RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 CXCL1P09341 107 aa8.09□□□□□ -1.11
CCDC171-203ENST00000449575 LMO1P25800 156 aa8.09□□□□□ -1.11
CCDC171-203ENST00000449575 G0S2P27469 103 aa8.09□□□□□ -1.11
CCDC171-203ENST00000449575 GLIPR1P48060 266 aa8.09□□□□□ -1.11
CCDC171-203ENST00000449575 AESQ08117 197 aa8.09□□□□□ -1.11
CCDC171-203ENST00000449575 TCF23Q7RTU1 214 aa8.09□□□□□ -1.11
CCDC171-203ENST00000449575 PLPPR1Q8TBJ4 325 aa8.09□□□□□ -1.11
CCDC171-203ENST00000449575 TMEM230Q96A57 120 aa8.09□□□□□ -1.11
CCDC171-203ENST00000449575 COQ2Q96H96 371 aa8.09□□□□□ -1.11
CCDC171-203ENST00000449575 RPUSD1Q9UJJ7 312 aaKnown RBP8.09□□□□□ -1.11
CCDC171-203ENST00000449575 TRAV39A0A0B4J263 110 aa8.09□□□□□ -1.11
CCDC171-203ENST00000449575 IGHV2-70DA0A0C4DH43 119 aa8.09□□□□□ -1.11
CCDC171-203ENST00000449575 SOCS1O15524 211 aa8.09□□□□□ -1.11
CCDC171-203ENST00000449575 IFNA21P01568 189 aa8.09□□□□□ -1.11
CCDC171-203ENST00000449575 ZNF25P17030 456 aaPredicted RBP8.09□□□□□ -1.11
CCDC171-203ENST00000449575 P2RY1P47900 373 aa8.09□□□□□ -1.11
CCDC171-203ENST00000449575 EDDM3BP56851 147 aa8.09□□□□□ -1.11
CCDC171-203ENST00000449575 FAM189A2Q15884 450 aa8.09□□□□□ -1.11
CCDC171-203ENST00000449575 ANKRD55Q3KP44 614 aa8.09□□□□□ -1.11
CCDC171-203ENST00000449575 GFI1BQ5VTD9 330 aa8.09□□□□□ -1.11
CCDC171-203ENST00000449575 TMEM183AQ8IXX5 376 aa8.09□□□□□ -1.11
CCDC171-203ENST00000449575 ZNF664Q8N3J9 261 aa8.09□□□□□ -1.11
CCDC171-203ENST00000449575 SNX22Q96L94 193 aa8.09□□□□□ -1.11
CCDC171-203ENST00000449575 TMEM59Q9BXS4 323 aa8.09□□□□□ -1.11
CCDC171-203ENST00000449575 POLR3KQ9Y2Y1 108 aaPredicted RBP8.09□□□□□ -1.11
CCDC171-203ENST00000449575 INAFM1C9JVW0 142 aa8.08□□□□□ -1.12
CCDC171-203ENST00000449575 E5RGE8 158 aa8.08□□□□□ -1.12
CCDC171-203ENST00000449575 SNRPCP09234 159 aaKnown RBP8.08□□□□□ -1.12
CCDC171-203ENST00000449575 GZMBP10144 247 aa8.08□□□□□ -1.12
CCDC171-203ENST00000449575 NPY4RP50391 375 aa8.08□□□□□ -1.12
CCDC171-203ENST00000449575 IL13RA2Q14627 380 aa8.08□□□□□ -1.12
CCDC171-203ENST00000449575 GPR157Q5UAW9 335 aa8.08□□□□□ -1.12
CCDC171-203ENST00000449575 SLC35E3Q7Z769 313 aa8.08□□□□□ -1.12
CCDC171-203ENST00000449575 FAM219AQ8IW50 185 aa8.08□□□□□ -1.12
CCDC171-203ENST00000449575 FAM210BQ96KR6 192 aa8.08□□□□□ -1.12
CCDC171-203ENST00000449575 ANAPC10Q9UM13 185 aa8.08□□□□□ -1.12
CCDC171-203ENST00000449575 NSG2Q9Y328 171 aa8.08□□□□□ -1.12
CCDC171-203ENST00000449575 INSIG2Q9Y5U4 225 aa8.08□□□□□ -1.12
CCDC171-203ENST00000449575 RBFOX3A6NFN3 312 aa8.08□□□□□ -1.12
CCDC171-203ENST00000449575 DLEU1O43261 78 aa8.08□□□□□ -1.12
CCDC171-203ENST00000449575 GSTP1P09211 210 aaKnown RBP8.08□□□□□ -1.12
CCDC171-203ENST00000449575 CCL3L1P16619 93 aa8.08□□□□□ -1.12
CCDC171-203ENST00000449575 ARF6P62330 175 aa8.08□□□□□ -1.12
CCDC171-203ENST00000449575 IAH1Q2TAA2 248 aaPredicted RBP8.08□□□□□ -1.12
CCDC171-203ENST00000449575 TMEM200BQ69YZ2 307 aa8.08□□□□□ -1.12
CCDC171-203ENST00000449575 C6orf201Q7Z4U5 140 aa8.08□□□□□ -1.12
CCDC171-203ENST00000449575 C5orf24Q7Z6I8 188 aa8.08□□□□□ -1.12
CCDC171-203ENST00000449575 FOXRED2Q8IWF2 684 aa8.08□□□□□ -1.12
CCDC171-203ENST00000449575 KCNG3Q8TAE7 436 aa8.08□□□□□ -1.12
CCDC171-203ENST00000449575 NIPSNAP3BQ9BS92 247 aa8.08□□□□□ -1.12
CCDC171-203ENST00000449575 PARP12Q9H0J9 701 aaKnown RBP8.08□□□□□ -1.12
CCDC171-203ENST00000449575 TMEM242Q9NWH2 141 aa8.08□□□□□ -1.12
CCDC171-203ENST00000449575 TGIF2-C20orf24A0A0A6YYL0 155 aa8.07□□□□□ -1.12
CCDC171-203ENST00000449575 PPIAL4CA0A0B4J2A2 164 aa8.07□□□□□ -1.12
CCDC171-203ENST00000449575 KIR2DS1A0A191URI9 304 aa8.07□□□□□ -1.12
CCDC171-203ENST00000449575 GPR137BO60478 399 aa8.07□□□□□ -1.12
CCDC171-203ENST00000449575 PPIAL4GP0DN37 164 aa8.07□□□□□ -1.12
CCDC171-203ENST00000449575 ECI1P42126 302 aa8.07□□□□□ -1.12
CCDC171-203ENST00000449575 TMEM50BP56557 158 aa8.07□□□□□ -1.12
CCDC171-203ENST00000449575 SUPT4H1P63272 117 aaKnown RBP8.07□□□□□ -1.12
CCDC171-203ENST00000449575 DLK1P80370 383 aa8.07□□□□□ -1.12
CCDC171-203ENST00000449575 CR1LQ2VPA4 569 aa8.07□□□□□ -1.12
CCDC171-203ENST00000449575 ZNF429Q86V71 674 aa8.07□□□□□ -1.12
CCDC171-203ENST00000449575 FAM185AQ8N0U4 392 aa8.07□□□□□ -1.12
CCDC171-203ENST00000449575 LY6G5BQ8NDX9 201 aa8.07□□□□□ -1.12
CCDC171-203ENST00000449575 OR5H2Q8NGV7 314 aa8.07□□□□□ -1.12
CCDC171-203ENST00000449575 FRZBQ92765 325 aa8.07□□□□□ -1.12
CCDC171-203ENST00000449575 SMIM3Q9BZL3 60 aa8.07□□□□□ -1.12
CCDC171-203ENST00000449575 FBLN5Q9UBX5 448 aa8.07□□□□□ -1.12
CCDC171-203ENST00000449575 ZNF727A8MUV8 499 aa8.07□□□□□ -1.12
CCDC171-203ENST00000449575 EREGO14944 169 aa8.07□□□□□ -1.12
CCDC171-203ENST00000449575 RPL31P62899 125 aaKnown RBP8.07□□□□□ -1.12
CCDC171-203ENST00000449575 MPV17LQ2QL34 196 aa8.07□□□□□ -1.12
CCDC171-203ENST00000449575 PLAC9Q5JTB6 97 aa8.07□□□□□ -1.12
CCDC171-203ENST00000449575 Q6ZPA2 131 aa8.07□□□□□ -1.12
CCDC171-203ENST00000449575 C11orf42Q8N5U0 333 aa8.07□□□□□ -1.12
CCDC171-203ENST00000449575 Q8N7P7 452 aa8.07□□□□□ -1.12
CCDC171-203ENST00000449575 ABHD5Q8WTS1 349 aa8.07□□□□□ -1.12
CCDC171-203ENST00000449575 ANAPC16Q96DE5 110 aa8.07□□□□□ -1.12
CCDC171-203ENST00000449575 RTBDNQ9BSG5 229 aaPredicted RBP8.07□□□□□ -1.12
CCDC171-203ENST00000449575 FAAP24Q9BTP7 215 aa8.07□□□□□ -1.12
CCDC171-203ENST00000449575 TM2D1Q9BX74 207 aa8.07□□□□□ -1.12
CCDC171-203ENST00000449575 FAM234AQ9H0X4 552 aa8.07□□□□□ -1.12
CCDC171-203ENST00000449575 C7orf69Q9H7B7 122 aa8.07□□□□□ -1.12
CCDC171-203ENST00000449575 C14orf166Q9Y224 244 aaKnown RBP8.07□□□□□ -1.12
CCDC171-203ENST00000449575 JMJD1CQ15652 2540 aa8.06□□□□□ -1.12
CCDC171-203ENST00000449575 IGHV3OR16-10A0A075B7F0 116 aa8.06□□□□□ -1.12
CCDC171-203ENST00000449575 FOXI3A8MTJ6 420 aaPredicted RBP8.06□□□□□ -1.12
CCDC171-203ENST00000449575 HSD17B6O14756 317 aa8.06□□□□□ -1.12
CCDC171-203ENST00000449575 MGST3O14880 152 aa8.06□□□□□ -1.12
CCDC171-203ENST00000449575 SLC25A17O43808 307 aa8.06□□□□□ -1.12
CCDC171-203ENST00000449575 OPN1MWP04001 364 aa8.06□□□□□ -1.12
CCDC171-203ENST00000449575 HSPB1P04792 205 aaKnown RBP8.06□□□□□ -1.12
CCDC171-203ENST00000449575 OPN1MW2P0DN77 364 aa8.06□□□□□ -1.12
CCDC171-203ENST00000449575 OPN1MW3P0DN78 364 aa8.06□□□□□ -1.12
CCDC171-203ENST00000449575 OR5H8P0DN80 308 aa8.06□□□□□ -1.12
CCDC171-203ENST00000449575 EPHA1P21709 976 aa8.06□□□□□ -1.12
CCDC171-203ENST00000449575 BLVRBP30043 206 aaPredicted RBP8.06□□□□□ -1.12
CCDC171-203ENST00000449575 PAX8Q06710 450 aa8.06□□□□□ -1.12
CCDC171-203ENST00000449575 UTF1Q5T230 341 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms