450169 CT55Q8WUE5 264 aa7.2□□□□□ -1.26
LSM5-208ENST00000450169 C11orf52Q96A22 123 aa7.2□□□□□ -1.26
LSM5-208ENST00000450169 CLDN23Q96B33 292 aa7.2□□□□□ -1.26
LSM5-208ENST00000450169 CCDC140Q96MF4 163 aa7.2□□□□□ -1.26
LSM5-208ENST00000450169 RNASE7Q9H1E1 156 aaKnown RBP7.2□□□□□ -1.26
LSM5-208ENST00000450169 WDR54Q9H977 334 aa7.2□□□□□ -1.26
LSM5-208ENST00000450169 JKAMPQ9P055 326 aa7.2□□□□□ -1.26
LSM5-208ENST00000450169 PPP1R3CQ9UQK1 317 aa7.2□□□□□ -1.26
LSM5-208ENST00000450169 RTTNQ86VV8 2226 aa7.19□□□□□ -1.26
LSM5-208ENST00000450169 GTF3C1Q12789 2109 aa7.19□□□□□ -1.26
LSM5-208ENST00000450169 A0A0G2JMM0 328 aa7.19□□□□□ -1.26
LSM5-208ENST00000450169 SERTM2A0A1B0GWG4 89 aa7.19□□□□□ -1.26
LSM5-208ENST00000450169 A0A1W2PPB8 328 aa7.19□□□□□ -1.26
LSM5-208ENST00000450169 FAM90A10PA6NDY2 464 aa7.19□□□□□ -1.26
LSM5-208ENST00000450169 FAM90A18PA6NE21 464 aa7.19□□□□□ -1.26
LSM5-208ENST00000450169 FAM90A16PA6NEW6 464 aa7.19□□□□□ -1.26
LSM5-208ENST00000450169 FAM90A20PA6NIJ5 464 aa7.19□□□□□ -1.26
LSM5-208ENST00000450169 FAM90A8PA6NJQ4 464 aa7.19□□□□□ -1.26
LSM5-208ENST00000450169 FAM90A7PA6NKC0 464 aa7.19□□□□□ -1.26
LSM5-208ENST00000450169 FAM90A22PA8MWA6 464 aa7.19□□□□□ -1.26
LSM5-208ENST00000450169 KIR3DP1A8MWS1 328 aa7.19□□□□□ -1.26
LSM5-208ENST00000450169 FAM90A12PA8MX19 464 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms