RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 CXCL10P02778 98 aa6.72□□□□□ -1.33
SMG1-202ENST00000446231 COL8A1P27658 744 aa6.72□□□□□ -1.33
SMG1-202ENST00000446231 LYG1Q8N1E2 194 aa6.72□□□□□ -1.33
SMG1-202ENST00000446231 ZNF646O15015 1829 aaPredicted RBP6.72□□□□□ -1.33
SMG1-202ENST00000446231 LMO7DNF2Z398 122 aa6.72□□□□□ -1.33
SMG1-202ENST00000446231 CFPP27918 469 aa6.72□□□□□ -1.33
SMG1-202ENST00000446231 SCGB1D4Q6XE38 83 aa6.72□□□□□ -1.33
SMG1-202ENST00000446231 AGBL5Q8NDL9 886 aa6.72□□□□□ -1.33
SMG1-202ENST00000446231 ODAMA1E959 279 aa6.72□□□□□ -1.33
SMG1-202ENST00000446231 LYZP61626 148 aa6.72□□□□□ -1.33
SMG1-202ENST00000446231 CEACAM21Q3KPI0 293 aa6.72□□□□□ -1.33
SMG1-202ENST00000446231 C9orf50Q5SZB4 431 aa6.72□□□□□ -1.33
SMG1-202ENST00000446231 SLC35E4Q6ICL7 350 aa6.72□□□□□ -1.33
SMG1-202ENST00000446231 STPG4Q8N801 248 aa6.72□□□□□ -1.33
SMG1-202ENST00000446231 PLPPR2Q96GM1 343 aa6.72□□□□□ -1.33
SMG1-202ENST00000446231 MTCL1Q9Y4B5 1905 aaKnown RBP6.72□□□□□ -1.33
SMG1-202ENST00000446231 CLEC5AQ9NY25 188 aa6.72□□□□□ -1.33
SMG1-202ENST00000446231 CELA2BP08218 269 aaPredicted RBP6.72□□□□□ -1.33
SMG1-202ENST00000446231 DCAF12Q5T6F0 453 aa6.72□□□□□ -1.33
SMG1-202ENST00000446231 ANAPC13Q9BS18 74 aa6.72□□□□□ -1.33
SMG1-202ENST00000446231 SSBP3Q9BWW4 388 aaPredicted RBP6.72□□□□□ -1.33
SMG1-202ENST00000446231 IGHV3-43A0A0B4J1X8 118 aa6.72□□□□□ -1.33
SMG1-202ENST00000446231 IGHV3-43DP0DP04 118 aa6.72□□□□□ -1.33
SMG1-202ENST00000446231 FGF12P61328 243 aa6.72□□□□□ -1.33
SMG1-202ENST00000446231 CSRP2Q16527 193 aa6.72□□□□□ -1.33
SMG1-202ENST00000446231 DEFB108BQ8NET1 73 aa6.72□□□□□ -1.33
SMG1-202ENST00000446231 C5orf30Q96GV9 206 aa6.72□□□□□ -1.33
SMG1-202ENST00000446231 ZNF385AQ96PM9 386 aaKnown RBP6.72□□□□□ -1.33
SMG1-202ENST00000446231 GPR6P46095 362 aaPredicted RBP6.72□□□□□ -1.33
SMG1-202ENST00000446231 HERVK_113P61574 105 aa6.72□□□□□ -1.33
SMG1-202ENST00000446231 VSIRQ9H7M9 311 aa6.72□□□□□ -1.33
SMG1-202ENST00000446231 UFC1Q9Y3C8 167 aa6.72□□□□□ -1.33
SMG1-202ENST00000446231 FZR1Q9UM11 496 aa6.72□□□□□ -1.33
SMG1-202ENST00000446231 C1QTNF9BB2RNN3 333 aa6.72□□□□□ -1.33
SMG1-202ENST00000446231 TEPPQ6URK8 271 aa6.72□□□□□ -1.33
SMG1-202ENST00000446231 NFAM1Q8NET5 270 aaPredicted RBP6.72□□□□□ -1.33
SMG1-202ENST00000446231 SF3B5Q9BWJ5 86 aaKnown RBP6.72□□□□□ -1.33
SMG1-202ENST00000446231 A0A0G2JLM5 398 aa6.71□□□□□ -1.33
SMG1-202ENST00000446231 CCL25O15444 150 aa6.71□□□□□ -1.33
SMG1-202ENST00000446231 UCP2P55851 309 aa6.71□□□□□ -1.33
SMG1-202ENST00000446231 SFTPA2Q8IWL1 248 aa6.71□□□□□ -1.33
SMG1-202ENST00000446231 KCNK17Q96T54 332 aa6.71□□□□□ -1.33
SMG1-202ENST00000446231 AP5S1Q9NUS5 200 aa6.71□□□□□ -1.33
SMG1-202ENST00000446231 NRAPQ86VF7 1730 aa6.71□□□□□ -1.33
SMG1-202ENST00000446231 TMEM238LA0A1B0GVL6 79 aa6.71□□□□□ -1.33
SMG1-202ENST00000446231 A6NJY4 79 aa6.71□□□□□ -1.33
SMG1-202ENST00000446231 RBP4P02753 201 aa6.71□□□□□ -1.33
SMG1-202ENST00000446231 SPSB3Q6PJ21 355 aa6.71□□□□□ -1.33
SMG1-202ENST00000446231 SCO2A0A1W2PP80 73 aa6.71□□□□□ -1.33
SMG1-202ENST00000446231 TNFRSF14Q92956 283 aa6.71□□□□□ -1.33
SMG1-202ENST00000446231 OR2J3O76001 311 aa6.71□□□□□ -1.33
SMG1-202ENST00000446231 CTHRC1Q96CG8 243 aa6.71□□□□□ -1.33
SMG1-202ENST00000446231 PERPQ96FX8 193 aa6.71□□□□□ -1.33
SMG1-202ENST00000446231 DUSP23Q9BVJ7 150 aa6.71□□□□□ -1.33
SMG1-202ENST00000446231 MTORP42345 2549 aa6.71□□□□□ -1.33
SMG1-202ENST00000446231 M0R296 226 aa6.71□□□□□ -1.34
SMG1-202ENST00000446231 PLPPR1Q8TBJ4 325 aa6.71□□□□□ -1.34
SMG1-202ENST00000446231 MYOZ3Q8TDC0 251 aa6.71□□□□□ -1.34
SMG1-202ENST00000446231 ATP23Q9Y6H3 246 aa6.71□□□□□ -1.34
SMG1-202ENST00000446231 CD5LO43866 347 aa6.71□□□□□ -1.34
SMG1-202ENST00000446231 FAM90A2PQ658T7 463 aa6.71□□□□□ -1.34
SMG1-202ENST00000446231 K7EP13 123 aa6.71□□□□□ -1.34
SMG1-202ENST00000446231 ZFAND6Q6FIF0 208 aa6.71□□□□□ -1.34
SMG1-202ENST00000446231 FER1L6-AS1Q8NA97 138 aa6.71□□□□□ -1.34
SMG1-202ENST00000446231 PEX7O00628 323 aa6.71□□□□□ -1.34
SMG1-202ENST00000446231 SNCGO76070 127 aa6.71□□□□□ -1.34
SMG1-202ENST00000446231 CA1P00915 261 aaPredicted RBP6.71□□□□□ -1.34
SMG1-202ENST00000446231 LINC01551Q86U37 167 aa6.71□□□□□ -1.34
SMG1-202ENST00000446231 ZNF488Q96MN9 340 aa6.71□□□□□ -1.34
SMG1-202ENST00000446231 GNB1LQ9BYB4 327 aa6.71□□□□□ -1.34
SMG1-202ENST00000446231 FAM231BA6NCW3 169 aa6.71□□□□□ -1.34
SMG1-202ENST00000446231 IGHV5-51A0A0C4DH38 117 aa6.71□□□□□ -1.34
SMG1-202ENST00000446231 hADV38S2A0JD32 116 aa6.71□□□□□ -1.34
SMG1-202ENST00000446231 ABHD3Q8WU67 409 aa6.71□□□□□ -1.34
SMG1-202ENST00000446231 RPP21Q9H633 154 aaKnown RBP6.71□□□□□ -1.34
SMG1-202ENST00000446231 EGR4Q05215 589 aa6.71□□□□□ -1.34
SMG1-202ENST00000446231 OR10J3Q5JRS4 329 aa6.71□□□□□ -1.34
SMG1-202ENST00000446231 COA6Q5JTJ3 125 aaKnown RBP6.71□□□□□ -1.34
SMG1-202ENST00000446231 LYPD6BQ8NI32 183 aa6.71□□□□□ -1.34
SMG1-202ENST00000446231 ACP1P24666 158 aa6.71□□□□□ -1.34
SMG1-202ENST00000446231 MS4A6AQ9H2W1 248 aa6.71□□□□□ -1.34
SMG1-202ENST00000446231 TM4SF20Q53R12 229 aa6.7□□□□□ -1.34
SMG1-202ENST00000446231 ZNF256Q9Y2P7 627 aaPredicted RBP6.7□□□□□ -1.34
SMG1-202ENST00000446231 ADAMTS7Q9UKP4 1686 aa6.7□□□□□ -1.34
SMG1-202ENST00000446231 C19orf67A6NJJ6 358 aa6.7□□□□□ -1.34
SMG1-202ENST00000446231 RNPS1Q15287 305 aaKnown RBP6.7□□□□□ -1.34
SMG1-202ENST00000446231 SPTY2D1-AS1A0A0U1RR47 76 aa6.7□□□□□ -1.34
SMG1-202ENST00000446231 HES3Q5TGS1 186 aa6.7□□□□□ -1.34
SMG1-202ENST00000446231 A0A087X0K7 114 aa6.7□□□□□ -1.34
SMG1-202ENST00000446231 ORM1P02763 201 aa6.7□□□□□ -1.34
SMG1-202ENST00000446231 IL6RP08887 468 aaPredicted RBP6.7□□□□□ -1.34
SMG1-202ENST00000446231 CCL1P22362 96 aa6.7□□□□□ -1.34
SMG1-202ENST00000446231 VMA21Q3ZAQ7 101 aa6.7□□□□□ -1.34
SMG1-202ENST00000446231 FAM131CQ96AQ9 280 aa6.7□□□□□ -1.34
SMG1-202ENST00000446231 A0A1B0GW15 77 aa6.7□□□□□ -1.34
SMG1-202ENST00000446231 HIST1H1AQ02539 215 aaPredicted RBP6.7□□□□□ -1.34
SMG1-202ENST00000446231 NMSQ5H8A3 153 aa6.7□□□□□ -1.34
SMG1-202ENST00000446231 OR1N2Q8NGR9 330 aa6.7□□□□□ -1.34
SMG1-202ENST00000446231 SPINK2P20155 84 aa6.7□□□□□ -1.34
SMG1-202ENST00000446231 RAC3P60763 192 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms