RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 CXorf58Q96LI9 332 aa10.01□□□□□ -0.81
HMGB3-204ENST00000448905 RBMX2Q9Y388 322 aaKnown RBP10.01□□□□□ -0.81
HMGB3-204ENST00000448905 LOC102724200A0A096LPH7 203 aaPredicted RBP10□□□□□ -0.81
HMGB3-204ENST00000448905 TRBV7-1A0A0A6YYK4 115 aa10□□□□□ -0.81
HMGB3-204ENST00000448905 HMX3A6NHT5 357 aa10□□□□□ -0.81
HMGB3-204ENST00000448905 CYB5BO43169 146 aa10□□□□□ -0.81
HMGB3-204ENST00000448905 SCGNO76038 276 aa10□□□□□ -0.81
HMGB3-204ENST00000448905 HLA-AP01891 365 aaKnown RBP10□□□□□ -0.81
HMGB3-204ENST00000448905 NFYAP23511 347 aaPredicted RBP10□□□□□ -0.81
HMGB3-204ENST00000448905 CRHBPP24387 322 aa10□□□□□ -0.81
HMGB3-204ENST00000448905 CNIH2Q6PI25 160 aa10□□□□□ -0.81
HMGB3-204ENST00000448905 CLEC19AQ6UXS0 136 aa10□□□□□ -0.81
HMGB3-204ENST00000448905 UXS1Q8NBZ7 420 aa10□□□□□ -0.81
HMGB3-204ENST00000448905 TMEM167AQ8TBQ9 72 aa10□□□□□ -0.81
HMGB3-204ENST00000448905 TCTEX1D2Q8WW35 142 aa10□□□□□ -0.81
HMGB3-204ENST00000448905 MARC2Q969Z3 335 aa10□□□□□ -0.81
HMGB3-204ENST00000448905 GGTLC1Q9BX51 225 aa10□□□□□ -0.81
HMGB3-204ENST00000448905 THYN1Q9P016 225 aa10□□□□□ -0.81
HMGB3-204ENST00000448905 TRAV25A0A0B4J276 109 aa9.99□□□□□ -0.81
HMGB3-204ENST00000448905 KBTBD11O94819 623 aa9.99□□□□□ -0.81
HMGB3-204ENST00000448905 CLEC3BP05452 202 aa9.99□□□□□ -0.81
HMGB3-204ENST00000448905 CRYGCP07315 174 aa9.99□□□□□ -0.81
HMGB3-204ENST00000448905 GALP22466 123 aa9.99□□□□□ -0.81
HMGB3-204ENST00000448905 PSMB6P28072 239 aa9.99□□□□□ -0.81
HMGB3-204ENST00000448905 OR10A3P58181 314 aa9.99□□□□□ -0.81
HMGB3-204ENST00000448905 OR2B11Q5JQS5 317 aa9.99□□□□□ -0.81
HMGB3-204ENST00000448905 C10orf55Q5SWW7 151 aa9.99□□□□□ -0.81
HMGB3-204ENST00000448905 HACD4Q5VWC8 232 aa9.99□□□□□ -0.81
HMGB3-204ENST00000448905 ZNF66Q6ZN08 573 aa9.99□□□□□ -0.81
HMGB3-204ENST00000448905 SLC38A6Q8IZM9 456 aa9.99□□□□□ -0.81
HMGB3-204ENST00000448905 VKORC1L1Q8N0U8 176 aa9.99□□□□□ -0.81
HMGB3-204ENST00000448905 MFSD4AQ8N468 514 aa9.99□□□□□ -0.81
HMGB3-204ENST00000448905 BLOC1S6Q9UL45 172 aa9.99□□□□□ -0.81
HMGB3-204ENST00000448905 SPATA2Q9UM82 520 aa9.99□□□□□ -0.81
HMGB3-204ENST00000448905 DMRT1Q9Y5R6 373 aa9.99□□□□□ -0.81
HMGB3-204ENST00000448905 IGKV1D-8A0A087WSZ0 117 aa9.98□□□□□ -0.81
HMGB3-204ENST00000448905 TRDV1A0A1B0GX56 115 aa9.98□□□□□ -0.81
HMGB3-204ENST00000448905 CXorf65A6NEN9 183 aa9.98□□□□□ -0.81
HMGB3-204ENST00000448905 TEX22C9J3V5 150 aa9.98□□□□□ -0.81
HMGB3-204ENST00000448905 NDUFB8O95169 186 aa9.98□□□□□ -0.81
HMGB3-204ENST00000448905 IL6RP08887 468 aaPredicted RBP9.98□□□□□ -0.81
HMGB3-204ENST00000448905 ZNF735P0CB33 412 aa9.98□□□□□ -0.81
HMGB3-204ENST00000448905 RPL30P62888 115 aaKnown RBP9.98□□□□□ -0.81
HMGB3-204ENST00000448905 RPL8P62917 257 aaKnown RBP9.98□□□□□ -0.81
HMGB3-204ENST00000448905 ZNF367Q7RTV3 350 aa9.98□□□□□ -0.81
HMGB3-204ENST00000448905 OR4A5Q8NH83 315 aa9.98□□□□□ -0.81
HMGB3-204ENST00000448905 MRPL27Q9P0M9 148 aaKnown RBP9.98□□□□□ -0.81
HMGB3-204ENST00000448905 UFC1Q9Y3C8 167 aa9.98□□□□□ -0.81
HMGB3-204ENST00000448905 SCAF4O95104 1147 aaKnown RBP9.97□□□□□ -0.81
HMGB3-204ENST00000448905 IGHV3-23P01764 117 aa9.97□□□□□ -0.81
HMGB3-204ENST00000448905 MYOD1P15172 320 aa9.97□□□□□ -0.81
HMGB3-204ENST00000448905 APOC4P55056 127 aa9.97□□□□□ -0.81
HMGB3-204ENST00000448905 GNG2P59768 71 aa9.97□□□□□ -0.81
HMGB3-204ENST00000448905 TMEM61Q8N0U2 210 aa9.97□□□□□ -0.81
HMGB3-204ENST00000448905 PUSL1Q8N0Z8 303 aaKnown RBP9.97□□□□□ -0.81
HMGB3-204ENST00000448905 OR1L6Q8NGR2 347 aa9.97□□□□□ -0.81
HMGB3-204ENST00000448905 FANCD2OSQ96PS1 177 aa9.97□□□□□ -0.81
HMGB3-204ENST00000448905 OVOL2Q9BRP0 275 aa9.97□□□□□ -0.81
HMGB3-204ENST00000448905 KRTAP17-1Q9BYP8 105 aa9.97□□□□□ -0.81
HMGB3-204ENST00000448905 WFDC10AQ9H1F0 79 aa9.97□□□□□ -0.81
HMGB3-204ENST00000448905 VCX3BQ9H321 246 aa9.97□□□□□ -0.81
HMGB3-204ENST00000448905 HRASLSQ9HDD0 168 aa9.97□□□□□ -0.81
HMGB3-204ENST00000448905 ANXA10Q9UJ72 324 aa9.97□□□□□ -0.81
HMGB3-204ENST00000448905 A8MWP6 167 aa9.96□□□□□ -0.82
HMGB3-204ENST00000448905 UBE2CO00762 179 aa9.96□□□□□ -0.82
HMGB3-204ENST00000448905 LY6G6CO95867 125 aa9.96□□□□□ -0.82
HMGB3-204ENST00000448905 CTRB1P17538 263 aa9.96□□□□□ -0.82
HMGB3-204ENST00000448905 HLA-GP17693 338 aa9.96□□□□□ -0.82
HMGB3-204ENST00000448905 AQP4P55087 323 aa9.96□□□□□ -0.82
HMGB3-204ENST00000448905 ELLP55199 621 aaPredicted RBP9.96□□□□□ -0.82
HMGB3-204ENST00000448905 TBCEQ15813 527 aaPredicted RBP9.96□□□□□ -0.82
HMGB3-204ENST00000448905 KLK9Q2XQG4 91 aa9.96□□□□□ -0.82
HMGB3-204ENST00000448905 ZNF585BQ52M93 769 aa9.96□□□□□ -0.82
HMGB3-204ENST00000448905 TM4SF20Q53R12 229 aa9.96□□□□□ -0.82
HMGB3-204ENST00000448905 CTRB2Q6GPI1 263 aa9.96□□□□□ -0.82
HMGB3-204ENST00000448905 LAMTOR1Q6IAA8 161 aa9.96□□□□□ -0.82
HMGB3-204ENST00000448905 PLET1Q6UQ28 207 aa9.96□□□□□ -0.82
HMGB3-204ENST00000448905 SSX9Q7RTT3 188 aa9.96□□□□□ -0.82
HMGB3-204ENST00000448905 OR2C3Q8N628 320 aa9.96□□□□□ -0.82
HMGB3-204ENST00000448905 ZBTB34Q8NCN2 500 aa9.96□□□□□ -0.82
HMGB3-204ENST00000448905 COMMD5Q9GZQ3 224 aa9.96□□□□□ -0.82
HMGB3-204ENST00000448905 NDUFB11Q9NX14 153 aa9.96□□□□□ -0.82
HMGB3-204ENST00000448905 TAS2R8Q9NYW2 309 aa9.96□□□□□ -0.82
HMGB3-204ENST00000448905 MLXQ9UH92 298 aa9.96□□□□□ -0.82
HMGB3-204ENST00000448905 KLK9Q9UKQ9 250 aa9.96□□□□□ -0.82
HMGB3-204ENST00000448905 ELF5Q9UKW6 265 aaPredicted RBP9.96□□□□□ -0.82
HMGB3-204ENST00000448905 TP53TG1Q9Y2A0 90 aa9.96□□□□□ -0.82
HMGB3-204ENST00000448905 PLECQ15149 4684 aaKnown RBP9.95□□□□□ -0.82
HMGB3-204ENST00000448905 TMEM213A2RRL7 107 aa9.95□□□□□ -0.82
HMGB3-204ENST00000448905 NUPR2A6NF83 97 aa9.95□□□□□ -0.82
HMGB3-204ENST00000448905 NOTOA8MTQ0 251 aa9.95□□□□□ -0.82
HMGB3-204ENST00000448905 E7EUB6 86 aa9.95□□□□□ -0.82
HMGB3-204ENST00000448905 IGLV2-14P01704 120 aa9.95□□□□□ -0.82
HMGB3-204ENST00000448905 AREGP15514 252 aa9.95□□□□□ -0.82
HMGB3-204ENST00000448905 BMI1P35226 326 aa9.95□□□□□ -0.82
HMGB3-204ENST00000448905 ARPC4P59998 168 aa9.95□□□□□ -0.82
HMGB3-204ENST00000448905 MSMO1Q15800 293 aa9.95□□□□□ -0.82
HMGB3-204ENST00000448905 C22orf42Q6IC83 251 aa9.95□□□□□ -0.82
HMGB3-204ENST00000448905 Q6ZWC4 215 aa9.95□□□□□ -0.82
HMGB3-204ENST00000448905 TPRA1Q86W33 373 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms