RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 COMMD1Q8N668 190 aa12.2□□□□□ -0.46
SF1-211ENST00000448404 CCL17Q92583 94 aa12.2□□□□□ -0.46
SF1-211ENST00000448404 DSCAML1Q8TD84 2053 aa12.2□□□□□ -0.46
SF1-211ENST00000448404 ARHGAP32A7KAX9 2087 aa12.2□□□□□ -0.46
SF1-211ENST00000448404 IGLV3-9A0A075B6K5 115 aa12.2□□□□□ -0.46
SF1-211ENST00000448404 C15orf62A8K5M9 175 aa12.2□□□□□ -0.46
SF1-211ENST00000448404 CRYABP02511 175 aaKnown RBP12.2□□□□□ -0.46
SF1-211ENST00000448404 SOD3P08294 240 aa12.2□□□□□ -0.46
SF1-211ENST00000448404 RHEBQ15382 184 aa12.2□□□□□ -0.46
SF1-211ENST00000448404 LHX4Q969G2 390 aa12.2□□□□□ -0.46
SF1-211ENST00000448404 SDSLQ96GA7 329 aa12.2□□□□□ -0.46
SF1-211ENST00000448404 PATZ1Q9HBE1 687 aaKnown RBP12.2□□□□□ -0.46
SF1-211ENST00000448404 MALRD1Q5VYJ5 2156 aa12.2□□□□□ -0.46
SF1-211ENST00000448404 IFNA10P01566 189 aa12.19□□□□□ -0.46
SF1-211ENST00000448404 IGKV1-16P04430 117 aa12.19□□□□□ -0.46
SF1-211ENST00000448404 CXCL1P09341 107 aa12.19□□□□□ -0.46
SF1-211ENST00000448404 C1QL4Q86Z23 238 aa12.19□□□□□ -0.46
SF1-211ENST00000448404 LFNGQ8NES3 379 aa12.19□□□□□ -0.46
SF1-211ENST00000448404 GAFA1Q96PS6 74 aa12.19□□□□□ -0.46
SF1-211ENST00000448404 RNF7Q9UBF6 113 aa12.19□□□□□ -0.46
SF1-211ENST00000448404 TGIF2-C20orf24A0A0A6YYL0 155 aa12.19□□□□□ -0.46
SF1-211ENST00000448404 LOC102723971A0A1B0GUV8 181 aa12.19□□□□□ -0.46
SF1-211ENST00000448404 FABP4P15090 132 aa12.19□□□□□ -0.46
SF1-211ENST00000448404 NBL1P41271 181 aa12.19□□□□□ -0.46
SF1-211ENST00000448404 TDGF1P3P51864 188 aa12.19□□□□□ -0.46
SF1-211ENST00000448404 DIAPH2-AS1Q14236 149 aa12.19□□□□□ -0.46
SF1-211ENST00000448404 KHDC3LQ587J8 217 aa12.19□□□□□ -0.46
SF1-211ENST00000448404 FFAR4Q5NUL3 377 aa12.19□□□□□ -0.46
SF1-211ENST00000448404 MOB3BQ86TA1 216 aa12.19□□□□□ -0.46
SF1-211ENST00000448404 TGIF2LXQ8IUE1 241 aa12.19□□□□□ -0.46
SF1-211ENST00000448404 OR5T1Q8NG75 326 aa12.19□□□□□ -0.46
SF1-211ENST00000448404 OR10P1Q8NGE3 313 aa12.19□□□□□ -0.46
SF1-211ENST00000448404 TMEM170AQ8WVE7 144 aa12.19□□□□□ -0.46
SF1-211ENST00000448404 SFXN3Q9BWM7 321 aa12.19□□□□□ -0.46
SF1-211ENST00000448404 LYNX1G3V0Z9 82 aa12.18□□□□□ -0.46
SF1-211ENST00000448404 PRRG2O14669 202 aa12.18□□□□□ -0.46
SF1-211ENST00000448404 LYNX1P0DP58 116 aa12.18□□□□□ -0.46
SF1-211ENST00000448404 GZMHP20718 246 aa12.18□□□□□ -0.46
SF1-211ENST00000448404 GRNP28799 593 aaKnown RBP12.18□□□□□ -0.46
SF1-211ENST00000448404 ADIPOQQ15848 244 aa12.18□□□□□ -0.46
SF1-211ENST00000448404 ZNF506Q5JVG8 444 aa12.18□□□□□ -0.46
SF1-211ENST00000448404 FAM90A2PQ658T7 463 aa12.18□□□□□ -0.46
SF1-211ENST00000448404 RPUSD4Q96CM3 377 aaKnown RBP12.18□□□□□ -0.46
SF1-211ENST00000448404 RBM14Q96PK6 669 aaKnown RBP12.18□□□□□ -0.46
SF1-211ENST00000448404 HSD17B10Q99714 261 aaKnown RBP12.18□□□□□ -0.46
SF1-211ENST00000448404 TMEM140Q9NV12 185 aa12.18□□□□□ -0.46
SF1-211ENST00000448404 OR6C3Q9NZP0 311 aa12.18□□□□□ -0.46
SF1-211ENST00000448404 VPS13CQ709C8 3753 aa12.18□□□□□ -0.46
SF1-211ENST00000448404 A0A1B0GWJ7 208 aa12.18□□□□□ -0.46
SF1-211ENST00000448404 HIST1H2BKO60814 126 aa12.18□□□□□ -0.46
SF1-211ENST00000448404 HIST1H2BJP06899 126 aa12.18□□□□□ -0.46
SF1-211ENST00000448404 HIST1H2BOP23527 126 aa12.18□□□□□ -0.46
SF1-211ENST00000448404 HIST1H2BBP33778 126 aa12.18□□□□□ -0.46
SF1-211ENST00000448404 HIST1H2BDP58876 126 aa12.18□□□□□ -0.46
SF1-211ENST00000448404 UBE2G2P60604 165 aa12.18□□□□□ -0.46
SF1-211ENST00000448404 HIST1H2BCP62807 126 aa12.18□□□□□ -0.46
SF1-211ENST00000448404 HIST2H2BEQ16778 126 aa12.18□□□□□ -0.46
SF1-211ENST00000448404 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.18□□□□□ -0.46
SF1-211ENST00000448404 LYPD2Q6UXB3 125 aa12.18□□□□□ -0.46
SF1-211ENST00000448404 HIST1H2BHQ93079 126 aa12.18□□□□□ -0.46
SF1-211ENST00000448404 HIST1H2BNQ99877 126 aa12.18□□□□□ -0.46
SF1-211ENST00000448404 HIST1H2BMQ99879 126 aa12.18□□□□□ -0.46
SF1-211ENST00000448404 HEYLQ9NQ87 328 aaPredicted RBP12.18□□□□□ -0.46
SF1-211ENST00000448404 SLC39A9Q9NUM3 307 aa12.18□□□□□ -0.46
SF1-211ENST00000448404 ZFHX3Q15911 3703 aa12.18□□□□□ -0.46
SF1-211ENST00000448404 TSTD3H0UI37 97 aa12.18□□□□□ -0.46
SF1-211ENST00000448404 C16orf97H3BN30 126 aa12.18□□□□□ -0.46
SF1-211ENST00000448404 ADH4P08319 380 aa12.18□□□□□ -0.46
SF1-211ENST00000448404 WNT2P09544 360 aa12.18□□□□□ -0.46
SF1-211ENST00000448404 BCL2P10415 239 aa12.18□□□□□ -0.46
SF1-211ENST00000448404 HTD2P86397 168 aa12.18□□□□□ -0.46
SF1-211ENST00000448404 SSMEM1Q8WWF3 244 aa12.18□□□□□ -0.46
SF1-211ENST00000448404 RAB29O14966 203 aa12.17□□□□□ -0.46
SF1-211ENST00000448404 PPP1R2P9O14990 202 aa12.17□□□□□ -0.46
SF1-211ENST00000448404 TCAPO15273 167 aa12.17□□□□□ -0.46
SF1-211ENST00000448404 TMEM41BQ5BJD5 291 aa12.17□□□□□ -0.46
SF1-211ENST00000448404 STUMQ69YW2 141 aa12.17□□□□□ -0.46
SF1-211ENST00000448404 ZBTB34Q8NCN2 500 aa12.17□□□□□ -0.46
SF1-211ENST00000448404 OR10G4Q8NGN3 311 aa12.17□□□□□ -0.46
SF1-211ENST00000448404 OR10G9Q8NGN4 311 aa12.17□□□□□ -0.46
SF1-211ENST00000448404 OR10G7Q8NGN6 311 aa12.17□□□□□ -0.46
SF1-211ENST00000448404 OR4A16Q8NH70 328 aa12.17□□□□□ -0.46
SF1-211ENST00000448404 Q8WTZ3 238 aa12.17□□□□□ -0.46
SF1-211ENST00000448404 WFIKKN1Q96NZ8 548 aa12.17□□□□□ -0.46
SF1-211ENST00000448404 S1PR3Q99500 378 aa12.17□□□□□ -0.46
SF1-211ENST00000448404 NPCDR1Q9BY65 106 aa12.17□□□□□ -0.46
SF1-211ENST00000448404 CELSR1Q9NYQ6 3014 aa12.17□□□□□ -0.46
SF1-211ENST00000448404 PLAUP00749 431 aa12.17□□□□□ -0.46
SF1-211ENST00000448404 TRGC2P03986 189 aa12.17□□□□□ -0.46
SF1-211ENST00000448404 SNRPCP09234 159 aaKnown RBP12.17□□□□□ -0.46
SF1-211ENST00000448404 SPCS3P61009 180 aa12.17□□□□□ -0.46
SF1-211ENST00000448404 PKIAP61925 76 aa12.17□□□□□ -0.46
SF1-211ENST00000448404 C4orf17Q53FE4 359 aa12.17□□□□□ -0.46
SF1-211ENST00000448404 ZNF66Q6ZN08 573 aa12.17□□□□□ -0.46
SF1-211ENST00000448404 NECAP1Q8NC96 275 aa12.17□□□□□ -0.46
SF1-211ENST00000448404 OR51G1Q8NGK1 321 aa12.17□□□□□ -0.46
SF1-211ENST00000448404 YPEL4Q96NS1 127 aa12.17□□□□□ -0.46
SF1-211ENST00000448404 CACNA1BQ00975 2339 aa12.16□□□□□ -0.46
SF1-211ENST00000448404 SRRM4A7MD48 611 aaKnown RBP12.16□□□□□ -0.46
SF1-211ENST00000448404 SEC14L6B5MCN3 397 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms