RNA–Protein interactions for RNA: ENST00000447439.6

KLHL3-202, Transcript of kelch like family member 3, humanhuman

TSL 1 (best)

Gene KLHL3, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-202ENST00000447439 FAM78BQ5VT40 261 aa7.78□□□□□ -1.16
KLHL3-202ENST00000447439 TREML4Q6UXN2 200 aa7.78□□□□□ -1.16
KLHL3-202ENST00000447439 FAM90A1Q86YD7 464 aa7.78□□□□□ -1.16
KLHL3-202ENST00000447439 NEIL1Q96FI4 390 aaPredicted RBP7.78□□□□□ -1.16
KLHL3-202ENST00000447439 PACRGQ96M98 296 aaPredicted RBP7.78□□□□□ -1.16
KLHL3-202ENST00000447439 CIB3Q96Q77 187 aaPredicted RBP7.78□□□□□ -1.16
KLHL3-202ENST00000447439 S1PR3Q99500 378 aa7.78□□□□□ -1.16
KLHL3-202ENST00000447439 MRPL37Q9BZE1 423 aaKnown RBP7.78□□□□□ -1.16
KLHL3-202ENST00000447439 TMEM242Q9NWH2 141 aa7.78□□□□□ -1.16
KLHL3-202ENST00000447439 CALYQ9NYX4 217 aa7.78□□□□□ -1.16
KLHL3-202ENST00000447439 CEP250Q9BV73 2442 aa7.78□□□□□ -1.16
KLHL3-202ENST00000447439 TRBV24-1A0A075B6N3 115 aa7.78□□□□□ -1.16
KLHL3-202ENST00000447439 A0A1W2PPV4 95 aa7.78□□□□□ -1.16
KLHL3-202ENST00000447439 FOXH1O75593 365 aa7.78□□□□□ -1.16
KLHL3-202ENST00000447439 THBS3P49746 956 aa7.78□□□□□ -1.16
KLHL3-202ENST00000447439 GNB2P62879 340 aa7.78□□□□□ -1.16
KLHL3-202ENST00000447439 RELBQ01201 579 aa7.78□□□□□ -1.16
KLHL3-202ENST00000447439 FAM27E3Q08E93 113 aa7.78□□□□□ -1.16
KLHL3-202ENST00000447439 PMS2P11Q13670 270 aa7.78□□□□□ -1.16
KLHL3-202ENST00000447439 VWC2Q2TAL6 325 aa7.78□□□□□ -1.16
KLHL3-202ENST00000447439 CT45A1Q5HYN5 189 aa7.78□□□□□ -1.16
KLHL3-202ENST00000447439 LYG1Q8N1E2 194 aa7.78□□□□□ -1.16
KLHL3-202ENST00000447439 FAM216BQ8N7L0 139 aa7.78□□□□□ -1.16
KLHL3-202ENST00000447439 CT45A3Q8NHU0 189 aa7.78□□□□□ -1.16
KLHL3-202ENST00000447439 C1orf159Q96HA4 380 aa7.78□□□□□ -1.16
KLHL3-202ENST00000447439 OR5B12Q96R08 314 aa7.78□□□□□ -1.16
KLHL3-202ENST00000447439 CCL13Q99616 98 aa7.78□□□□□ -1.16
KLHL3-202ENST00000447439 PRDM13Q9H4Q3 707 aa7.78□□□□□ -1.16
KLHL3-202ENST00000447439 WDR83OSQ9Y284 106 aa7.78□□□□□ -1.16
KLHL3-202ENST00000447439 SAA2-SAA4A0A096LPE2 208 aa7.77□□□□□ -1.16
KLHL3-202ENST00000447439 XKRY2A2RUG3 117 aa7.77□□□□□ -1.16
KLHL3-202ENST00000447439 C17orf112F2Z3M2 114 aa7.77□□□□□ -1.16
KLHL3-202ENST00000447439 GFRA3O60609 400 aa7.77□□□□□ -1.16
KLHL3-202ENST00000447439 HPRT1P00492 218 aa7.77□□□□□ -1.16
KLHL3-202ENST00000447439 ADH4P08319 380 aa7.77□□□□□ -1.16
KLHL3-202ENST00000447439 SAA2P0DJI9 122 aaPredicted RBP7.77□□□□□ -1.16
KLHL3-202ENST00000447439 HTD2P86397 168 aa7.77□□□□□ -1.16
KLHL3-202ENST00000447439 C17orf58Q2M2W7 97 aa7.77□□□□□ -1.16
KLHL3-202ENST00000447439 ACOT6Q3I5F7 207 aaPredicted RBP7.77□□□□□ -1.16
KLHL3-202ENST00000447439 LURAP1LQ8IV03 231 aa7.77□□□□□ -1.16
KLHL3-202ENST00000447439 PXMP4Q9Y6I8 212 aa7.77□□□□□ -1.16
KLHL3-202ENST00000447439 OTOGLQ3ZCN5 2332 aa7.77□□□□□ -1.17
KLHL3-202ENST00000447439 TRBV20OR9-2A0A075B6H5 130 aa7.77□□□□□ -1.17
KLHL3-202ENST00000447439 SCO2A0A1W2PP80 73 aa7.77□□□□□ -1.17
KLHL3-202ENST00000447439 PPP5D1E7EU14 171 aa7.77□□□□□ -1.17
KLHL3-202ENST00000447439 MGST3O14880 152 aa7.77□□□□□ -1.17
KLHL3-202ENST00000447439 TGOLN2O43493 480 aa7.77□□□□□ -1.17
KLHL3-202ENST00000447439 ACTL6BO94805 426 aa7.77□□□□□ -1.17
KLHL3-202ENST00000447439 MBP02144 154 aa7.77□□□□□ -1.17
KLHL3-202ENST00000447439 VDAC2P45880 294 aaPredicted RBP7.77□□□□□ -1.17
KLHL3-202ENST00000447439 ERVK-16P61578 105 aa7.77□□□□□ -1.17
KLHL3-202ENST00000447439 TCF23Q7RTU1 214 aa7.77□□□□□ -1.17
KLHL3-202ENST00000447439 C1orf162Q8NEQ5 155 aaPredicted RBP7.77□□□□□ -1.17
KLHL3-202ENST00000447439 RND1Q92730 232 aa7.77□□□□□ -1.17
KLHL3-202ENST00000447439 SEPSECSQ9HD40 501 aaKnown RBP7.77□□□□□ -1.17
KLHL3-202ENST00000447439 MANBALQ9NQG1 85 aa7.77□□□□□ -1.17
KLHL3-202ENST00000447439 SH3BGRL2Q9UJC5 107 aa7.77□□□□□ -1.17
KLHL3-202ENST00000447439 TCF19Q9Y242 345 aa7.77□□□□□ -1.17
KLHL3-202ENST00000447439 FAM215AQ9Y5M1 114 aa7.77□□□□□ -1.17
KLHL3-202ENST00000447439 PTPRBP23467 1997 aa7.77□□□□□ -1.17
KLHL3-202ENST00000447439 TMEM250H0YL14 139 aa7.76□□□□□ -1.17
KLHL3-202ENST00000447439 RBFOX2O43251 390 aaKnown RBP eCLIP7.76□□□□□ -1.17
KLHL3-202ENST00000447439 GATA2P23769 480 aaPredicted RBP7.76□□□□□ -1.17
KLHL3-202ENST00000447439 KLF3P57682 345 aaPredicted RBP7.76□□□□□ -1.17
KLHL3-202ENST00000447439 MLANAQ16655 118 aa7.76□□□□□ -1.17
KLHL3-202ENST00000447439 PDLIM3Q53GG5 364 aaPredicted RBP7.76□□□□□ -1.17
KLHL3-202ENST00000447439 ARSJQ5FYB0 599 aaPredicted RBP7.76□□□□□ -1.17
KLHL3-202ENST00000447439 ASPHD1Q5U4P2 390 aa7.76□□□□□ -1.17
KLHL3-202ENST00000447439 PIP4P1Q86T03 277 aa7.76□□□□□ -1.17
KLHL3-202ENST00000447439 GGTLC1Q9BX51 225 aa7.76□□□□□ -1.17
KLHL3-202ENST00000447439 CTDSP1Q9GZU7 261 aa7.76□□□□□ -1.17
KLHL3-202ENST00000447439 SRD5A3Q9H8P0 318 aa7.76□□□□□ -1.17
KLHL3-202ENST00000447439 DMRT1Q9Y5R6 373 aa7.76□□□□□ -1.17
KLHL3-202ENST00000447439 ROS1P08922 2347 aa7.76□□□□□ -1.17
KLHL3-202ENST00000447439 BSNQ9UPA5 3926 aa7.76□□□□□ -1.17
KLHL3-202ENST00000447439 TET2Q6N021 2002 aaPredicted RBP7.76□□□□□ -1.17
KLHL3-202ENST00000447439 AHRRA9YTQ3 701 aa7.76□□□□□ -1.17
KLHL3-202ENST00000447439 HRASP01112 189 aa7.76□□□□□ -1.17
KLHL3-202ENST00000447439 AMBPP02760 352 aa7.76□□□□□ -1.17
KLHL3-202ENST00000447439 SPCS3P61009 180 aa7.76□□□□□ -1.17
KLHL3-202ENST00000447439 IGFL2Q6UWQ7 119 aa7.76□□□□□ -1.17
KLHL3-202ENST00000447439 LINC01551Q86U37 167 aa7.76□□□□□ -1.17
KLHL3-202ENST00000447439 JPT1Q9UK76 154 aa7.76□□□□□ -1.17
KLHL3-202ENST00000447439 YTHDF2Q9Y5A9 579 aaKnown RBP7.76□□□□□ -1.17
KLHL3-202ENST00000447439 HCFC1P51610 2035 aa7.76□□□□□ -1.17
KLHL3-202ENST00000447439 GVINP1Q7Z2Y8 2422 aa7.76□□□□□ -1.17
KLHL3-202ENST00000447439 IGKV1-16P04430 117 aa7.75□□□□□ -1.17
KLHL3-202ENST00000447439 OR4A47Q6IF82 309 aa7.75□□□□□ -1.17
KLHL3-202ENST00000447439 TCTEX1D1Q8N7M0 179 aa7.75□□□□□ -1.17
KLHL3-202ENST00000447439 ELOA3CA0A087WX78 387 aaPredicted RBP7.75□□□□□ -1.17
KLHL3-202ENST00000447439 ZNF891A8MT65 544 aaPredicted RBP7.75□□□□□ -1.17
KLHL3-202ENST00000447439 PRSS46E5RG02 174 aa7.75□□□□□ -1.17
KLHL3-202ENST00000447439 YPEL1O60688 119 aa7.75□□□□□ -1.17
KLHL3-202ENST00000447439 CA2P00918 260 aa7.75□□□□□ -1.17
KLHL3-202ENST00000447439 SNRPCP09234 159 aaKnown RBP7.75□□□□□ -1.17
KLHL3-202ENST00000447439 IGFBP2P18065 325 aa7.75□□□□□ -1.17
KLHL3-202ENST00000447439 CCL8P80075 99 aa7.75□□□□□ -1.17
KLHL3-202ENST00000447439 OR2T10Q8NGZ9 312 aa7.75□□□□□ -1.17
KLHL3-202ENST00000447439 YPEL2Q96QA6 119 aa7.75□□□□□ -1.17
KLHL3-202ENST00000447439 SPTBN2O15020 2390 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms