RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 COL6A6A6NMZ7 2263 aa8.81□□□□□ -1
CTC1-202ENST00000449476 PRR19A6NJB7 356 aa8.81□□□□□ -1
CTC1-202ENST00000449476 DIRC3C9JPN6 131 aa8.81□□□□□ -1
CTC1-202ENST00000449476 J3KRW8 73 aa8.81□□□□□ -1
CTC1-202ENST00000449476 TRGC1P0CF51 173 aa8.81□□□□□ -1
CTC1-202ENST00000449476 IGHV1-2P23083 117 aa8.81□□□□□ -1
CTC1-202ENST00000449476 PAFAH1B2P68402 229 aa8.81□□□□□ -1
CTC1-202ENST00000449476 ZIC4Q8N9L1 334 aa8.81□□□□□ -1
CTC1-202ENST00000449476 OR5R1Q8NH85 324 aa8.81□□□□□ -1
CTC1-202ENST00000449476 DCTN5Q9BTE1 182 aa8.81□□□□□ -1
CTC1-202ENST00000449476 SCN8AQ9UQD0 1980 aa8.81□□□□□ -1
CTC1-202ENST00000449476 IGHV3-48P01763 117 aa8.81□□□□□ -1
CTC1-202ENST00000449476 MPZP25189 248 aa8.81□□□□□ -1
CTC1-202ENST00000449476 FAM27E3Q08E93 113 aa8.81□□□□□ -1
CTC1-202ENST00000449476 TMEM56-RWDD3S4R434 201 aa8.81□□□□□ -1
CTC1-202ENST00000449476 CLPSP04118 112 aa8.8□□□□□ -1
CTC1-202ENST00000449476 CDX1P47902 265 aaPredicted RBP8.8□□□□□ -1
CTC1-202ENST00000449476 NUBP1P53384 320 aa8.8□□□□□ -1
CTC1-202ENST00000449476 LRRC75BQ2VPJ9 315 aa8.8□□□□□ -1
CTC1-202ENST00000449476 FAM201AQ5SY85 155 aa8.8□□□□□ -1
CTC1-202ENST00000449476 TMEM171Q8WVE6 324 aa8.8□□□□□ -1
CTC1-202ENST00000449476 WDYHV1Q96HA8 205 aa8.8□□□□□ -1
CTC1-202ENST00000449476 SLX1AQ9BQ83 275 aa8.8□□□□□ -1
CTC1-202ENST00000449476 THSD7BQ9C0I4 1608 aa8.8□□□□□ -1
CTC1-202ENST00000449476 TMEM30BQ3MIR4 351 aa8.8□□□□□ -1
CTC1-202ENST00000449476 FGFBP3Q8TAT2 258 aa8.8□□□□□ -1
CTC1-202ENST00000449476 FAM131CQ96AQ9 280 aa8.8□□□□□ -1
CTC1-202ENST00000449476 KIAA2026Q5HYC2 2103 aa8.8□□□□□ -1
CTC1-202ENST00000449476 DOCK7Q96N67 2140 aa8.8□□□□□ -1
CTC1-202ENST00000449476 TRBV6-7A0A0A0MS04 114 aa8.8□□□□□ -1
CTC1-202ENST00000449476 SRP19P09132 144 aaKnown RBP8.8□□□□□ -1
CTC1-202ENST00000449476 ZNF146Q15072 292 aa8.8□□□□□ -1
CTC1-202ENST00000449476 BPIFA4PQ86YQ2 179 aa8.8□□□□□ -1
CTC1-202ENST00000449476 STPG3Q8N7X2 389 aa8.8□□□□□ -1
CTC1-202ENST00000449476 TMEM116Q8NCL8 245 aa8.8□□□□□ -1
CTC1-202ENST00000449476 C1orf162Q8NEQ5 155 aaPredicted RBP8.8□□□□□ -1
CTC1-202ENST00000449476 OR4A5Q8NH83 315 aa8.8□□□□□ -1
CTC1-202ENST00000449476 PLPPR1Q8TBJ4 325 aa8.8□□□□□ -1
CTC1-202ENST00000449476 NPIPB3Q92617 1050 aa8.8□□□□□ -1
CTC1-202ENST00000449476 TMEM186Q96B77 213 aa8.8□□□□□ -1
CTC1-202ENST00000449476 FXYD3Q14802 87 aa8.8□□□□□ -1
CTC1-202ENST00000449476 NPCDR1Q9BY65 106 aa8.8□□□□□ -1
CTC1-202ENST00000449476 RNF115Q9Y4L5 304 aa8.8□□□□□ -1
CTC1-202ENST00000449476 THADAQ6YHU6 1953 aa8.79□□□□□ -1
CTC1-202ENST00000449476 PPIAL4CA0A0B4J2A2 164 aa8.79□□□□□ -1
CTC1-202ENST00000449476 IGHV2OR16-5A0A0B4J2B6 119 aa8.79□□□□□ -1
CTC1-202ENST00000449476 NTN3O00634 580 aaPredicted RBP8.79□□□□□ -1
CTC1-202ENST00000449476 HLA-DQA1P01909 254 aa8.79□□□□□ -1
CTC1-202ENST00000449476 REG1AP05451 166 aa8.79□□□□□ -1
CTC1-202ENST00000449476 PPIAL4GP0DN37 164 aa8.79□□□□□ -1
CTC1-202ENST00000449476 CRYGSP22914 178 aa8.79□□□□□ -1
CTC1-202ENST00000449476 ARF6P62330 175 aa8.79□□□□□ -1
CTC1-202ENST00000449476 OR51G1Q8NGK1 321 aa8.79□□□□□ -1
CTC1-202ENST00000449476 MYO7BQ6PIF6 2116 aa8.79□□□□□ -1
CTC1-202ENST00000449476 LDLRAD4O15165 306 aa8.79□□□□□ -1
CTC1-202ENST00000449476 CA2P00918 260 aa8.79□□□□□ -1
CTC1-202ENST00000449476 GTF2H5Q6ZYL4 71 aa8.79□□□□□ -1
CTC1-202ENST00000449476 MRPL18Q9H0U6 180 aaKnown RBP8.79□□□□□ -1
CTC1-202ENST00000449476 FOXD3Q9UJU5 478 aaPredicted RBP8.79□□□□□ -1
CTC1-202ENST00000449476 FER1L5A0AVI2 2057 aa8.79□□□□□ -1
CTC1-202ENST00000449476 IGKV1-12A0A0C4DH73 117 aa8.79□□□□□ -1
CTC1-202ENST00000449476 PINLYPA6NC86 204 aa8.79□□□□□ -1
CTC1-202ENST00000449476 F8VVB4 439 aa8.79□□□□□ -1
CTC1-202ENST00000449476 F8VWA3 439 aa8.79□□□□□ -1
CTC1-202ENST00000449476 RRHO14718 337 aa8.79□□□□□ -1
CTC1-202ENST00000449476 IGKV1D-12P01611 117 aa8.79□□□□□ -1
CTC1-202ENST00000449476 GCHFRP30047 84 aa8.79□□□□□ -1
CTC1-202ENST00000449476 CSRP2Q16527 193 aa8.79□□□□□ -1
CTC1-202ENST00000449476 FAM166AQ6J272 317 aa8.79□□□□□ -1
CTC1-202ENST00000449476 GATAD1Q8WUU5 269 aa8.79□□□□□ -1
CTC1-202ENST00000449476 ABCA1O95477 2261 aa8.79□□□□□ -1
CTC1-202ENST00000449476 TSC2P49815 1807 aa8.79□□□□□ -1
CTC1-202ENST00000449476 CBY3A6NI87 242 aa8.78□□□□□ -1
CTC1-202ENST00000449476 IQCF6A8MYZ5 107 aa8.78□□□□□ -1
CTC1-202ENST00000449476 M0QZK8 103 aa8.78□□□□□ -1
CTC1-202ENST00000449476 GGCTO75223 188 aaKnown RBP8.78□□□□□ -1
CTC1-202ENST00000449476 HOXA4Q00056 320 aaPredicted RBP8.78□□□□□ -1
CTC1-202ENST00000449476 DPF1Q92782 380 aa8.78□□□□□ -1
CTC1-202ENST00000449476 C18orf12Q96KH6 178 aa8.78□□□□□ -1
CTC1-202ENST00000449476 OR51M1Q9H341 326 aa8.78□□□□□ -1
CTC1-202ENST00000449476 ACSF3Q4G176 576 aaPredicted RBP8.78□□□□□ -1
CTC1-202ENST00000449476 FAM216BQ8N7L0 139 aa8.78□□□□□ -1
CTC1-202ENST00000449476 TMEM105Q8N8V8 129 aa8.78□□□□□ -1
CTC1-202ENST00000449476 C9orf106Q8NAJ2 232 aa8.78□□□□□ -1
CTC1-202ENST00000449476 NABP1Q96AH0 204 aa8.78□□□□□ -1
CTC1-202ENST00000449476 C19orf24Q9BVV8 132 aa8.78□□□□□ -1
CTC1-202ENST00000449476 HSPB8Q9UJY1 196 aa8.78□□□□□ -1
CTC1-202ENST00000449476 IGHV1-69-2A0A0G2JMI3 117 aa8.78□□□□□ -1
CTC1-202ENST00000449476 GCGP01275 180 aa8.78□□□□□ -1
CTC1-202ENST00000449476 FOXG1P55316 489 aaPredicted RBP8.78□□□□□ -1
CTC1-202ENST00000449476 TMEM97Q5BJF2 176 aa8.78□□□□□ -1
CTC1-202ENST00000449476 ZNF385CQ66K41 422 aaPredicted RBP8.78□□□□□ -1
CTC1-202ENST00000449476 PCSK4Q6UW60 755 aa8.78□□□□□ -1
CTC1-202ENST00000449476 ZNF525Q8N782 197 aa8.78□□□□□ -1
CTC1-202ENST00000449476 OR8A1Q8NGG7 326 aa8.78□□□□□ -1
CTC1-202ENST00000449476 SGK494Q96LW2 274 aa8.78□□□□□ -1
CTC1-202ENST00000449476 CBY1Q9Y3M2 126 aa8.78□□□□□ -1
CTC1-202ENST00000449476 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.78□□□□□ -1
CTC1-202ENST00000449476 COMPP49747 757 aaPredicted RBP8.78□□□□□ -1
CTC1-202ENST00000449476 ATP5IP56385 69 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms