RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 HSPB11Q9Y547 144 aa2.43□□□□□ -2.02
PMS1-216ENST00000447734 ROBO3Q96MS0 1386 aa2.43□□□□□ -2.02
PMS1-216ENST00000447734 RPRD2Q5VT52 1461 aaKnown RBP2.43□□□□□ -2.02
PMS1-216ENST00000447734 CEP170Q5SW79 1584 aa2.43□□□□□ -2.02
PMS1-216ENST00000447734 HECW2Q9P2P5 1572 aa2.43□□□□□ -2.02
PMS1-216ENST00000447734 DOCK5Q9H7D0 1870 aa2.43□□□□□ -2.02
PMS1-216ENST00000447734 MIA2Q96PC5 1412 aa2.42□□□□□ -2.02
PMS1-216ENST00000447734 CDC42BPBQ9Y5S2 1711 aa2.42□□□□□ -2.02
PMS1-216ENST00000447734 PCM1Q15154 2024 aa2.42□□□□□ -2.02
PMS1-216ENST00000447734 NUP205Q92621 2012 aa2.42□□□□□ -2.02
PMS1-216ENST00000447734 DSCAML1Q8TD84 2053 aa2.42□□□□□ -2.02
PMS1-216ENST00000447734 TRAV9-1A0A075B6T8 112 aa2.42□□□□□ -2.02
PMS1-216ENST00000447734 A0A0B4J2C4 111 aa2.42□□□□□ -2.02
PMS1-216ENST00000447734 ZNF324O75467 553 aaPredicted RBP2.42□□□□□ -2.02
PMS1-216ENST00000447734 SRP19P09132 144 aaKnown RBP2.42□□□□□ -2.02
PMS1-216ENST00000447734 LGALS1P09382 135 aaKnown RBP2.42□□□□□ -2.02
PMS1-216ENST00000447734 SMIM17P0DL12 118 aa2.42□□□□□ -2.02
PMS1-216ENST00000447734 SMIM10L2AP0DMW4 78 aa2.42□□□□□ -2.02
PMS1-216ENST00000447734 SMIM10L2BP0DMW5 78 aa2.42□□□□□ -2.02
PMS1-216ENST00000447734 CRYBB3P26998 211 aa2.42□□□□□ -2.02
PMS1-216ENST00000447734 RAB13P51153 203 aa2.42□□□□□ -2.02
PMS1-216ENST00000447734 TSPEAR-AS2P59090 65 aa2.42□□□□□ -2.02
PMS1-216ENST00000447734 RPL30P62888 115 aaKnown RBP2.42□□□□□ -2.02
PMS1-216ENST00000447734 FKBP1AP62942 108 aaKnown RBP2.42□□□□□ -2.02
PMS1-216ENST00000447734 HBA1P69905 142 aa2.42□□□□□ -2.02
PMS1-216ENST00000447734 RHEBQ15382 184 aa2.42□□□□□ -2.02
PMS1-216ENST00000447734 C2orf83Q53S99 150 aa2.42□□□□□ -2.02
PMS1-216ENST00000447734 TMEM78Q5T7P6 136 aa2.42□□□□□ -2.02
PMS1-216ENST00000447734 SLC25A40Q8TBP6 338 aa2.42□□□□□ -2.02
PMS1-216ENST00000447734 SKA2Q8WVK7 121 aaPredicted RBP2.42□□□□□ -2.02
PMS1-216ENST00000447734 C20orf27Q9GZN8 174 aa2.42□□□□□ -2.02
PMS1-216ENST00000447734 VCXQ9H320 206 aa2.42□□□□□ -2.02
PMS1-216ENST00000447734 OR5V1Q9UGF6 321 aa2.42□□□□□ -2.02
PMS1-216ENST00000447734 TP53TG3Q9ULZ0 132 aa2.42□□□□□ -2.02
PMS1-216ENST00000447734 CYSLTR1Q9Y271 337 aa2.42□□□□□ -2.02
PMS1-216ENST00000447734 U3KQK5 164 aa2.42□□□□□ -2.02
PMS1-216ENST00000447734 DOCK3Q8IZD9 2030 aa2.42□□□□□ -2.02
PMS1-216ENST00000447734 BRWD3Q6RI45 1802 aa2.42□□□□□ -2.02
PMS1-216ENST00000447734 YTHDC2Q9H6S0 1430 aaKnown RBP2.42□□□□□ -2.02
PMS1-216ENST00000447734 IGSF23A1L1A6 192 aa2.41□□□□□ -2.02
PMS1-216ENST00000447734 C7orf66A4D0T2 115 aa2.41□□□□□ -2.02
PMS1-216ENST00000447734 DPRXA6NFQ7 191 aa2.41□□□□□ -2.02
PMS1-216ENST00000447734 I3L521 148 aa2.41□□□□□ -2.02
PMS1-216ENST00000447734 SLC17A3O00476 420 aa2.41□□□□□ -2.02
PMS1-216ENST00000447734 LECT2O14960 151 aa2.41□□□□□ -2.02
PMS1-216ENST00000447734 BET1O15155 118 aa2.41□□□□□ -2.02
PMS1-216ENST00000447734 IGHV3-30-3P0DP02 117 aa2.41□□□□□ -2.02
PMS1-216ENST00000447734 SCGB1A1P11684 91 aa2.41□□□□□ -2.02
PMS1-216ENST00000447734 NPPCP23582 126 aa2.41□□□□□ -2.02
PMS1-216ENST00000447734 SERPINB10P48595 397 aa2.41□□□□□ -2.02
PMS1-216ENST00000447734 TPI1P60174 286 aa2.41□□□□□ -2.02
PMS1-216ENST00000447734 ZNF616Q08AN1 781 aa2.41□□□□□ -2.02
PMS1-216ENST00000447734 TMEM128Q5BJH2 165 aa2.41□□□□□ -2.02
PMS1-216ENST00000447734 LDLRAD2Q5SZI1 272 aa2.41□□□□□ -2.02
PMS1-216ENST00000447734 SLC25A34Q6PIV7 304 aa2.41□□□□□ -2.02
PMS1-216ENST00000447734 LYZL2Q7Z4W2 148 aa2.41□□□□□ -2.02
PMS1-216ENST00000447734 OSR2Q8N2R0 312 aa2.41□□□□□ -2.02
PMS1-216ENST00000447734 C12orf45Q8N5I9 185 aaPredicted RBP2.41□□□□□ -2.02
PMS1-216ENST00000447734 C3orf22Q8N5N4 141 aa2.41□□□□□ -2.02
PMS1-216ENST00000447734 EIF4E3Q8N5X7 224 aaKnown RBP2.41□□□□□ -2.02
PMS1-216ENST00000447734 ST20-AS1Q8NBB2 130 aa2.41□□□□□ -2.02
PMS1-216ENST00000447734 APCDD1LQ8NCL9 501 aa2.41□□□□□ -2.02
PMS1-216ENST00000447734 BPIFB6Q8NFQ5 453 aa2.41□□□□□ -2.02
PMS1-216ENST00000447734 CD200R1Q8TD46 325 aa2.41□□□□□ -2.02
PMS1-216ENST00000447734 RPS4Y2Q8TD47 263 aa2.41□□□□□ -2.02
PMS1-216ENST00000447734 SLC7A6Q92536 515 aa2.41□□□□□ -2.02
PMS1-216ENST00000447734 RNASE6Q93091 150 aaKnown RBP2.41□□□□□ -2.02
PMS1-216ENST00000447734 MGLLQ99685 303 aa2.41□□□□□ -2.02
PMS1-216ENST00000447734 SPIN2AQ99865 258 aa2.41□□□□□ -2.02
PMS1-216ENST00000447734 SPIN2BQ9BPZ2 258 aa2.41□□□□□ -2.02
PMS1-216ENST00000447734 TVP23BQ9NYZ1 205 aa2.41□□□□□ -2.02
PMS1-216ENST00000447734 CABIN1Q9Y6J0 2220 aa2.41□□□□□ -2.02
PMS1-216ENST00000447734 BAZ1BQ9UIG0 1483 aaKnown RBP2.4□□□□□ -2.02
PMS1-216ENST00000447734 IGKV1OR2-108A0A075B7D4 117 aa2.4□□□□□ -2.03
PMS1-216ENST00000447734 A0A087WUU8 490 aa2.4□□□□□ -2.03
PMS1-216ENST00000447734 TMEM269A0A1B0GVZ9 245 aa2.4□□□□□ -2.03
PMS1-216ENST00000447734 PRORSD1PA6NEY8 169 aa2.4□□□□□ -2.03
PMS1-216ENST00000447734 SIGLEC16A6NMB1 481 aa2.4□□□□□ -2.03
PMS1-216ENST00000447734 A8MUU9 505 aa2.4□□□□□ -2.03
PMS1-216ENST00000447734 CLDN25C9JDP6 229 aa2.4□□□□□ -2.03
PMS1-216ENST00000447734 GAS8-AS1O95177 125 aa2.4□□□□□ -2.03
PMS1-216ENST00000447734 WISP3O95389 354 aaPredicted RBP2.4□□□□□ -2.03
PMS1-216ENST00000447734 IFNA7P01567 189 aa2.4□□□□□ -2.03
PMS1-216ENST00000447734 MUC1P15941 1255 aaPredicted RBP2.4□□□□□ -2.03
PMS1-216ENST00000447734 SLC25A16P16260 332 aa2.4□□□□□ -2.03
PMS1-216ENST00000447734 S100A7P31151 101 aa2.4□□□□□ -2.03
PMS1-216ENST00000447734 GABRA2P47869 451 aa2.4□□□□□ -2.03
PMS1-216ENST00000447734 ATP5G3P48201 142 aa2.4□□□□□ -2.03
PMS1-216ENST00000447734 RWDD2BP57060 319 aa2.4□□□□□ -2.03
PMS1-216ENST00000447734 KRTAP10-5P60370 271 aa2.4□□□□□ -2.03
PMS1-216ENST00000447734 EIF4EBP2Q13542 120 aaPredicted RBP2.4□□□□□ -2.03
PMS1-216ENST00000447734 LINC00483Q53H64 154 aa2.4□□□□□ -2.03
PMS1-216ENST00000447734 SAMD13Q5VXD3 122 aa2.4□□□□□ -2.03
PMS1-216ENST00000447734 Q6Q795 121 aa2.4□□□□□ -2.03
PMS1-216ENST00000447734 RASL11AQ6T310 242 aa2.4□□□□□ -2.03
PMS1-216ENST00000447734 C16orf47Q6ZP98 133 aaPredicted RBP2.4□□□□□ -2.03
PMS1-216ENST00000447734 SSX8Q7RTT4 187 aa2.4□□□□□ -2.03
PMS1-216ENST00000447734 ZNF695Q8IW36 515 aa2.4□□□□□ -2.03
PMS1-216ENST00000447734 FNDC9Q8TBE3 224 aa2.4□□□□□ -2.03
PMS1-216ENST00000447734 TOMM6Q96B49 74 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms