RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 ITLN2Q8WWU7 325 aaPredicted RBP13.18□□□□□ -0.3
AP000253.1-201ENST00000449339 ZNF714Q96N38 554 aa13.18□□□□□ -0.3
AP000253.1-201ENST00000449339 NDUFB3O43676 98 aa13.17□□□□□ -0.3
AP000253.1-201ENST00000449339 C4orf17Q53FE4 359 aa13.17□□□□□ -0.3
AP000253.1-201ENST00000449339 PDLIM3Q53GG5 364 aaPredicted RBP13.17□□□□□ -0.3
AP000253.1-201ENST00000449339 SOHLH1Q5JUK2 328 aa13.17□□□□□ -0.3
AP000253.1-201ENST00000449339 ETV3LQ6ZN32 361 aa13.17□□□□□ -0.3
AP000253.1-201ENST00000449339 CENPVQ7Z7K6 275 aaPredicted RBP13.17□□□□□ -0.3
AP000253.1-201ENST00000449339 ZNF429Q86V71 674 aa13.17□□□□□ -0.3
AP000253.1-201ENST00000449339 OR10A7Q8NGE5 316 aa13.17□□□□□ -0.3
AP000253.1-201ENST00000449339 RCC1LQ96I51 464 aaKnown RBP13.17□□□□□ -0.3
AP000253.1-201ENST00000449339 FGF7P21781 194 aa13.17□□□□□ -0.3
AP000253.1-201ENST00000449339 VWC2Q2TAL6 325 aa13.17□□□□□ -0.3
AP000253.1-201ENST00000449339 AWAT1Q58HT5 328 aa13.17□□□□□ -0.3
AP000253.1-201ENST00000449339 OR4A47Q6IF82 309 aa13.17□□□□□ -0.3
AP000253.1-201ENST00000449339 LCN15Q6UWW0 184 aa13.17□□□□□ -0.3
AP000253.1-201ENST00000449339 HEPN1Q6WQI6 88 aa13.17□□□□□ -0.3
AP000253.1-201ENST00000449339 MBD3L1Q8WWY6 194 aa13.17□□□□□ -0.3
AP000253.1-201ENST00000449339 CLCC1Q96S66 551 aa13.17□□□□□ -0.3
AP000253.1-201ENST00000449339 USP24Q9UPU5 2620 aa13.17□□□□□ -0.3
AP000253.1-201ENST00000449339 SCAF4O95104 1147 aaKnown RBP13.16□□□□□ -0.3
AP000253.1-201ENST00000449339 ARG1P05089 322 aa13.16□□□□□ -0.3
AP000253.1-201ENST00000449339 DAOP14920 347 aa13.16□□□□□ -0.3
AP000253.1-201ENST00000449339 ICAM4Q14773 271 aa13.16□□□□□ -0.3
AP000253.1-201ENST00000449339 LRRC10Q5BKY1 277 aa13.16□□□□□ -0.3
AP000253.1-201ENST00000449339 ZNF506Q5JVG8 444 aa13.16□□□□□ -0.3
AP000253.1-201ENST00000449339 SSX7Q7RTT5 188 aa13.16□□□□□ -0.3
AP000253.1-201ENST00000449339 LINC00518Q8N0U6 118 aa13.16□□□□□ -0.3
AP000253.1-201ENST00000449339 HEYLQ9NQ87 328 aaPredicted RBP13.16□□□□□ -0.3
AP000253.1-201ENST00000449339 CACNA1BQ00975 2339 aa13.16□□□□□ -0.3
AP000253.1-201ENST00000449339 A0A1W2PPR1 153 aa13.16□□□□□ -0.3
AP000253.1-201ENST00000449339 C15orf61A6NNL5 157 aa13.16□□□□□ -0.3
AP000253.1-201ENST00000449339 M0R036 132 aa13.16□□□□□ -0.3
AP000253.1-201ENST00000449339 IFNA10P01566 189 aa13.16□□□□□ -0.3
AP000253.1-201ENST00000449339 SOD3P08294 240 aa13.16□□□□□ -0.3
AP000253.1-201ENST00000449339 CT45A6P0DMU7 189 aa13.16□□□□□ -0.3
AP000253.1-201ENST00000449339 CT45A5P0DMU8 189 aa13.16□□□□□ -0.3
AP000253.1-201ENST00000449339 CT45A7P0DMV0 189 aa13.16□□□□□ -0.3
AP000253.1-201ENST00000449339 AKR1C3P42330 323 aa13.16□□□□□ -0.3
AP000253.1-201ENST00000449339 RPP30P78346 268 aaKnown RBP13.16□□□□□ -0.3
AP000253.1-201ENST00000449339 ZNF787Q6DD87 383 aa13.16□□□□□ -0.3
AP000253.1-201ENST00000449339 RXFP4Q8TDU9 374 aa13.16□□□□□ -0.3
AP000253.1-201ENST00000449339 C20orf24Q9BUV8 137 aa13.16□□□□□ -0.3
AP000253.1-201ENST00000449339 RPS10P5Q9NQ39 176 aa13.16□□□□□ -0.3
AP000253.1-201ENST00000449339 GNG13Q9P2W3 67 aa13.16□□□□□ -0.3
AP000253.1-201ENST00000449339 C19orf84I3L1E1 186 aa13.15□□□□□ -0.3
AP000253.1-201ENST00000449339 HSPB1P04792 205 aaKnown RBP13.15□□□□□ -0.3
AP000253.1-201ENST00000449339 SRP19P09132 144 aaKnown RBP13.15□□□□□ -0.3
AP000253.1-201ENST00000449339 PLA2G5P39877 138 aa13.15□□□□□ -0.3
AP000253.1-201ENST00000449339 VDAC2P45880 294 aaPredicted RBP13.15□□□□□ -0.3
AP000253.1-201ENST00000449339 AVPI1Q5T686 147 aa13.15□□□□□ -0.3
AP000253.1-201ENST00000449339 LURAP1LQ8IV03 231 aa13.15□□□□□ -0.3
AP000253.1-201ENST00000449339 RPP25LQ8N5L8 163 aaKnown RBP13.15□□□□□ -0.3
AP000253.1-201ENST00000449339 NPCDR1Q9BY65 106 aa13.15□□□□□ -0.3
AP000253.1-201ENST00000449339 UNKLQ9H9P5 680 aaKnown RBP13.15□□□□□ -0.3
AP000253.1-201ENST00000449339 TCF19Q9Y242 345 aa13.15□□□□□ -0.3
AP000253.1-201ENST00000449339 HRASP01112 189 aa13.15□□□□□ -0.31
AP000253.1-201ENST00000449339 IGKV1D-33P01593 117 aa13.15□□□□□ -0.31
AP000253.1-201ENST00000449339 IGKV1-33P01594 117 aa13.15□□□□□ -0.31
AP000253.1-201ENST00000449339 SNRNP70P08621 437 aaKnown RBP13.15□□□□□ -0.31
AP000253.1-201ENST00000449339 PPOXP50336 477 aa13.15□□□□□ -0.31
AP000253.1-201ENST00000449339 FGF8P55075 233 aaPredicted RBP13.15□□□□□ -0.31
AP000253.1-201ENST00000449339 KHDC3LQ587J8 217 aa13.15□□□□□ -0.31
AP000253.1-201ENST00000449339 ACSM6Q6P461 480 aa13.15□□□□□ -0.31
AP000253.1-201ENST00000449339 SMCO4Q9NRQ5 59 aa13.15□□□□□ -0.31
AP000253.1-201ENST00000449339 KAAG1Q9UBP8 84 aa13.15□□□□□ -0.31
AP000253.1-201ENST00000449339 C7orf77A4D0Y5 90 aa13.14□□□□□ -0.31
AP000253.1-201ENST00000449339 IGKV1-16P04430 117 aa13.14□□□□□ -0.31
AP000253.1-201ENST00000449339 MDKP21741 143 aaPredicted RBP13.14□□□□□ -0.31
AP000253.1-201ENST00000449339 HOXA1P49639 335 aaPredicted RBP13.14□□□□□ -0.31
AP000253.1-201ENST00000449339 CEBPGP53567 150 aa13.14□□□□□ -0.31
AP000253.1-201ENST00000449339 TMEM14BQ9NUH8 114 aa13.14□□□□□ -0.31
AP000253.1-201ENST00000449339 FOXA2Q9Y261 457 aaPredicted RBP13.14□□□□□ -0.31
AP000253.1-201ENST00000449339 MAP1LC3B2A6NCE7 125 aa13.13□□□□□ -0.31
AP000253.1-201ENST00000449339 ZFP92A6NM28 416 aa13.13□□□□□ -0.31
AP000253.1-201ENST00000449339 H7C2Y5 167 aa13.13□□□□□ -0.31
AP000253.1-201ENST00000449339 FBP1P09467 338 aa13.13□□□□□ -0.31
AP000253.1-201ENST00000449339 CD1BP29016 333 aa13.13□□□□□ -0.31
AP000253.1-201ENST00000449339 POU2AF1Q16633 256 aa13.13□□□□□ -0.31
AP000253.1-201ENST00000449339 RTL8BQ17RB0 113 aa13.13□□□□□ -0.31
AP000253.1-201ENST00000449339 ZNF833PQ6ZTB9 187 aa13.13□□□□□ -0.31
AP000253.1-201ENST00000449339 CYB561D1Q8N8Q1 229 aa13.13□□□□□ -0.31
AP000253.1-201ENST00000449339 ZNF709Q8N972 641 aa13.13□□□□□ -0.31
AP000253.1-201ENST00000449339 MAP1LC3BQ9GZQ8 125 aa13.13□□□□□ -0.31
AP000253.1-201ENST00000449339 SLC35D1Q9NTN3 355 aa13.13□□□□□ -0.31
AP000253.1-201ENST00000449339 CBLN4Q9NTU7 201 aa13.13□□□□□ -0.31
AP000253.1-201ENST00000449339 PUS1Q9Y606 427 aaKnown RBP eCLIP13.13□□□□□ -0.31
AP000253.1-201ENST00000449339 LOC102723971A0A1B0GUV8 181 aa13.13□□□□□ -0.31
AP000253.1-201ENST00000449339 RRHO14718 337 aa13.13□□□□□ -0.31
AP000253.1-201ENST00000449339 C11orf71Q6IPW1 123 aa13.13□□□□□ -0.31
AP000253.1-201ENST00000449339 ABHD12Q8N2K0 398 aa13.13□□□□□ -0.31
AP000253.1-201ENST00000449339 OR13D1Q8NGV5 346 aa13.13□□□□□ -0.31
AP000253.1-201ENST00000449339 SLC39A9Q9NUM3 307 aa13.13□□□□□ -0.31
AP000253.1-201ENST00000449339 MALRD1Q5VYJ5 2156 aa13.12□□□□□ -0.31
AP000253.1-201ENST00000449339 EIF3GO75821 320 aaKnown RBP eCLIP13.12□□□□□ -0.31
AP000253.1-201ENST00000449339 MBP02144 154 aa13.12□□□□□ -0.31
AP000253.1-201ENST00000449339 BCL2P10415 239 aa13.12□□□□□ -0.31
AP000253.1-201ENST00000449339 HSPE1P61604 102 aaKnown RBP13.12□□□□□ -0.31
AP000253.1-201ENST00000449339 KLF2Q9Y5W3 355 aaPredicted RBP13.12□□□□□ -0.31
AP000253.1-201ENST00000449339 C17orf112F2Z3M2 114 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms