RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 MOB3AQ96BX8 217 aa11.36□□□□□ -0.59
USE1-202ENST00000445667 SPIN2AQ99865 258 aa11.36□□□□□ -0.59
USE1-202ENST00000445667 SPIN2BQ9BPZ2 258 aa11.36□□□□□ -0.59
USE1-202ENST00000445667 ZMAT5Q9UDW3 170 aaKnown RBP11.36□□□□□ -0.59
USE1-202ENST00000445667 SAP30O75446 220 aa11.35□□□□□ -0.59
USE1-202ENST00000445667 BRI3O95415 125 aa11.35□□□□□ -0.59
USE1-202ENST00000445667 IL6RP08887 468 aaPredicted RBP11.35□□□□□ -0.59
USE1-202ENST00000445667 MYOD1P15172 320 aa11.35□□□□□ -0.59
USE1-202ENST00000445667 CATR1Q13166 79 aa11.35□□□□□ -0.59
USE1-202ENST00000445667 RNASE12Q5GAN4 147 aaKnown RBP11.35□□□□□ -0.59
USE1-202ENST00000445667 AADACL3Q5VUY0 350 aa11.35□□□□□ -0.59
USE1-202ENST00000445667 OR6F1Q8NGZ6 308 aa11.35□□□□□ -0.59
USE1-202ENST00000445667 FYTTD1Q96QD9 318 aaKnown RBP11.35□□□□□ -0.59
USE1-202ENST00000445667 RANGRFQ9HD47 186 aaPredicted RBP11.35□□□□□ -0.59
USE1-202ENST00000445667 A0A1B0GW64 132 aa11.34□□□□□ -0.59
USE1-202ENST00000445667 TEX22C9J3V5 150 aa11.34□□□□□ -0.59
USE1-202ENST00000445667 RBFOX2O43251 390 aaKnown RBP eCLIP11.34□□□□□ -0.59
USE1-202ENST00000445667 PGLYRP1O75594 196 aaPredicted RBP11.34□□□□□ -0.59
USE1-202ENST00000445667 HPRT1P00492 218 aa11.34□□□□□ -0.59
USE1-202ENST00000445667 RPL27AP46776 148 aaKnown RBP11.34□□□□□ -0.59
USE1-202ENST00000445667 INSL3P51460 131 aa11.34□□□□□ -0.59
USE1-202ENST00000445667 TSPAN5P62079 268 aa11.34□□□□□ -0.59
USE1-202ENST00000445667 ZNF45Q02386 682 aa11.34□□□□□ -0.59
USE1-202ENST00000445667 SPCS2Q15005 226 aa11.34□□□□□ -0.59
USE1-202ENST00000445667 OR4A47Q6IF82 309 aa11.34□□□□□ -0.59
USE1-202ENST00000445667 ACSM6Q6P461 480 aa11.34□□□□□ -0.59
USE1-202ENST00000445667 CLVS1Q8IUQ0 354 aaPredicted RBP11.34□□□□□ -0.59
USE1-202ENST00000445667 TTC9CQ8N5M4 171 aa11.34□□□□□ -0.59
USE1-202ENST00000445667 AP3S1Q92572 193 aa11.34□□□□□ -0.59
USE1-202ENST00000445667 FXYD6Q9H0Q3 95 aa11.34□□□□□ -0.59
USE1-202ENST00000445667 SCPEP1Q9HB40 452 aa11.34□□□□□ -0.59
USE1-202ENST00000445667 ADAM30Q9UKF2 790 aa11.34□□□□□ -0.59
USE1-202ENST00000445667 TNCP24821 2201 aa11.33□□□□□ -0.59
USE1-202ENST00000445667 TRAV3A0A0B4J244 114 aa11.33□□□□□ -0.6
USE1-202ENST00000445667 S1PR2O95136 353 aa11.33□□□□□ -0.6
USE1-202ENST00000445667 TRBV12-3P01733 135 aa11.33□□□□□ -0.6
USE1-202ENST00000445667 RLN1P04808 185 aa11.33□□□□□ -0.6
USE1-202ENST00000445667 RPA2P15927 270 aa11.33□□□□□ -0.6
USE1-202ENST00000445667 MAS1LP35410 378 aa11.33□□□□□ -0.6
USE1-202ENST00000445667 RPL8P62917 257 aaKnown RBP11.33□□□□□ -0.6
USE1-202ENST00000445667 RHOGP84095 191 aa11.33□□□□□ -0.6
USE1-202ENST00000445667 ZNF343Q6P1L6 599 aa11.33□□□□□ -0.6
USE1-202ENST00000445667 C19orf35Q6ZS72 473 aa11.33□□□□□ -0.6
USE1-202ENST00000445667 ZNF429Q86V71 674 aa11.33□□□□□ -0.6
USE1-202ENST00000445667 BORCS5Q969J3 196 aa11.33□□□□□ -0.6
USE1-202ENST00000445667 USMG5Q96IX5 58 aa11.33□□□□□ -0.6
USE1-202ENST00000445667 HRASLSQ9HDD0 168 aa11.33□□□□□ -0.6
USE1-202ENST00000445667 AKIP1Q9NQ31 210 aa11.33□□□□□ -0.6
USE1-202ENST00000445667 BET1LQ9NYM9 111 aa11.33□□□□□ -0.6
USE1-202ENST00000445667 EXTL2Q9UBQ6 330 aa11.33□□□□□ -0.6
USE1-202ENST00000445667 M0QYG6 137 aa11.32□□□□□ -0.6
USE1-202ENST00000445667 LY86O95711 162 aa11.32□□□□□ -0.6
USE1-202ENST00000445667 ZNF735P0CB33 412 aa11.32□□□□□ -0.6
USE1-202ENST00000445667 RCVRNP35243 200 aa11.32□□□□□ -0.6
USE1-202ENST00000445667 TAS2R31P59538 309 aa11.32□□□□□ -0.6
USE1-202ENST00000445667 DMBX1Q8NFW5 382 aa11.32□□□□□ -0.6
USE1-202ENST00000445667 AIFM2Q9BRQ8 373 aa11.32□□□□□ -0.6
USE1-202ENST00000445667 MIXL1Q9H2W2 232 aa11.32□□□□□ -0.6
USE1-202ENST00000445667 PEF1Q9UBV8 284 aaKnown RBP11.32□□□□□ -0.6
USE1-202ENST00000445667 KLK11Q9UBX7 282 aa11.32□□□□□ -0.6
USE1-202ENST00000445667 ZNF256Q9Y2P7 627 aaPredicted RBP11.32□□□□□ -0.6
USE1-202ENST00000445667 TRBV9A0A0B4J1U6 114 aa11.31□□□□□ -0.6
USE1-202ENST00000445667 DPPA5A6NC42 116 aa11.31□□□□□ -0.6
USE1-202ENST00000445667 GPR31O00270 319 aa11.31□□□□□ -0.6
USE1-202ENST00000445667 UPK2O00526 184 aa11.31□□□□□ -0.6
USE1-202ENST00000445667 CTDSP2O14595 271 aa11.31□□□□□ -0.6
USE1-202ENST00000445667 OR2J3O76001 311 aa11.31□□□□□ -0.6
USE1-202ENST00000445667 AREGP15514 252 aa11.31□□□□□ -0.6
USE1-202ENST00000445667 NQO2P16083 231 aa11.31□□□□□ -0.6
USE1-202ENST00000445667 HLA-GP17693 338 aa11.31□□□□□ -0.6
USE1-202ENST00000445667 ZP3P21754 424 aa11.31□□□□□ -0.6
USE1-202ENST00000445667 F2RP25116 425 aa11.31□□□□□ -0.6
USE1-202ENST00000445667 LPAR6P43657 344 aa11.31□□□□□ -0.6
USE1-202ENST00000445667 ATP5G2Q06055 141 aa11.31□□□□□ -0.6
USE1-202ENST00000445667 KLF5Q13887 457 aaPredicted RBP11.31□□□□□ -0.6
USE1-202ENST00000445667 POU2AF1Q16633 256 aa11.31□□□□□ -0.6
USE1-202ENST00000445667 PHLDA2Q53GA4 152 aa11.31□□□□□ -0.6
USE1-202ENST00000445667 SLC25A42Q86VD7 318 aa11.31□□□□□ -0.6
USE1-202ENST00000445667 CMTM1Q8IZ96 169 aa11.31□□□□□ -0.6
USE1-202ENST00000445667 OR52I2Q8NH67 350 aa11.31□□□□□ -0.6
USE1-202ENST00000445667 OR4A5Q8NH83 315 aa11.31□□□□□ -0.6
USE1-202ENST00000445667 CD300LFQ8TDQ1 290 aa11.31□□□□□ -0.6
USE1-202ENST00000445667 OR4C12Q96R67 309 aa11.31□□□□□ -0.6
USE1-202ENST00000445667 ABHD1Q96SE0 405 aa11.31□□□□□ -0.6
USE1-202ENST00000445667 PLEKHA2Q9HB19 425 aa11.31□□□□□ -0.6
USE1-202ENST00000445667 SLC2A9Q9NRM0 540 aa11.31□□□□□ -0.6
USE1-202ENST00000445667 TMEM140Q9NV12 185 aa11.31□□□□□ -0.6
USE1-202ENST00000445667 LSM4Q9Y4Z0 139 aaKnown RBP11.31□□□□□ -0.6
USE1-202ENST00000445667 CGB1A6NKQ9 187 aa11.3□□□□□ -0.6
USE1-202ENST00000445667 FAM223BA6NKX1 122 aa11.3□□□□□ -0.6
USE1-202ENST00000445667 NPIPB5A8MRT5 1133 aa11.3□□□□□ -0.6
USE1-202ENST00000445667 RGS5O15539 181 aa11.3□□□□□ -0.6
USE1-202ENST00000445667 REG1AP05451 166 aa11.3□□□□□ -0.6
USE1-202ENST00000445667 SPNP16150 400 aa11.3□□□□□ -0.6
USE1-202ENST00000445667 SYNJ2BPP57105 145 aa11.3□□□□□ -0.6
USE1-202ENST00000445667 CD69Q07108 199 aa11.3□□□□□ -0.6
USE1-202ENST00000445667 EXOSC2Q13868 293 aaKnown RBP11.3□□□□□ -0.6
USE1-202ENST00000445667 ZNF585BQ52M93 769 aa11.3□□□□□ -0.6
USE1-202ENST00000445667 HAPLN4Q86UW8 402 aa11.3□□□□□ -0.6
USE1-202ENST00000445667 FAM223AQ8IWN6 122 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms