RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 UTRNP46939 3433 aa4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 IGHV3OR16-13A0A075B7E8 117 aa4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 IGHV3-74A0A0B4J1X5 117 aa4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 IGHV2-70DA0A0C4DH43 119 aa4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 VAX1Q5SQQ9 334 aa4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 OR10A7Q8NGE5 316 aa4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 OR10AC1Q8NH08 325 aa4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 RAB24Q969Q5 203 aa4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 ELF5Q9UKW6 265 aaPredicted RBP4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 NCOA6Q14686 2063 aaPredicted RBP4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 IGHV3-66A0A0C4DH42 116 aa4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 SERTM2A0A1B0GWG4 89 aa4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 FBLL1A6NHQ2 334 aaKnown RBP4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 MT-ND4P03905 459 aa4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 IL7P13232 177 aa4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 MDKP21741 143 aaPredicted RBP4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 OR2F1Q13607 317 aa4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 WDR73Q6P4I2 378 aa4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 SETD2Q9BYW2 2564 aaPredicted RBP4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 COL4A3Q01955 1670 aa4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 CA1P00915 261 aaPredicted RBP4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 PMCHP20382 165 aa4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 LPAR6P43657 344 aa4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 UBA52P62987 128 aaKnown RBP4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 OPCMLQ14982 345 aa4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 PEA15Q15121 130 aa4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 LGALSLQ3ZCW2 172 aaPredicted RBP4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 ASPHD2Q6ICH7 369 aa4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 NANOGP1Q8N7R0 232 aa4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 ZDHHC22Q8N966 263 aa4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 OR1L4Q8NGR5 311 aa4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 TMEM167AQ8TBQ9 72 aa4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 CFHR4Q92496 578 aa4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 DDOQ99489 341 aa4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 TECRQ9NZ01 308 aaKnown RBP4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 SRRM5B3KS81 715 aa4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 SHISA9B4DS77 424 aa4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 HPGDSO60760 199 aa4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 ZNF85Q03923 595 aa4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 MRPL55Q7Z7F7 128 aaKnown RBP4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 ARHGAP5-AS1Q96IT6 56 aa4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 CLDN16Q9Y5I7 305 aa4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 IFITM5A6NNB3 132 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 WNT5AP41221 380 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 SNRPNP63162 240 aaKnown RBP4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 BLOC1S1P78537 153 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 DHODHQ02127 395 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 HCP5Q6MZN7 132 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 IDO2Q6ZQW0 420 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 TNFRSF14Q92956 283 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 U3KQK5 164 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 XKRY2A2RUG3 117 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 FAM90A10PA6NDY2 464 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 FAM90A18PA6NE21 464 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 FAM90A16PA6NEW6 464 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 FAM90A20PA6NIJ5 464 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 FAM90A8PA6NJQ4 464 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 FAM90A7PA6NKC0 464 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 FAM90A22PA8MWA6 464 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 FAM90A12PA8MX19 464 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 FAM90A5PA8MXJ8 464 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 FAM90A23PA8MXZ1 464 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 FAM90A15PP0C7V4 464 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 FAM90A13PP0C7W8 464 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 FAM90A14PP0C7W9 464 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 FAM90A24PP0C7X0 464 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 CHATP28329 748 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 UBE2E1P51965 193 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 UBE2G1P62253 170 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 IQCJQ1A5X6 159 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 PIGYQ3MUY2 71 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 MRPL52Q86TS9 123 aaKnown RBP4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 OR4A4PQ8NGN8 299 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 PPP1R3EQ9H7J1 279 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 DOK5Q9P104 306 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 E5RGE8 158 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 OR2F2O95006 317 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 GCGP01275 180 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 IGHV4-31P0DP07 118 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 TMEM187Q14656 261 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 WDR82Q6UXN9 313 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 OR13C6PQ8NH95 151 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 UBE2E2Q96LR5 201 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 SMCO4Q9NRQ5 59 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 NSG2Q9Y328 171 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 TRAV41A0A0B4J266 112 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 H7BYZ3 331 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 HIST1H1DP16402 221 aaKnown RBP4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 KLF17Q5JT82 389 aaPredicted RBP4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 HSD17B13Q7Z5P4 300 aaPredicted RBP4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 GPX8Q8TED1 209 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 RTN4IP1Q8WWV3 396 aaPredicted RBP4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 ARL6Q9H0F7 186 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 FBXL7Q9UJT9 491 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 KBTBD11-OT1A0A1B0GTJ5 212 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 SNRPGP15A8MWD9 76 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 RPL30P62888 115 aaKnown RBP4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 C16orf82Q7Z2V1 217 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 OR13F1Q8NGS4 319 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 OR13C8Q8NGS7 320 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms